Caloenas nicobarica (Nicobar pigeon): 135995460
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Entry
135995460 CDS
T11056
Symbol
DEPDC5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
135995460 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135995460 (DEPDC5)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
135995460 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
135995460
NCBI-ProteinID:
XP_065502857
LinkDB
All DBs
Position
16:complement(10108173..10157339)
Genome browser
AA seq
1606 aa
AA seq
DB search
MQDAFSGFYSKQLRRTGIQDENEQDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQV
KSLKEDLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMW
RLKKSLVSTCAYVTQKVEFAGIRAQAGELWVKNEKVTCGYISEDTRVVFRSTSAMVYIFI
QMSCEMWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFP
ETHRASIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPP
GYNSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQ
RMIDNGIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRLCDDYNIPHWINHSFYTSKSQLL
CNSFTPRIKLAGRKPLTEKAKNNRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPSRA
QRCTTFSRSVRERESRTRKSSSSYDVSCSPSLQSRTLPSEEVRSQASDDSSLGKISNILM
IPRPHLHQCEVSSSLGYTSTRDVLENMLEAQQRDSSAPGRFHVGSAESMLHIRPGGYTPQ
RALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMVEMQGSGQQDLTHS
SAELLELAYHEATGRHVSSRHPGDGASFLSFSGTEEFSNGLAGGNGAGMNLKTQNKDSFE
DAVSNSPDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGC
YDLLPEADMDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQSKPQKPAATVPPPLSSSP
LYSRGLVSRNRPEEEDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCP
SHSDSEFVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLTESLKFWRTRFLLLPACIS
ATKRIMEGEVHCDVYGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKG
LQIAGPIPTHSLEQPGPPIGKKGTSALSALLQMEASQKTLGEQQAAMLAGKSSGPSESGS
IAITPTYMDSPRKDGAFFMDFVRSPRTTSTFYSQVSVDQSVPATSEGNTLINQGQLPDRG
NTQTLGSSQSVTDQGYPTAGAAEAGSQQCSASTLTSSSTLIEILEAMKHPTTGIQLLSEQ
KGLSPYCFISAEVVHWLVNNVEGVQTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYF
YKIVVDKEPDRVGMQQPAMWHTAAVDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPS
RPASYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNF
SLNAAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQ
LFIPLNVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIAYRFGFVQDKYSASAFNFPAEN
KPQYIHVTGTVFLQLPYSKRKFSCGQQRRRRNSTSSTNQNMFCEERIGYNWAYNTMLTKT
WRSSATGDEKFADRLLKDFTDFCWNKDSRLVLFWTDCLDKMHASAP
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatgccttcagtggtttttactcaaagcagctgagaagaactggaattcaagat
gagaacgaacaagatgatgaactggtggtgaatcctaaagtatttcttcaaatcaagctg
ggggatgttgtggaaattgcacatcccaatgatgaatacagtcccctgctgctccaagtg
aagtcacttaaggaagatttgcagaaagaaactataagtgtggatcagacagttgcacaa
gtgttccgactgcggccgtaccaggatgtccatgttaacgttgttgacccaaaggaggtg
accttggacttggtggagctgacctttaaagatcagtatattgggcgtggggatatgtgg
cgactgaagaaaagtttggtcagcacatgtgcatatgtcacccaaaaagttgaatttgcg
ggtatcagggcgcaggcaggtgaactgtgggtcaagaatgagaaagtcacttgtggatac
atcagtgaggatacccgggtggtcttccgctccacttctgccatggtttatatttttatc
cagatgagctgtgaaatgtgggattttgatatttatggggacctatactttgagaaagct
gtgaacggtttccttgctgacctcttcacaaaatggaaggagaagaattgcagccatgaa
gtgacagtggttctattttctagaacgttttatgaagcaaaatctatagatgagtttcct
gaaacgcatcgtgcatcaattcggcaggatcacgagggcagattttatgaagatttttac
aaagttgtagttcagaatgagagacgagaagagtggacatcattgcttgtgaccattaaa
aagcttttcatccagtatcctgtgttggtacgactagagcaagcagagggatttcctcca
ggttacaattctacctcagcacaagggaactacctggaggccataaatctttcattcaat
gtgtttgacaagcattacataaaccggaactttgatcggactggccagatgtctgtggtt
atcacacctggtgtgggtgtatttgaagttgatcgactccttatgattctaaccaagcag
cggatgatagacaatggaataggtgtggacttggtgtgcatgggagaacaaccattgcat
gctgtaccactctttaagctccataatcgctgtggacctggcgattccagactctgtgat
gactacaatattccacactggataaaccatagtttctacacatccaaaagccagctcctg
tgcaacagcttcactccacggatcaagctggcaggaaggaaaccactgactgagaaagca
aaaaataaccgagatgcctcattaggggctccaaaagatgctgagaatgccttgcccatc
caggtggattatgatggctacgatgctcaggtgttcagactgccaggcccctccagagcc
cagcgctgtaccacgttcagcaggtctgtgagggagagagaaagtcgcaccagaaagagc
tccagttcctacgacgtctcgtgcagcccgtccctgcagagccgcacgctgccctcggag
gaggtgaggagccaggcttctgacgacagctcgctgggcaagatctccaacatcctgatg
atcccacggcctcatctgcaccagtgtgaagtcagcagctccttgggctataccagcacc
agagatgtccttgagaacatgctggaggctcagcaacgtgactccagtgcccctgggagg
ttccatgttggcagcgcagaatccatgctgcacattcggccggggggatacacaccccag
cgagcgctgatcaacccgtttgccccgtcccgcatgcccatgaagctgacgtcaaacagg
aggcgttggatgcacacgtttcctgtgggtccatcaggagaagcaatccagatccatcac
caaacccgtcagaacatggtggagatgcagggcagcgggcagcaggatctgacgcattcc
tctgctgagctgctggagctggcttaccacgaggccacgggcagacatgtcagctctcgg
catccaggtgacggtgcttctttcctgagcttcagtgggacagaagagttctccaacggt
ctggcgggtggcaacggtgcagggatgaacctcaaaacccagaacaaggattcctttgaa
gatgccgtctctaactctccagatccaattctgacgctgtctgctccccccgtagtgcca
ggcttctgttgcacagtcggagtggactggaaatcccttactactccggcatgtctcccg
ctcaccacggactacttccccgaccggcagagcctgcagaacgattacacggagggttgc
tatgatctcctcccagaagctgacatggacaggagagatgaggaaggagtgcagatgaca
gcccaacaggtgtttgaggagtttatttgtcagcgactcatgcaaggctatcaaattatt
gtgcaatcgaaaccacagaaaccagccgcaacggtgccacccccgctcagcagcagcccc
ctttacagtcgagggcttgtatcaagaaatcgacctgaggaagaagatcagtactggctg
agtatgggccgtactttccacaaagtaacattaaaagacaaaataattactgtgacccga
tacctgccaaagtatccatatgaatctgctcagataaactacacgtacagcttgtgcccc
tcacactctgactctgaatttgtctcttgctgggtagaattttcccatgagagacttgaa
gagtacaagtggaattacttggatcagtatatctgctctgccggctctgaggatttcagc
cttactgaatcactgaaattttggaggacccgctttctgcttctgcctgcctgcatcagt
gccacgaaacgcattatggagggagaagtgcactgcgatgtgtacggtgacaagccccgt
tctgacgaggaggagtggcagctcttagacggattcattcgcttcgtggaggggttgaac
cgcattcgccgacgccatcgatctgaccgaatgattcgaaaagggtctgccatgaaaggc
ttgcagatcgctggtccaattcccacccactctctggagcagcctggacctcccattggg
aagaagggaacctcggcactctcggctctgctgcagatggaagccagtcagaagacgctt
ggggagcagcaagcagcaatgctcgctgggaagagctctgggccttcggagagtgggagc
attgctatcacacccacctatatggacagccctcggaaggatggggccttctttatggat
tttgttcgcagcccacgtacaacttcaaccttctactcacaggtctctgtagaccagtca
gttcctgcaacgtcagagggcaacacattgataaaccaggggcagttacctgatcggggc
aacacgcagaccttgggaagttcccagagtgtcacagaccaaggatatcccacagctggt
gctgcagaggccggctctcagcagtgttcagcaagcactctgacgtcctcctccaccttg
atagagattcttgaagccatgaaacaccccaccacagggattcagctgctctctgaacag
aagggcctctctccatactgcttcatcagtgcagaggttgtgcactggctggtgaataac
gtggaaggcgtgcaaacccaagccatggcgatcgacatcatgcagaaaatgctagaagag
cagcttattgtccatgcatctggagaagctttacgaacctttatttatggcttttatttt
tacaagattgttgtggacaaagaaccagacagagtgggcatgcagcagcccgcgatgtgg
cacacggctgctgtggatgatttctccgccttccagaggaaatggtttgaggtggcgttt
gtggcagaagagctcctgcactcggaaatcccggcgttcttcctgccctggctgcccagc
cgcccagcctcctatgcaagtaggcacagttcctttagccgcagtttcggaggacggagc
caggcagctgcactattagctgccacagtgcctgagcaacggacggtgacgcttgatgtg
gatgtgaacaaccgcactgaccgcttggagtggtgcagttgttattaccatggcaatttc
tccctgaatgctgcctttgaaatcaagttacactggatggcagtgactgcagctgttctt
ttcgagatggttcaaggttggcatcggaaagccacatcctgtggtttcttgctggttcca
gtcttggaaggcccgtttgctttgcccagttacttatacggagacccacttcgagctcag
ttgttcatccctctcaacgttagctgcttgctgaaggagggtagtgagcatttgttcgat
ggcttcgaaccagaaacttactgggaccgtatgcatctcctccaggaagcaatagcgtac
agatttggatttgtgcaagataaatactcggcctctgcgttcaacttcccagctgagaac
aagccccagtatatccatgtcacagggacagtgtttttgcagctaccgtattccaagagg
aaattttcttgcgggcagcagcgacgccggcgcaattccactagctccaccaaccagaac
atgttttgtgaagagcgcattggctacaactgggcctacaacaccatgctgacgaaaacg
tggcgatccagtgccactggggatgagaagtttgctgatcggttgctgaaagacttcact
gacttttgctggaacaaagatagccggcttgttttgttctggaccgactgtctagataag
atgcatgctagtgccccgtga
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integrated database retrieval system
