Caloenas nicobarica (Nicobar pigeon): 135995546
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Entry
135995546 CDS
T11056
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135995546 (MED13)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
135995546 (MED13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
135995546
NCBI-ProteinID:
XP_065503001
LinkDB
All DBs
Position
17:complement(2692864..2744948)
Genome browser
AA seq
2179 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSTVGASH
CSTTCLGVHQVPPSTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGLISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCDEETADKVASWDFVEATQ
RTNCNCSRHKNLKPRNSGQQGQAPPVGQQQQVAPKHKTNEKQDKGDKPQKRPLTPFHHRV
SISDDVAMEADSASQRLVMTAPDSQVRFSNIRTNDVAKTPQMHNAEMANSPQPPPLSPHP
CDVVDEGVAKAPSTPQSQHFYQMPTPDPLVPTKTMEDRLDGLSQPYPAPFPEVIEPTMYV
GTAVNLEEDEADTTWKYYKVPKKKDVEFLPPQLPNDKLRDDPVIPAGQENVTSVTELMVQ
CRKPLKVSDELVQQYQSKNQYLAAVATDADQEPEIDPYAFVDGDVEFLFPDSKKDRQNME
REVGKKHKAEDGTSSVTVLSHEGEDAMSLFSPSVKQDAQRIAAHARTASTSLFHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGADDKSNCKEAKAGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSSVGAQFRIEVDEGFCSPKPAEIKD
YSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLDLLPPGPAMP
FIKDGDGSAMDQEYGPAYTPQTHTPFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTP
RTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSS
GLFLEDELDILGRNTECGKEAEKRFEALRATSVEHGSGGLKEPEKLPDELILLLQDQCTN
LFSPFGAADQDSIPKVGAVSNLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKT
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFS
QTANANNEAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQTNLVPPASQPASALPAVTAG
TGNPNTPSAAPAAPTSSTVTTTSNSAVSSAATTANSTLTTTAPASSSASIGSGIPTNKPS
SFPPFPSMNNTAPASLPAQAATVQNGQAGGQQQQPALQTAGMAGDAASAPAQPHPEVSES
TMDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDENSSSSSLWTLGLLRCFLEMVQ
VLPPNIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTL
TGFGPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYC
LSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSS
LPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLV
AMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASST
YTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGG
DMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLF
LKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSC
LPIHFVVLNQLYNFIMNML
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctaactgggattaaatggaagcgatacgtatggcagggtccaacatct
gccccgattctctttccggtcacggaagaggaccctattttgagcagtttcagtcgctgt
ctgaaggcggatgtgctcagcgtttggcgccgagaccagagacctggacgcagggagctg
tggatattttggtggggtgatgaccccaactttgctgaccttattcatcatgatctctca
gaagaggaagatggtgtttgggagaatggactttcctacgaatgtcgcactctacttttc
aaagctgttcacaacctgctggagaggtgtttaatgaatcggaattttgtacgcattgga
aaatggtttgtgaagccttatgaaaaagatgaaaaacctataaacaagagtgagcacttg
tcctgctcattcaccttcttcttgcacggagacagcaacgtctgcaccagcgtggagatc
agccagcaccagcctgtgtacctgctcagcgaggaacacctcactcttgcccagcagtcc
aacagcccctttcaagttattctgagtccctttggtttaaatggcacgctcacagggcag
tcattcaagctttctgattcatcgacaaaaaagcttattggtgaatggaaacaattctat
cctgtcacatctaacttgaaggagggatctgaggaaaaacaggaagaaatggattgggag
gatgattctttagctgctgttgaagtccttgttgctggtgtgcgaatggtgtacccggcg
tgcttcgttctggtcccgcagacagacatccctgctcccagtactgtcggggcatctcac
tgttcaactacttgcttgggtgtccaccaagtgcctccttccaccagagaccctgccatg
tcctcagtgaccctgacgccacccacatccccagaggaagttcaaacagttgatgctcaa
tctgcccagaaatgggtgaagttttcttcagtttctgatggattaatctctgacagtact
agccatcatggtggcaaaatccctagaaagctcgccaaccaagtggtggacagggtttgg
caagaatgcaatatgaacagagcacagaacaagaggaagtattctgctacatcgaatggt
ttgtgtgatgaagagacagctgacaaagtagcatcctgggattttgttgaagccacgcag
aggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcgggtcaacag
gggcaggcaccacctgtgggccaacaacagcaagtggctccgaagcacaagacaaatgag
aagcaagacaaaggggataagccacagaaacgccctttgactccttttcatcatcgtgta
tctatcagcgatgatgttgccatggaggcagattcagcgagtcagaggctcgtgatgact
gcaccagacagtcaagtgagattttcaaatatccgaactaatgatgtagcaaagactcct
cagatgcataatgctgaaatggcaaattcacctcagccgccgccactcagtcctcacccg
tgtgacgttgtcgatgaaggggtcgctaaagccccttctactcctcagagtcaacatttc
taccagatgccaacaccagatcccttggttcccacaaaaacaatggaagacagactcgat
ggcttgtctcagccttatccagctccgtttcctgaagttatagagcctacgatgtatgtt
ggtactgcagtgaacttggaggaagatgaagctgataccacttggaagtattataaagtt
ccaaagaaaaaggatgtggaattcttaccgcctcagcttccaaatgataagttgagagat
gatccagtaatacctgctggacaggaaaacgtaacatcagttacagaattaatggtgcaa
tgtaggaaacctttaaaggtttcagatgaactggtgcaacagtatcagagtaaaaaccaa
tacctagcagcagtagcgacagatgctgaccaggaacccgaaatcgatccttatgccttt
gttgatggcgatgtggaattcctgtttcctgatagtaaaaaggacaggcagaacatggag
agggaggtcgggaagaaacacaaggctgaggatgggacatctagtgtgacagttttatcc
catgaaggagaagatgctatgtctctatttagtccttctgtcaagcaagatgcccaacgt
attgctgctcatgctcgcaccgcatcaacgagcctgttccacgaaacagacttagtggtg
tcttacactgacctggacaatctcttcaactcggatgaagatgaattaacacccggctcc
aaaagaacagtgaatggcgctgatgacaaatccaactgcaaagaggcaaaagcaggaaat
ctagacccactgtcatgcataagcactgcagatctacataaaatgtatccaactccacct
tcattggaacaacatattatgggattttctcccatgaacatgaataataaggagtatggc
agtatggacactacacttggaggaacggtactcgaagggaatagctccagtgtgggagct
cagttccgaattgaagtggatgagggtttctgcagccccaaacctgctgaaataaaggat
tattcttatgtttataagcctgagaattgtcaagctttagtgggatgttccatgtttgca
ccactgaagacacttcccagccagtgtcttcctcccatcaagcttccagaagaatgcatt
tatcgccagagctggactgtgggcaagttggatttgcttcctccaggaccggccatgccg
ttcatcaaagatggtgatggaagcgctatggatcaggagtacggccctgcctacacacca
cagactcatactccgtttgggatgccaccaagtagcgcacctcccagtaacagcggagct
ggaattctcccttctccttccacccctcgtttcccaactcctagaacaccaaggactcct
cgaacacctcgtggggctggtggacctgcaagcgcacagggttcagtcaaatatgagaac
tctgatttatactcaccagcttccacgccgtcgacgtgtagaccgcttaattctgttgag
cctgcaaccgtgccttccatcccggaggcgcacagtctttacgtgaatctcatcctctcg
gagtctgtcatgaatctcttcaaagactgtaacttcgacagctgctgcatatgtgtttgc
aatatgaacatcaaaggtgctgatgttggagtttacattcccgatccaacacaagaggcc
cagtataggtgtacctgtggtttcagtgctgttatgaatagaaaatttggcaacagttct
ggactgtttcttgaagacgaattggatattctaggacgtaacacggagtgcggcaaagaa
gcagaaaagcgctttgaagctctcagagctacttctgtagaacatggcagcggaggactg
aaggaacctgagaaactgcccgatgagttaatactgttgctgcaggatcaatgcaccaac
ttgttctcaccgtttggagcagctgatcaagattccattcccaaagtcggtgcagttagc
aacctggtacgtgtagaagaacgggattgttgcaatgactgctacttagccttggaacat
ggacggcagttcatggacaatatgtcaggagggaaagtcgatgaagcacttgtgaaaact
acttgcttgcaccactggtcgaaaagaaatgttgtggacgtgagcatgcagtgttcccag
gacatccttcggatgctcctctcgctccagccggttctgcaggatgcgattcagaagaag
cgaacggtgcggtcgtggggtgtgcaggggcccctcacgtggcagcagttccacaaaatg
gctggcagaggctcctacggaaccgatgagtccccggaaccgctgccaatcccaacattt
ttgttgggatatgattacgattttctggtgctgtccccatttgctttgccgtattgggag
aggctgatgttggaaccttacggatctcaaagagatgttgcgtatgttgtggtgtgccct
gagaatgaggctctgctgaacggagcaaaaagcttctttagggatctgactgcaatatat
gagtcgtgcaggcttgggcagcacagacccatctgtaagttattgcccgatgggatcatg
agagttggtcctactgcttcaaagaaactttcggagaagctggtcacagaatggttctcc
cagacagctaatgccaacaatgaggcattttccaaactcaaactatatgcccaagtttgc
agatacgagctgggtccttatcttgcttctcagcctttggacaattctttactgtcccaa
accaatctggtcccgccagccagccagccagcctctgctctgcccgcggtgacggctggc
actgggaatcccaacactccgtcggctgctcctgccgctcccaccagcagcaccgtgaca
acaacatccaacagcgccgtgtcttctgccgctaccaccgctaactccacgctgaccacc
actgccccggcgtcctcttctgccagtataggcagtgggataccaacaaacaagccttct
tcgtttccgccttttcccagtatgaacaatacggctccagcctccctgcccgcacaggct
gcgacagtgcagaatgggcaggcgggggggcagcagcaacagccagcgctgcaaacagcc
gggatggctggagatgctgcttcagcacctgcacagccccatccagaggtttctgaaagc
actatggatcgtgataaagttggagtccctacagatggagattcacatgctatcacctat
ccacctgcaattgtagtttacataattgatccttttacgtatgaaaaaaaggatgagaac
agtagctcatctagtttgtggacgcttggacttctgcgctgctttttagagatggttcag
gttcttcctcctaacatcaagaatataatttctgtgcagattgtgccatgccagtacctt
ctacaacctgtgaaacatgaagaccggcagatttacactcagcatttaaaatctttggca
ttttcagcttttactcagtgtcggaggcctcttccaacttccaccaacgtgaaaacttta
actggctttggcccaggtttagccatggaaacggctctgaagagccctgatagacctgag
tgtattcgactctacacccctccttttatactggctcctgtaaaggacaagcaaacagaa
ctaggagagacttttggagaagctggccagaagtataacgtactttttgttggctactgt
ttgtctcacgatcaaaggtggctccttgcatcctgtacagatctctatggagaacagtta
gaaacttgcataattaatattgatgtaccaaacagagctcgcaggaaaaagggctctgcc
cgcagacttgggcttcagaaactctgggaatggtgcttgggacttgtgcagatgagctct
ttgccatggagagttgtaataggccgcttaggaagaataggacacggggaactaaaagac
tggagttgtttgctgagtcgccgaaaccttcagtcccttagtaagagactcaaggacatg
tgcaggatgtgcgggatctcggctgcagactctcccagcattctcagtgcatgtttggtg
gcaatggaaccacaaggatccttcattattatgccagattctgtatcgactggctctgta
tttggacgcagcaccactttaaacatgcagacatctcagctgaacaccccccaggacacg
tcgtgcactcatatactggtgtttcccacatctgcatctgtgcaagtagcatcgtcaacc
tataccactgaaaacttggatctggcctttaacacaaacaatgatggagcagatggaatg
ggaatctttgacttgttagacactggagatgatcttgatcctgatatcataaatatcctt
cctgcatcccccactggatcccctgtacattctccagggtcccactacccccacggaggt
gatatgggcaagggtcaaggtacagatcgattgctgtcaacagaatcccatgatgaagta
acaaacattctgcagcagccattggcccttggctattttgtgtcaactgccaaagcaggt
ccattgcctgactggttttggtcagcatgtcctcaagcacaaaatcaatgtcccttgttt
cttaaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccacagt
aaacactcccatccgcttgattctaatcaaacttctgatgtgctcaggtttgttctggaa
cagtacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtcgtgt
ctcccgattcattttgtggtgctgaatcagttatataactttatcatgaatatgctgtga
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integrated database retrieval system
