Caloenas nicobarica (Nicobar pigeon): 135995623
Help
Entry
135995623 CDS
T11056
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135995623 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135995623 (NUP58)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135995623 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
NET2A_C
Nup49_C
Tox-ODYAM1
Mitofilin
PSY3
GAIN_ADGRA3
ASNSD1-SEP
Motif
Other DBs
NCBI-GeneID:
135995623
NCBI-ProteinID:
XP_065503152
LinkDB
All DBs
Position
1:complement(194344853..194384707)
Genome browser
AA seq
602 aa
AA seq
DB search
MSAGFSFGTGTLGSAAAAAAGAGGGGGGGGFSFGAATLSSTGGLNFGTLGSSTATATTSA
PSVGFGSGLFGSKSTPVFTLGGTSTAGTATTIATGLTLGTPATTSAATTGFSLGFNKPAG
SATPFALPVTSTSASGLSLSSALTSTPAAGTTGFTLNLGGTTAATTTASTGLSLGGALAG
LGGSLFQNTSTAATGLGQNALSLTLGTTATPSTTANEGLGGIDFSSSSDKKSDKTGTRPE
DSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVV
ASGLQRNTLNIDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQL
QQYRQQIEELENHLTTQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKMLKDQY
LGYRKTFLGDAMDVFEARRAEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPA
TGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSSLGGFGSSSAFGSSATGASSFGFGTTSKP
SGSLSAGFGSSTTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRG
KR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgggcttttccttcggcacggggacactgggctccgcggcggccgccgccgcc
ggagcaggaggaggaggcgggggcgggggattttccttcggagccgccacgctgagctca
acaggaggacttaattttggaactctgggctcttccactgctacagcaactacatcagct
ccttcagtgggctttgggagtggactttttggatcaaaatcaacacctgtctttacacta
ggaggcaccagtacagcaggaacagcaactactattgctacaggactgacactaggcaca
cctgccaccacatcagcagctaccacaggctttagtttgggtttcaacaaacctgcaggt
tcagccacaccatttgctttacctgttacttctacctcagccagtggcctgtcattatca
tctgctcttacatcgactcctgcagcaggaactactggctttacattaaatctgggtggt
acaactgctgcaactacaactgcctccacaggcctttccttaggaggagccttagcaggt
ttaggaggttcactattccagaatacaagcacagcagcaacaggacttgggcagaatgct
ttgagtttgactctggggacaactgcaactccttcaactactgccaatgaaggtcttggt
ggcattgatttcagtagttcttcagacaaaaagagtgacaaaacaggaacaagaccagaa
gatagcaaagcactaaaggatgaaaatctacctccagtaatatgtcaagatgtagaaaat
ctacagaaatttgtcaaagaacaaaagcaagttcaggaagaaattagtagaatgtcctct
aaagcaatgcttaaagtacaagaagacattaaagctttgaaacaacttctgtctgtagtt
gccagtggattacagagaaacactcttaatattgacaagctgaaagtggaaactgcacag
gagctaaagaatgcagaaatagcattacgaacacagaaaactcctcctggtctccagcat
gaaaatacagccccagcagactacttcagaatcttggttgagcagtttgaagtacagctg
caacaatacaggcaacaaatagaagaactggaaaatcatcttactactcaagcaaataat
tcacacataactccacaagatttgtcaatggctatgcagaaaatctatcaaacatttgta
gctttagctgcacaacttcaatcaatacatgaaaatgtaaagatgctcaaagaccaatac
cttggctacaggaaaacctttctgggggatgccatggatgtgtttgaggcgagacgagca
gaagcaaagaagtggcagagtgcgccacgtgttaccactggaccgactcctttcagcaac
ataccaaatgcagcagccgttgcaatggctgcaacacttactcagcagcaacagcctgct
acagggccacagccatctctgggagttagttttggaacgccattcggctcaggtattggc
actggcttgcaatcgagtggcttaggttcttcaagccttggaggatttggaagtagctct
gcctttggaagcagtgccacaggagcatcatcttttgggtttggaaccacgagtaaacca
tcaggaagtctaagtgcaggctttggcagctcgactacatctgggtttaacttcagcaat
cctggcatcacagcatcagctggcctgacgttcggggtgtctaatcctgcatctgcaggc
tttgggacaggagggcaacttcttcagctgaagaaacctccagctggaaacaagcggggg
aaaagatag
DBGET
integrated database retrieval system
