Caloenas nicobarica (Nicobar pigeon): 135995686
Help
Entry
135995686 CDS
T11056
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135995686 (HNF1B)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
135995686 (HNF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
135995686
NCBI-ProteinID:
XP_065503254
LinkDB
All DBs
Position
17:1389968..1410921
Genome browser
AA seq
556 aa
AA seq
DB search
MVSQLSALQRELLGALLSSGATKEGLIRALEDMVPAAGFGVKLESLPLSPGGPPDGKATF
PPLANGHGKGKLSGDEGSEDGDDFDTPQILRELQALNTEEAVEQRAEVDRMISEDPWRAA
KMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQ
FNQTVQGCGNRTDKSTQDQLLFLFPEFNQQNQGAAQLDDACSETPSKKMRRNRFKWGPAS
QQILYQAYDRQKNPSKEEREVLVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFAN
RRKEEAFRQKLAMDAYSSGQPPHSMNLLLSHGSPHHNQPSASPPSKMPGVRYSQASGEAA
SSGAISHHGGGAMVTTSQAVLQQVSPAGLDPGHGLLSPDGKMISVSGGGLPPVSTLTNIH
SLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQFPQQLHS
PHQQPLMQQSPSHMTQQPFMATVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSSIS
TLTNMSSSKQCPLQAW
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccagctgagcgccctgcaacgggagctcctgggtgccctactcagctccgga
gccaccaaggaagggctgatccgtgccctggaggacatggtgcccgctgccggcttcggc
gtcaagctggagagcctgccgctgtcccccggcgggccgcccgacggcaaggccaccttc
ccgccgctggccaacgggcacggcaagggcaagctctccggtgacgagggctcggaggac
ggcgacgacttcgacacaccgcaaatcctccgcgaattgcaggcgctcaacacggaggag
gccgtggagcagcgggccgaggtggacaggatgatcagcgaggacccgtggcgggcggcg
aagatgatcaagggctacatgcagcagcacaacatcccgcagcgggaggtggtggatgtc
accggcctcaaccagtcccacctctcccagcacctcaacaagggcacccccatgaagacg
cagaaaagagccgctctctacacgtggtacgtccgcaagcagcgggagatcctccgccaa
ttcaaccagacagtccaggggtgtggaaataggacagacaaaagcactcaggatcagctg
ctgtttctctttccagagttcaatcagcagaaccaaggggctgcccagctcgacgacgcc
tgctctgaaacccccagcaagaagatgcggcgcaatcggttcaagtgggggccggcctcc
cagcaaatcttgtaccaagcctacgaccgccaaaagaaccccagcaaggaggagcgtgag
gttctggtggaggaatgcaacagggctgagtgtctgcagcgaggggtgtcaccctccaag
gcgcacgggctcggctccaacctggtgacagaggtccgcgtctacaactggtttgccaac
cggcggaaggaggaggctttccgccagaagctggccatggacgcctacagctcgggccag
cccccgcacagcatgaacctgctgctgtcccacggctccccccaccacaaccagcccagc
gcctcgcctcccagcaaaatgccaggggtccggtacagccaggcgagcggcgaggcggca
tcctccggggccatcagccaccacggcggcggtgccatggtcaccaccagccaggcggtc
ctgcagcaggtctccccggccggcttggacccgggccacggtttgctctctcccgacggc
aaaatgatctccgtttcagggggtgggctgcccccggtgagcaccctgaccaacatccac
agcttgtcccaccacaacccgcagcagtcccagaacctcatcatgacgccactctcggga
gtcatggccatcgcacagagtctgaacacctcgcaggcgcagagcgtgcccgtgatcaac
agcgttgccggcagcctggcggccctgcagccggtgcagttcccccagcagctgcacagc
ccgcaccagcagccgctcatgcagcagtcgcccagccatatgacgcagcagccgttcatg
gccaccgtgacccagctgcagaactcgcacatgtacgcgcacaaacaggagcctccccag
tattcccacacctcccgcttcccctcggcgatggtggtgacagacaccagcagcatcagc
acgctgaccaatatgtcttccagtaagcagtgtcccctgcaagcctggtga
DBGET
integrated database retrieval system
