Caloenas nicobarica (Nicobar pigeon): 135995496
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Entry
135995496 CDS
T11056
Symbol
ITGAE
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-E
KO
K06524
integrin alpha E
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04518
Integrin signaling
cnic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
135995496 (ITGAE)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135995496 (ITGAE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135995496 (ITGAE)
04090 CD molecules [BR:
cnic04090
]
135995496 (ITGAE)
Cell adhesion molecules [BR:
cnic04515
]
Integrins
Integrin alpha subunits
135995496 (ITGAE)
CD molecules [BR:
cnic04090
]
Proteins
135995496 (ITGAE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
VWA_2
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_1
Integrin_alpha
HisK_sensor
CEP152_CC2
DUF5104
Carbam_trans_N
CsxB
Motif
Other DBs
NCBI-GeneID:
135995496
NCBI-ProteinID:
XP_065502902
LinkDB
All DBs
Position
17:complement(3673364..3702271)
Genome browser
AA seq
1391 aa
AA seq
DB search
MSLAYALKPQLGNAQXGCSVSASAMRPAELEEHQRKRAASACWLLFSCIRLQTENDEIAP
VSALPNEILATSSADKGLGRLRKCSVLQEEIECQEIPLRGKIKGSKNIQDGGIAIDRNSN
WILACLQKKHRRAFATTEDVNGVCTLLTTDLRSSAFLNLTKTVETKLNSVQSKSSRDKIP
DTSSACGEIFGRRGNSHMCKERRTEIAVILGGSESTKAHDFQNAKTSVLNMMKSMWQKCS
KIRFAVVQYGAQIQTELSLQESCNRLTAFFKVRNIKQQSSQTDIAATLQHVLEKVFNESP
DSSQTDKIIIVMASGQVFLENHRLRTVMNSLEVAMVKLYAPGIGEFISNQWVPEELQKVG
SDWFLLSTYEDFGSFLSELERETLSDTAENIPTEAPERRNTNDSGDNKLPSWVEEDEEEE
EENGLRSGREIAFVLDGSGSIEPEDFERAKAFIHKMMKTLYEKCFECSFAVVQYGFEIRT
EFDLRENWDPRATLQKVLDIVQVCNVTKTASAMQHVLDSIFTESHGSRQDAAKVMIVLTD
GEILLDEMNLTTVINSPKMAGIERYAIGVGDAFKKPKALNELRLIASGPDDTNVFQVTNY
SALDGLISTLQQSIIGIEGTQGDALEYELAQAGFSVQILDQQVLMFGAVGAFDWSGGILL
YDLATKTAAFLNESKEEAKTAKYSYLGYSVAVVHTEYGPLYVAGAPRHSMRGKVLVFQDG
RLKQTLQGEQVGSYFGSELCPLDVNRDGVTDLLLVGAPFYHIQGEEGRVYVYRLETETGS
FTLRGHLNVQVTSPFARFGFTVASIGDINGDGYEDIAVGAPLEDRLSNSSSFGSIYIFNG
DKDNIKSSFSQRVKASEISSGLQYFGQSIDGGFDFTNDGVRDITVGSLENVIMLRSRPVV
HFLTSMRFNPERILVLQNNSIVTAKLCFDTISALPVSKQVFSQLYILYTVDLDVKMANRR
VRFEDENTTTSGKLLVSENACAELQLHTLPCDFDCFSSVFLSVKHELYKKNDNTEFAVPV
LDRYQPSEMHFQLPYKKDCRNETLCTAHLTLTSQIQTELVFGHTKEVTMNVSLTNSGDDS
YMTTMVLNYPKPLRFKKVTVEPSSPAVHCGQPAPLTSVILSSNCRIGHPVFKKTTATFSV
IWQLDESIFPNKPVITVNITNTNENSTILTAEHVLDVRYALTASLTTPDSLMYVNVSEGL
LENKEFRFNINGENGFNATIELQIWVPTSIQGRKIVTVKNASGTQAATQCRVSGEAEPDL
QERSGRTGAEEVRDVRYEGVRCSIPAGTDIVTVTAELSLNNVHQFLKSRTVLLVPGKITF
NRELYLALTEENHHAEITLVFLQDEAFNLWPVIIGSCAGGLILLVFLTLLLWKCGFFKRN
YKAMMEQENTS
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgtcactagcgtacgccttgaaacctcagttaggaaatgcacaatagggctgctcagtc
tcagcgagtgcaatgagacctgcagagctggaggagcatcagaggaagagagcagcttct
gcctgctggctcctgttctcctgcattcgcttgcaaacggagaacgatgagatcgctcct
gtatctgctcttcctaatgagattttggctacttcctcagcagacaaggggctgggcagg
ctgaggaagtgcagcgttttgcaggaggagatcgagtgccaggagatacctctgcgagga
aagattaaaggctccaaaaacatccaggatggtggcatagctatcgacaggaactcaaat
tggattctggcttgcctgcagaagaagcaccgccgagccttcgccacaactgaggacgtg
aacggagtctgtaccctgctcaccaccgacctgcgcagctcagctttcctcaacctcacc
aagacagttgagaccaaattaaacagcgttcaaagtaaaagcagcagagacaagattcca
gacaccagcagtgcttgtggtgagatctttggccgcagagggaacagccacatgtgcaaa
gaacggcgaacagagattgctgtcattctgggtggatcagagagcaccaaggcacatgat
ttccaaaatgccaagacatctgtcctcaatatgatgaagtcaatgtggcagaaatgctcc
aagatcaggtttgctgtggtgcagtatggagcccaaatccaaactgaactgagcctgcaa
gaaagctgcaacagactaactgctttcttcaaagtccgaaatatcaagcagcagagctcg
cagactgacattgcagccacactgcagcatgtgttggaaaaagtctttaatgaaagccct
gactccagccagaccgacaagataattattgtcatggcatctgggcaagtgtttctggaa
aaccatagactgagaactgtgatgaactccctggaagtggcgatggtcaagctctatgct
ccagggattggagagttcattagcaaccagtgggtgccagaagagctgcagaaagttgga
agcgactggttcctcctgtccacatatgaagattttggcagtttcctttcggagttagag
agagagactctgagtgatacagctgaaaatattccaactgaagcaccagagcgcagaaac
actaatgacagcggtgacaacaagctcccttcctgggtggaggaggatgaggaggaggag
gaggaaaatggcttgcgttctgggagagagattgcttttgttttggatggatcagggagc
atcgagccagaggattttgaaagagcaaaagcattcatccacaagatgatgaaaacgctg
tatgagaagtgctttgagtgcagttttgcggtggttcagtatgggtttgaaatcagaact
gagttcgacctgcgagaaaactgggatccacgtgccaccctccagaaagtacttgatatt
gtgcaggtgtgcaacgtgacaaaaacagcatctgccatgcagcatgtcctggattccatc
ttcactgaaagtcacgggtcccgccaggatgcagccaaggtcatgattgtgcttacagat
ggggaaatcctcctggatgaaatgaacttgacaacagtgataaattcacccaaaatggca
ggaatcgagcgctatgccatcggggtgggagatgccttcaaaaaacccaaggccctaaat
gaattacggctaattgcgtctggtccagatgacacaaatgtatttcaggtgaccaattat
tcagcattagacgggctgatttcaaccctgcagcagagcattattggtatagaaggtaca
cagggtgatgctctggaatatgagcttgcacaggctggtttcagtgtgcagatcttggat
cagcaagtcttaatgtttggtgcagtgggggcctttgactggtctggtggaattctactg
tatgatctggcaaccaagacagctgctttcctgaatgaatctaaagaagaagccaaaaca
gcaaaatacagttacctagggtacagtgtggcagtggtacacacagaatatggacccttg
tacgtggctggagctccacggcacagcatgagggggaaggtgttggtgtttcaggatgga
cgcttaaaacaaaccctacaaggagaacaggttgggtcttattttggatctgagctctgc
cctcttgatgtgaaccgtgatggggtgacagatcttctccttgttggagctccattttat
cacattcaaggggaagaaggaagggtttacgtctatcgcctggagacagagactggttca
ttcaccttgagaggacacttaaatgtgcaggtgacctctccttttgcacggtttgggttt
acagtggccagcatcggagacatcaatggggatggatatgaggatattgcagttggagcc
ccccttgaagatcggctttcaaacagctcctcttttggcagcatttacatctttaatggt
gataaagacaacatcaagagctccttttctcaaagagtaaaagcctctgaaatttcttca
ggacttcagtattttggacaatccattgatggtggctttgatttcactaatgatggtgtc
cgagatattacagtaggatcactggagaatgtgattatgctccgctcgagaccagttgtc
cactttctcaccagcatgagattcaaccctgagagaatcctagttctccaaaataacagc
attgttacagcaaaactatgtttcgatacaatctcagctttaccggtgtctaaacaagtg
ttttcacagttgtacattctctacacggtggatttggatgtgaaaatggcgaacaggaga
gtgcggtttgaagatgagaacacgacaacgagcggaaagctgctggtcagcgagaacgcg
tgcgctgagctgcagcttcacacgctgccatgtgactttgactgcttttccagtgttttt
ctgagcgttaaacacgagctctataagaaaaatgataacacggagtttgctgttcctgtg
ctggatagataccagccatcagaaatgcattttcagttgccgtacaagaaggactgcagg
aacgagacgctctgtactgctcatttaaccttgacaagtcagattcaaacggaattggtg
ttcggccacacgaaagaggtgaccatgaacgtttcactaacaaacagtggagacgactcg
tacatgacaactatggtcctgaactatcctaaacccctccgttttaagaaggtgactgtt
gagccgtcctctcctgctgttcactgtggtcaaccagcaccgttaacttctgtgatctta
tcctctaactgcagaattgggcatccagttttcaaaaagacaactgcaacattttcagtg
atttggcaattagacgaaagcatattcccaaataagcctgtaatcaccgttaatatcacc
aatacaaatgaaaacagcaccatcctgactgcagaacacgtccttgatgtcagatatgca
ctcactgcaagcctcaccacaccagattctttaatgtacgtgaatgttagtgaaggactt
cttgaaaacaaagaattcagatttaatataaatggagaaaatggctttaatgctaccatc
gagttacagatttgggttcctaccagtatacaaggtcgcaaaatcgtaacagtcaaaaat
gcatcaggaacacaggcggcgacgcagtgcagggtgagcggcgaagcggagccggatctc
caggagcgttccggccgcaccggagcagaggaggttcgggacgtgcggtatgagggcgtg
cgctgctccatcccggctggcacagacatcgtcaccgtgacagcagaactgtctttaaac
aacgtgcaccagttcttaaaaagcagaactgttctgctggtccctggaaaaatcaccttc
aacagagaactatatctggccctgacagaagagaatcatcacgctgagatcactctcgtc
ttcctgcaagacgaagcgtttaatctctggcctgttatcatagggagctgtgctggtgga
cttatcttgctggtgttccttactctgcttctctggaaatgtggctttttcaaaagaaac
tataaagctatgatggagcaagaaaatacttcctga
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