Caloenas nicobarica (Nicobar pigeon): 135995183
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Entry
135995183 CDS
T11056
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
135995183 (TFIP11)
Spliceosome [BR:
cnic03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
135995183 (TFIP11)
Other components
Complex C specific factors
135995183 (TFIP11)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
135995183
NCBI-ProteinID:
XP_065502376
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All DBs
Position
16:complement(6575768..6584584)
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGEDGVEMENFEVSDWDLQNEFNPHRQRHRQSKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVNFISAGLKKSAAEDMSEEDSDEDEKPIKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGTKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYNYKTVE
ELKAKGRINKKLSAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDA
KPQGFALPELEHNLQLLIDITEQEIIQNDRQLQYERDMVVNLTHEIQKMSEVLSHEETAI
SNLSKVLEMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKDYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHGGQDLSTDAFHRLMWEIWMPYVR
NIVAQWQPRNCGSMVDFLDSWVNVVPVWILENILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcacggacggggaggatggcgtggagatggagaacttc
gaggtgtccgactgggacctgcagaacgagttcaacccccaccggcagcggcaccggcag
agcaaggaggaggcgacctacggcgtgtgggccgagcgcgactcggacgaggagcggccc
agcttcggcggcaagcgctccagagattactcggcccccgtgaacttcatcagcgccggg
ctgaaaaagtcagctgctgaggatatgtcagaggaagactccgatgaagatgaaaagccc
attaagcaggaagaaatccctaaagagtttgtgccaaagaagctaaaaacaggtggtaat
ttcaagcctagtcagaaaggctttgtaggggggacaaaatcttttgtggattttggcagc
tgggagagacatacaaaaggaattgggcagaagcttctccagaagatgggttacgtccct
ggaagaggtcttgggaagaatgcgcaaggaatcatcaatccaattgaggccaaacaaaga
aaaggtaaaggagctgtgggggcttatggctccgaaagaaccagccagtctttgcaagac
ttcccggtggtggactcggaggaagaagctgaggaggaatttcaaaaagagctgagccag
tggcggaaggatccgaatggaggcaagaaaaagcccaagtacaactataagacggtggaa
gaactgaaagccaagggcaggatcaacaagaagctctcagccccacagaaggagctgtcg
caggtcaaggttatagacatgacgggccgggaacagaaggtttattacagctacagtcag
atcagccataagcacaacatcccagacgacagcccgcagcagccgctgggcaaggacgcc
aagccccagggcttcgccttgcccgagctggagcacaacctgcagcttctcatcgacatc
acggagcaggagatcatccagaatgaccggcaactgcagtacgagagggacatggttgtc
aacctgacccacgagatacaaaagatgtccgaagtcctctcgcacgaggagacggcgatt
agcaacctcagcaaggtgctggagatggtggaggagtgcgaaagacggatgcagcctggc
tgtgaaaatcccttaaccttggatgagtgtgcaaagatttttgagacacttcaagacaag
tactatgaggagtacaggatgtctgatcgggtggacctggcagtagcgatagtttatccg
ctcatgaaagattacttcaagaactgggatcccctcaaggactgtacatatggcacagag
atcatagccaagtggaagagccttttggaaaatgatcagctgttgtcgcacggtgggcag
gacctgtcgacagatgcttttcacagactgatgtgggaaatctggatgccgtatgtcaga
aatatagtggcgcagtggcaaccaaggaactgcgggtccatggtggatttcctggacagc
tgggtaaatgttgttcctgtctggattctggagaacattctggatcagctcatcttcccc
aagttacagaaagaggtcgaaagctggaatcctttgacagacacagtcccaatccactct
tggatccacccctggctgcccctgatgcaggcgcgcctggagccgctgtattcccccatc
cggaacaagctggccaatgcgctgcagaagtggcacccgagcgactcctccgccaagctc
atcctgcagccctggaaagatgtgttcacacctggctcgtgggaggctttcatggtcaaa
aacatcgtgcctaaactggggatgtgtctgaatgaactcatcataaaccctcaccagcag
cacatggatgccttctactgggtgattgactgggaggggatgatttctgtctccagtctg
gttgggctgctggagaaacacttcttcccaaagtggctgcaggtgctgtgctcttggctc
agtaacagccccaattatgaagagattacaaagtggtacttgggttggaagtccatgttc
tcagaccaagtgttagcacatccatcaatcaaagacaaatttaatgaagctcttgatatc
atgaaccgggctgtgtcttccagtgttggtgggtacatgcagccaggcgctcgggagaac
atcgcctacctcacccacaccgagcggaggaaggacttccagtacgaggccatgcaggag
cggcgggaggccgagaacatggcccagcgtggcatcggtgtggctgccagctctgtgccc
atgaacttcaaggacttaattcagacaaaagcagaggagcacaacattgttttcatgcct
gtgattgggaagcggcacgaagggaagcagttgtacacatttggacggattgtcatttac
attgaccgaggcgtcgtgtttgtacaaggagaaaagacttgggtgccaacctccctgcag
agcctcatcgacatggccaagtga
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