Caloenas nicobarica (Nicobar pigeon): 135995357
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Entry
135995357 CDS
T11056
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1
KO
K13885
scavenger receptor class B, member 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03272
Virion - Hepatitis viruses
cnic04145
Phagosome
cnic04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
135995357 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135995357 (SCARB1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
135995357 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135995357 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
135995357 (SCARB1)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Phagocytosis
Scavenger receptors
135995357 (SCARB1)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135995357 (SCARB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
ANM3_C2H2_Zf
PorA
Motif
Other DBs
NCBI-GeneID:
135995357
NCBI-ProteinID:
XP_065502691
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All DBs
Position
16:3452086..3472982
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AA seq
504 aa
AA seq
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MAVARRRVSLGLGVAGAACALLGVCVLVVGPVIVKDQVVKNVRIDPSSISFSMWKDIPVP
FYLSVHFFEVLNPEEVLQGAKPVLNERGPYVYREYRYKTNITFHDNDTVSFLEYRRLFFQ
PDLSNGREEDYIVVPNIMLMGAAVMMENLPSFVKIMLSGVLAGLKQEAFMNRTVGEIMWG
YDDPLVDAINAIIPGLIPFKGKFGLFIEFNSSHSGLFTVDTGMKNISRVHMVDTWNGLKM
VNYWRSKECNMINGTAGEMWPPFMSPTSLEFYSPDACRSMTLVYEQSGKFQGVPTYRFVA
PKTLFANGTEYPPNEGFCPCMQSGILNVSTCRHDAPMFISHPHFYNADPSLLNAVEGLHP
SKDKHGLFLDIHPMTGIPMNCSIKLQLNLYIKQVVGIMQTGKIKPVVLPLLWFGESGHIE
GSVLEQFYTSLVLIPSVLEYLQYIFLGLSVPLIVSAVVLLAMSQRTATEKSPSHPTTPSE
PPPSSETTPLLRDTGTLSPDNDDA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggctcggcgcagggtgtcgctggggctgggggtggccggggcggcctgcgcc
ctgctgggggtctgtgtgctggtggtggggcccgtcatcgtcaaggatcaggtcgtcaag
aatgtcaggattgaccccagcagcatctccttcagcatgtggaaagacattcccgttcct
ttctacctgtcggtgcacttctttgaagtgctgaaccccgaggaggtccttcagggagcg
aagccggtgctgaacgagcgtggaccctacgtttacagagagtacaggtataaaacaaat
atcacattccatgacaatgacacagtctctttcctggagtaccggagactcttcttccag
ccggacttgtccaacggtagagaagaagactacattgttgtgccaaacattatgttgatg
ggagcagctgtaatgatggaaaacctgccaagctttgtgaagattatgctaagtggagtc
ttggctggcctgaaacaggaggcgttcatgaaccgtacagtgggggagatcatgtggggg
tatgacgaccctcttgtagacgcaataaacgcgattattcccggcctcatccctttcaag
gggaaatttggcttatttatagagtttaacagctcccattcaggactgttcacagtggac
acaggcatgaagaacatcagcagagttcacatggtggatacatggaatggactaaagatg
gtgaactactggcggagcaaggagtgcaacatgatcaatgggacagcaggggagatgtgg
ccaccgttcatgtccccaacgtcgctggagttctacagccctgatgcctgcagatccatg
acactggtgtacgagcagtcggggaagttccagggtgtgcccacctatcgcttcgtggca
cccaaaaccctctttgccaatggcacagagtatccacccaacgagggcttctgcccctgc
atgcagtccggcatcctgaacgtcagtacctgcaggcacgatgcaccgatgttcatttcc
catcctcacttctacaacgccgacccaagcctgctgaacgctgtggaaggtctgcacccc
agcaaggacaagcatggtctcttccttgacatccacccgatgacaggcatccccatgaat
tgttccatcaagctccagctgaacctgtacataaagcaggtggttggtatcatgcaaacg
gggaagattaagccggtggtcctgccgcttctgtggtttggagagagcggacacatcgaa
ggctccgtcctggagcagttttacaccagcctggtgctgatcccatctgtgctggaatac
ctgcagtatatcttccttgggctgagtgtcccgctcattgtctcagcagttgtactcctg
gcaatgagtcagagaaccgccaccgagaagagcccaagccaccccaccacgccgagcgaa
ccgcccccttcctccgagacaacgccactcctgcgcgacaccggcacgctgagcccggac
aacgatgacgcctga
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