Caloenas nicobarica (Nicobar pigeon): 135995988
Help
Entry
135995988 CDS
T11056
Symbol
CCDC42
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil domain-containing protein 42
KO
K25440
CFAP73 family protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cnic03037
]
135995988 (CCDC42)
Cilium and associated proteins [BR:
cnic03037
]
Motile cilia and associated proteins
Modifier of inner arms (MIA) complex
135995988 (CCDC42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4200
DUF6943
CALCOCO1
DUF3567
Motif
Other DBs
NCBI-GeneID:
135995988
NCBI-ProteinID:
XP_065503711
LinkDB
All DBs
Position
18:12057182..12062033
Genome browser
AA seq
387 aa
AA seq
DB search
MGTTSWWPQAGPRAVPGLTWESSGARRTWAFWALLVAEMIATEDEEDLPAYFLKQYRQNL
LPLLRKHRLTEEGSLSPFIRLQEKRKEAKQVQKALEEKQEAFKEKMADIARRWRELHAKE
DQLKTYMEKSVRMLKEDDKLRVQALKKAIREREKKTQKEMELLRAKKELEALKKEHQKLS
NQVQKYSVFKKYLEDVVKISPQFEDIQDVISRYKLLARMHKDLQQSQEKNKEMCKQTKVL
LDQYRAEKEDEILQYQNELEQLQQCFGQAQSDVRFWTTRWADIQNTNAKNALMLTTMKMA
IHNLFQCVNTQLKAKVNVPEDDSHRHLDMIQQSILDLKDVITEVKRRTWRATGEHLSKSS
KGKRRTGSPMDVVDSTLGYISKVSKPF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccaccagctggtggccacaggcaggaccaagagcagttcctgggctgacctgg
gagagcagcggtgccaggaggacctgggctttctgggccctgctggtggctgaaatgata
gccactgaagatgaggaggacctgccggcctatttcctcaagcagtacaggcagaacctc
ctgcccttgctcaggaaacacaggctgacagaggagggctccctgtctccatttattcgc
ctacaggagaagaggaaagaagccaaacaggtgcaaaaggctctggaggagaagcaagag
gccttcaaggagaagatggccgacatagcccgccggtggagggaactccatgccaaggag
gatcagctgaaaacctacatggagaaatctgtgaggatgttaaaggaagatgataagctg
cgagtccaagctctgaagaaagccatcagagaaagagagaagaaaacacaaaaggagatg
gagcttttgagagctaagaaggaacttgaagccctgaaaaaggaacaccagaagctcagc
aaccaagtgcagaagtattccgttttcaaaaaatacctggaggatgtggtgaagatctca
ccacagtttgaggacatccaggacgtcatttcccgctacaagttgctggcgaggatgcac
aaggacctgcagcagtcacaagagaagaacaaggaaatgtgtaagcaaaccaaggtgctc
ctggaccagtacagggcagagaaagaagatgagatcctgcagtaccaaaatgagctggag
cagctccaacaatgttttgggcaggctcaaagtgatgtccgcttctggacaactcgctgg
gccgacatccagaacacgaatgccaagaatgccctgatgctgacaactatgaagatggcc
atacacaacctcttccagtgcgtgaacacgcagctgaaagcaaaagtgaatgtgccggag
gatgacagccacagacacctggacatgattcagcaatctatcctagacctcaaagacgtc
attacagaggtgaaacggaggacatggagagccaccggcgagcatctaagcaagagctct
aagggcaagaggaggacagggagccctatggatgttgtggactccactctgggttacatc
agcaaagtttcaaaacctttctag
DBGET
integrated database retrieval system
