Caloenas nicobarica (Nicobar pigeon): 135996055
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Entry
135996055 CDS
T11056
Symbol
HGS
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03250
Viral life cycle - HIV-1
cnic04144
Endocytosis
cnic04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135996055 (HGS)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135996055 (HGS)
04145 Phagocytosis
135996055 (HGS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135996055 (HGS)
Membrane trafficking [BR:
cnic04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
135996055 (HGS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
UIM
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
135996055
NCBI-ProteinID:
XP_065503829
LinkDB
All DBs
Position
18:complement(410051..418778)
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AA seq
753 aa
AA seq
DB search
MGRGGGTFERLLDKATSQLLLETDWESILQICDMIRQGDTQAKYAVNAIKKKVNDKNPHV
ALYALEVMESVVKNCGQTVHDEVANKQTMEELKEILKRQVETSVRSKILYLIQAWAHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVVTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEHLNKKAEGKSAASELPPEYLTSP
LSQQSQLPPKRDETALQEEEELQLAIALSQSEAEEKERMRQKTTYSMYPKAEPTPVTSSA
PPVSTLYSPPVNSSAPLAEDIDPELARYLNRNYWEKKQEEVRKSPTPSAPLSLTEPAAQP
GEAHPPPLGVVEQQYQNGESEENHEQFLKALQNAVTTFVNRMKSNHMRGRSITNDSAVLS
LFQSINNMHPQLLELLNQLDERRLYYEGLQDKLAQIRDARGALNALREEHREKLRRAAEE
AERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQEKERQLRLEQQKQTIQMRAQMP
AFSLPYAQLQAVPAASGVIYQPSGPTSFPSTFSPAGSVEGSPMHGVYMNQAAQGSSGPYS
AMPVAGTDPSMVNAYMYQPGTGSGQAAPQGPAVPTTTPAYSSYQPTATQGYQSAASQSQS
IPAISQAPQAGTMGYMGSQSVSMGYQPYSMQGLLSALPGQDAALSSLPAQPYLPGQQPLY
QQMAPAGGAPQQPQPPPAQPPQGSGEAQLISFD
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggcggcggcaccttcgagcggctcctcgacaaagccacgagccagctgctg
ctggagaccgactgggagtccatcctgcagatctgcgacatgatccgccagggagacaca
caagcaaaatatgctgtcaatgctatcaagaagaaagtcaatgacaagaatccccatgtg
gctctctacgcgctggaggttatggagtcggtggttaaaaactgtggccaaacagtccat
gatgaagtggccaataaacagactatggaggaactgaaggaaatactcaagcggcaagtg
gagacaagtgtccgcagtaagatcctgtacctcatccaggcctgggctcacgccttccgc
aacgagcccaagtacaaggtggtgcaggacacctaccagataatgaaggtcgaagggcac
gtgttcccggagttcaaggagagcgatgccatgtttgctgcagaaagggctcccgactgg
gtggatgctgaggagtgtcacaggtgccgggtgcagtttggtgtcgtgacgcggaagcat
cactgcagggcctgcgggcagatcttctgtggcaaatgctcctccaagtattccaccatc
cccaaattcgggattgagaaggaagtgcgagtctgtgagccctgttacgagcatctcaac
aagaaagctgagggtaaatctgccgcctccgagctgccccctgagtacttgaccagcccc
ctctcacagcagtcccagctgcccccaaagcgtgacgagacggctctgcaggaggaggag
gagctgcagctggcgatcgccttgtctcagtctgaggctgaggagaaggagagaatgagg
cagaaaaccacctactccatgtacccaaaggccgagcccacacctgtcacctcgtcagcg
cccccggtcagcacgctctactccccgcccgtgaactcctctgctcccttggctgaggac
attgacccggagctggctcggtacctgaaccgcaactactgggagaagaaacaagaggag
gttcgcaagagccccacgccgtcagcacccctgtcactcactgagcccgctgcgcagccg
ggggaagcccacccccccccactcggggttgttgagcagcagtaccagaacggcgagtcc
gaggagaaccacgagcagttcctgaaggcgctgcagaatgcggtcaccaccttcgtcaac
cgcatgaagagcaaccacatgcggggccgcagcatcaccaatgactcagctgtgttgtcc
ctcttccagtccatcaacaacatgcacccgcagctgctggagctgctcaaccagctggac
gagcgcaggctgtactacgagggcctgcaggacaaactggcccagatccgggatgcgcgt
ggggctctgaatgcgctgcgggaggagcatcgggagaagctgcgccgcgcggcggaggag
gcagagcgccagcgccagatccagctggcccaaaagctggagatcatgaggcagaagaag
caggagtacctggagatgcagcggcagttggctatccagcggctgcaggagcaggagaag
gagcggcagctgcgcctggagcagcagaagcaaaccatccagatgagagcccagatgccg
gccttctctctgccctatgcccagctccaggctgtgcccgcagccagtggggtgatctac
cagccctctgggcccaccagcttccccagcaccttcagcccggccggctcagtcgagggc
tctcccatgcacggcgtgtacatgaaccaggcagcgcaggggagctcagggccatacagt
gcgatgcccgtcgcagggacagatcccagcatggtgaacgcctacatgtaccagccgggc
acgggtagcgggcaggcggctccgcaggggccggcggtgcccaccacaacccctgcctac
tcctcctaccagcccacggcaacacagggctaccagagtgcggcctcgcagtcgcagagc
atcccggccatctcgcaggccccccaggcgggcaccatgggctacatgggcagccagtcg
gtctccatgggctaccagccctacagcatgcagggcctcctgtccgcgctgccggggcag
gacgcggcgctgagcagcctccccgcccagccctacctgcccgggcagcagccgctgtac
cagcagatggcacccgcgggaggggccccccagcagccccagccgccgccggcgcagccg
ccgcagggcagcggggaggcccagctcatctccttcgactga
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