Caloenas nicobarica (Nicobar pigeon): 135996014
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Entry
135996014 CDS
T11056
Symbol
ELAC2
Name
(RefSeq) LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 2
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnic03016
]
135996014 (ELAC2)
Enzymes [BR:
cnic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
135996014 (ELAC2)
Transfer RNA biogenesis [BR:
cnic03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
135996014 (ELAC2)
Prokaryotic type
135996014 (ELAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
135996014
NCBI-ProteinID:
XP_065503758
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All DBs
Position
18:complement(9964694..9981770)
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AA seq
867 aa
AA seq
DB search
MARGSAEAAARLLAAGSSGGAGARARMWAVARRALSGRALSGRAMAEGSAPRGPARRPKD
VPRHVWARERRRSAGTGLAGPNTVYVQVVAAGSRDAGAAVYVFSEFNRYLFNCGEGTQRA
MQEHKLKISHLDSIFLSRVTWANVGGLPGMILTLKAMGLQRCVFLGPPKLQNYLKAIRLF
PGPLKRMDLAVQLHTEPEYKDETMTVHQIPLTGKPLAAESVLPQSPGASTQGGNSPKGDT
GPGSPRAAQQNLEKGKEKESPKKTGDKQKCASRHPDVVMAFLCKIHPKKGKFLAAKAQEM
GLPVGTPAILPIITALKNGESITFEGRELFPEDLCTPTDPGPAFIVLECPHEGFVDAVCE
NETFRRYQEGHPENQVALVIHMTPESVLRDSRYQQWLERFGPGTRHMVLNENSSTVHNPR
SYKIQTQLNLIHPEIFPLLTTYQSKEEEAVCSVPIVRGECLLKYHFRPQQEWQRDAVTVC
DHNAFVSEALDLPNFQTRVKECKESLSAAPGNVSAYPEIVFLGTGSAIPMKIRNVSSTLV
NTSSTQSLLLDCGEGTFGQLCRHYGEQVDQVLCNIAAVFVSHMHTDHHSGLLNILMERRR
AFAGLGQAFSPLFLVAPEQILPWLHEYHNHCEEILGDIKMIPSQSLVKGCENIRPKAKGF
VSSLLESYDLAEFQTCEVQHCKNAFACSMLHKSGWKVVYSGDTMPCMALVEMGKNATLLI
HEATLEDGMEKEAIEKTHSTTSQAIQTGMKMNAGFIMLNHFSQRYAKIPLFSEDFSEKVG
IAFDHMRIRFGDFPTIPKLISPLKALFADDIVEMEERKEKREMRLLKETAIVLDKLAAAE
NKEAPYQKRKQTKNHQELSNKKLKTVN
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggggctctgctgaagccgctgcgcgcctattggcggctggcagctctggaggg
gcgggggcacgcgcgcggatgtgggccgtggcgcggcgggcgctgtcgggccgggcgctg
tcgggccgggccatggccgagggctccgctccgcggggtccggcccggcggcccaaggac
gtgccgcggcacgtgtgggcccgcgagcggcgccggagcgcaggcacgggcctggcgggg
cccaacaccgtgtacgtgcaggtggtggccgccgggagccgcgacgcgggcgccgccgtc
tacgtgttctccgagttcaaccggtacctgttcaactgcggcgagggcacccagcgggcc
atgcaggagcacaagctgaagatctcacacctggacagcatcttcctcagccgggtgacc
tgggccaacgtcggggggctgccaggtatgattcttacattaaaggccatggggcttcaa
agatgtgttttcctggggccaccaaagctgcaaaactacttgaaagcgattcgactcttt
ccggggcctctgaaaaggatggatttagctgtgcaattgcacacagagcctgagtataag
gatgagacgatgacagtccaccagatacctcttacaggaaaaccactagctgctgaaagc
gtgttgcctcagagtcctggagcatcaacccaaggtggaaatagccctaaaggggacaca
gggcctggatccccaagagctgcccagcaaaacttggagaagggcaaggaaaaagaaagc
ccaaagaaaacaggtgacaaacagaagtgtgcgagcaggcatcccgatgtggtgatggct
ttcctgtgcaaaattcacccaaagaagggaaaattcctagcagctaaagcgcaggagatg
ggcctgccagtgggaactccagccatccttcccataattacagctctcaaaaatggggag
agcatcacttttgaaggcagagagctctttcccgaagatctgtgcactcctactgatcct
ggcccggcattcattgtgctggagtgtcctcacgagggttttgtggacgccgtctgcgaa
aacgagaccttccgaaggtaccaggagggacatcctgagaaccaggtggccttggttatt
cacatgactccagagtcggtgctgcgagacagccgctaccagcaatggctggaaagattt
ggacctggaactcggcacatggttctcaatgagaattcctccacggtgcacaacccacgc
agctacaagatccaaactcagctgaacctcatccacccagagatcttccctctgctcacc
acctaccagagcaaggaagaagaggctgtgtgtagcgtgcccattgtgcgaggagagtgc
ctcttgaaataccacttcagaccacagcaggagtggcagagagatgctgtgactgtctgc
gaccacaatgcgtttgtgagtgaagccttggatctccccaacttccagactcgcgtgaag
gagtgcaaagagagcctgtccgctgcgccaggaaatgtgagtgcttatcctgaaattgtg
ttcctgggaacaggatctgcaattccaatgaaaatccgaaatgtcagttccacactggta
aatacgagctctactcagtccctgctcttggactgtggagaaggaacgtttggacagctc
tgtcgccactatggagagcaagttgaccaagtgctgtgtaacatagcagctgtgtttgtg
tctcacatgcacaccgaccatcattcggggttgttgaacatcctgatggagaggcggaga
gcttttgcaggccttggccaggctttcagccctctgtttctggtagcacctgaacagatc
ctgccttggctacatgaataccacaaccactgtgaagaaattcttggagacatcaaaatg
attccttcccagtctctcgtgaagggctgtgagaacatcagacctaaagccaaagggttt
gtcagttctctgttagagagctacgacctggctgagtttcagacttgtgaagtccagcac
tgtaaaaatgcttttgcatgttcaatgctccacaaatctggctggaaagtagtctattct
ggtgacacgatgccctgcatggccttagtagaaatgggtaaaaatgcgacgctgctgatc
catgaagcaacgttggaagatggcatggaaaaagaagctatagagaagacgcacagcaca
acctctcaggcgattcagaccgggatgaagatgaatgctgggttcatcatgcttaatcac
ttcagtcagagatacgccaagatcccgctgttcagcgaagacttcagtgagaaggtcgga
attgcattcgatcacatgaggatacgttttggtgactttccaaccatcccgaagctgatc
tcgcctctcaaggctttgtttgcggatgacatagtagaaatggaggagcggaaggaaaaa
cgggagatgcggcttctgaaggagaccgctatagtcctggacaaactggctgctgccgag
aacaaggaagcgccgtaccagaaacggaaacaaaccaagaaccaccaggagctatccaac
aagaaactgaaaacagtgaactga
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