Caloenas nicobarica (Nicobar pigeon): 135995740
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Entry
135995740 CDS
T11056
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135995740 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135995740 (RNF43)
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135995740 (RNF43)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135995740 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
DUF5305
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
135995740
NCBI-ProteinID:
XP_065503337
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All DBs
Position
17:10588179..10649265
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AA seq
821 aa
AA seq
DB search
MSAGPQLQLALLWPWLLMATLQAGLGQTELALAAAVESERSAAQKAIIRVIPLKVEPIIL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSLQQQTVQAIRQLATR
TYQARCRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSVDQATAAGSRLVPRDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRS
FPSEPTHSNPFFHSPELSQLDFSTIHYVPYRAATSLPACAHPSPLAPGLLGQQHPNPSAC
GQTLSPHRTCSLQPPCLGLKAALAQKQHRANPLRRGVGHGHQHNSSGSGESYLTEHSGYL
ADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGPPT
DTGQEQPWPLRDTRPRSLDLLVPGGAAPAKPQVLSHVHYHHHQHHHYGRDAECPPGRTGQ
RKSRHSGAKVGFHGVRTQKRTEKSHHCQQALESSAVPQEAAPACPQQGREPPHVPTASPN
RLDFSVDATRQSGAAGKSPLPLRHSLQSRHHRRKRKCPLEPDPALLPEDLALAKACDAHV
PPSHPTGYRCSPEVQPLIPSAPLLCGSGSRPLWKCLVPQSGSELRKQEEGLSGREGNRTV
PADFSGTGTPRHSLSVRLHGPSQRGSQGSEEEVQDVREHSV
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccagctgcagctggctctcctctggccttggctgctcatggcgacg
ctgcaggcaggactgggccaaacggagctggcgctggcggcggcggtcgagtcggagcgg
tcggcggcgcagaaagccatcattcgcgtgatccccctcaaagtggagcccatcatactg
gagggggagtttgcaaacgtcgccgaggtgactccggccgaaggaaaactgctgcagtcc
cacccgctgtccctgtgcaacaccagcgaggatgaacacactgaatcgggattcatcacc
atcgtcaagcttgaacagccggatcgggatcccaacccctgcctgtcgctggctaacaag
gcaaagctggcgggggagcgtggagcccgtgcgatcctctttgacattaccgatgatgaa
agcgctgccgatcagctgagaaagcccagaggtctgagtcagcccgtggttctgatcagg
ggccacgatgctgagcttctcatgggtgtcgtgaacaagaacagagaggcacacgtgaag
atagaggtcaaggagccaccagcttggccagactatgacgtgtggattcttctcacagtg
gtcagcactgtcgtcgtgatcattttgatttttgttgtccgcacaaagtgccagctgaac
aggactcaggactccctgcagcagcagacggtgcaggcgatccggcagctggccacgcgc
acgtaccaggcccggtgccggcaagcgtcgcgctgggactcagccagcagctgcagctca
gccccggtctgtgccatttgcctggaggagttcagcgagggccaggaactgcggatcatc
tcgtgctcccacgagtttcaccgggagtgcgttgacccttggctgcagcaacaccacacg
tgtcctctttgcatgttcaatattcttgccagagactcggtggaccaggccacggccgct
ggctccaggctggtccctcgggacatggagcccggacggcgactccaccttttccgccag
cacccgggacatgccctttaccacctcccacacgcgtatcctcagaggaatctccggagc
ttcccctcagagccaacccacagcaaccccttcttccactctccggagctctcccagctg
gattttagcaccatccactacgtgccctacagagcagccacctccctgcccgcctgcgcc
cacccgtcccccctggccccgggtttgctgggccagcagcaccccaacccctcggcgtgt
gggcagacactgtcaccccacaggacttgttccctccagcccccctgcctggggctgaag
gcagccctggcacagaagcagcaccgcgcaaaccccctgcgccggggggtcggccacggg
caccagcacaacagcagcggctctggggagagctacctgaccgagcacagcgggtacctg
gcagacgggccgggcagcgactccagctcggggccctgccatggttcctccagtgactcc
atgttgaactgcacggacgtcagtctgcagggcatccacggcagctgctccacgttccgc
agctccctcagcagcgactacgaccccttcgtgtactgcagctcggagggaccccccacg
gacacgggccaggaacagccgtggccgctgagggacacacggcccagatccttggacctg
ttggtgccggggggtgctgctccggccaagccccaggtgctcagccacgtccactaccac
caccaccagcaccaccactatggcagagatgcggagtgtccccccgggcgcaccgggcag
cgcaaatcccggcactcgggggccaaggttggcttccacggtgttcggacacaaaagaga
actgagaaaagccatcactgtcagcaggccctggaaagcagcgctgtgccacaggaggca
gctccagcctgtccccaacaaggccgggagcctcctcatgtccccaccgcttctccaaac
aggttggacttcagtgtggatgccaccagacaatcgggagcagctggaaagtccccgctg
cccctgagacacagcttacagagccgtcatcaccgaaggaaaagaaaatgtcccctggag
cctgaccctgctctcctgcccgaggacttggccttggccaaagcctgtgatgctcacgtt
cctcccagccatcccactggctaccgctgctcgcccgaagtccagcccttgatcccaagc
gctcccctgctctgcggctcgggctctcggccgctctggaagtgtttagtgccgcagtcc
ggctccgagctgagaaagcaggaggaggggttatcaggacgggagggaaaccgcacggtt
cctgctgatttctcagggacgggcacccccagacacagtctgagcgttcgccttcatggc
ccctctcagcggggcagtcagggatctgaagaggaagtccaggatgtccgtgaacactcg
gtttaa
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