Caloenas nicobarica (Nicobar pigeon): 135996223
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Entry
135996223 CDS
T11056
Symbol
CFAP54
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cnic03037
]
135996223 (CFAP54)
Cilium and associated proteins [BR:
cnic03037
]
Motile cilia and associated proteins
Sperm associated proteins
135996223 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
135996223
NCBI-ProteinID:
XP_065504097
LinkDB
All DBs
Position
1:complement(45733188..45846288)
Genome browser
AA seq
3179 aa
AA seq
DB search
MAEPAGPPFPVPQPLPATFFGAVAPGNPVLDSFEAELRDVLGSLRRLGGAAGAKPQQHDL
HRRGANTLFNIWIKYRPRLPEWYYNEKLLKVGDSLAQIKEYKLALLQCYGRYLQQFVSVN
LDDIVDDVHQFKSTFFPNGIRDKNAAHTFHALQERNVCIYQLVCSSDRNLQNQESLQTCF
NVLSSLRVTMQVALPQESLCWLIYNGTIHIYTICRHLMMRGQSAKVLEYLLWASICMESS
IPLLSVHYLTWRATLYTAVSQCYFDCQVGIHGEVFARRGLIKIDELKQLENISSSLENSE
AKKIFREATLKMSVMIFKRAVYESRRKPKSSFRPKLRVSLKEMQNLSWPRTTTERLLTEM
FDGAAAQFLAILEALSDSSRHVLQPAPPVPDETEIRGVISELFLAGLEILSGGVSSTGIQ
GNHCTDHFCIINASSTLLQLILAGEKGVSGDAAVKFIKLAFSYEEWDVFDSATEFVVNFL
QAQNDPKWKKAEVELKLLTLVQPLLFPGKFKHGLSIGENNTKEASMSHDSEKRQTSRSEX
DSLKHGEPSHDLMILARTVFSCVCTPKQNIHPDKEILVDVILFLWQKCKTGLQRIQMGGS
DYLKSMHKYKAYQWVRVLWIINEVIHKSSIADTDAVMLAEVTLRLTAILENVADSTSKSK
KKKGKRNAPLSQDETCDIPEILMKSPTEQLQVAYESLEKAINGMNTCRLMTLLPDGKSIF
DSCCTKVDSNDQNLNSGLGCGNDKTGTGDGFVMDLHLELIQAQHRVAVKLLKMTQGAQKC
DRTLKSKKSHVKNMKDYYLTEALIMRKIKKNKLSRAIFLMQKAAQKFPEYLTTSSQRKLL
EEALTLIEQVEAEQSALYHSLKEAMSSNKKNGTTPPPPLLLSRSHCSMTFKPASFSSDIQ
VSWYSILGCVAEERNVKVRLNNNKLQNAGEEIPADGKSLLEIQGLDPNEKYVFAVAAYSS
DGKLIGDAIGETTQPILAYPPLSVTAVRAYLTQAAYQTGNYTLAREAFSPMWDYFVSNSF
PLPANAAVVSASRNLTISENRLCFEAVSQTSPITLHLFLRSLFAVCDINVMEGRLFCDSI
CSNEILYKEQVARLAECERMTVAIELSNWLNDASYTLQSVVQCYGLLAPIIYHKISSVPV
VQILIKCLAVLQEIPSAALQRKHVGCYESIQHMIACTSFYTAKVLRSWKEYELAVIIVNY
GKKLLDSSPAASPDLSGAMKTEETHTNKEVKSTSSKASHLAAREKATENLNALESILLRL
TKPGRGPRLTGREDPLFLYPVISCWTSNNAYREVMKFKNKPRFLEFFVQVLYKILNEEMF
QCVLEWADNVQVYLKRRNDHLLSINGISTEETSSPTLSEGMATSAKGAVGFQKRVETSPL
KKPEASTVKKPKKEVSSRKNNPLRQYLMKHPDVMESPEAQRKGQEQLQKVAHQTLVLLLN
PIVRDYLNRKKFHQICLEEMPWRSQMNIYLAVAHYNLFKKKLEEQYQVGICGSQHLESYN
ILDPYVYSLSNAGTVVLRESEEKDIGTPSLHLLKKPGMTKKETCKDKSSDRSTKLRGTNT
PPTQTTETSVSHSPKEYHQFPPNTVLLEHFTKILLHLRRAVVLAHRGGHWTLLQNACREL
WNYARDFQYIANLLRSHMDAFPITRNFLRKTLWLPFYLASDTIIDMINELQTSRSLKIVD
PEGDFCIPSCLGGITDENGGSNLHPQSPVDDVNVVDLKWICKLIRRTIALLYQMKKWEAL
VHITVQFNIFTHERYTEQVGPLLVYAQRQLLERIQQFSDPCSHESHFMKHLSDNADKMTC
RNYIGQKLLLPVAPSASEQIFHGCFFYSEMKNDDTDCCQAKALAYVPLDVKDTLKCFRET
LQKSKYHSRALRHSRKLLSLFLAYTQESYGRPSSSHISSKRRLDFNLGAELIYLPTPPDL
SQEKFNFSSIVESKPIPQSQLSVVISSYEQTIEILEIYKQRDLKVQALHELGNLHFYTGN
KRAAFKYWCQALDETLNIADALKNWREFGFPKNPTDCFAVGRLADISQKFLSQAGVWGCL
LAAVLVAKIAQYITTSNMRLRAKYCYFSAILFKTLFRASLPHPTSDCDFAQYETNMLVPG
IDLFSDHFRADISTVVASLNFIMFELHCTNQNLIILPLLTLYQYLVSEICKEPAKCIEGR
IFKIKVLTDIGFFTEAFHELSSLNCGERIPWKIPAGYRKIEQTKALQKFDSSKPLLTVTN
LQVLEDIFNGSLSSTMVPLCNQQIMNKLTLAKMNLIICLSATINNIPEKVEKHISSVDNN
SLKGPSRITASKVKADADKDSRQQGQRGTMVQLVDCKDVLNLAILKGILLTEAEESLSHL
VQNIQDKYNGETSLCSAEDLETLVEAKLQLAAIFQQRHLAAFSVALAFSAIRLLQNAKIL
RMEMTPFQEKKNDRKRLDSHIEDVQLPRSVTAQDHMNVHLWLRCRTMLVTALVTQIHSVG
DIEENDVAEHRNVIKEVILEAEAFGDIETQAEMMVQAAILDLQEKRPVAGIKLLLQNIIS
LLQEDTFISPPASLTLVRSMLLLADILTLQTVEDSEHCSSTVEPLNLLILAHELTIEAIF
VCGEPIERQIEDSTLTCLVLPTKNIYLPHINLLAQVKMRIGHALAEKVACTPERGDTLQW
LHALKHLESALKLCRASATKKIDMEAELLFQIGKVERQITEAGNNKSSQAVETLLEAIKL
SQQHDQKFELIRRSYLEIALLYLHLARNNEDVSQTDKMVPSKSNITPEEALKSGGYKVQA
WIAVRAATQVSEAVLASQLLIGMKSVKEHSMKEAVQQKIPEFASMDLLASYRDFLSDGAN
VVSESPEESSTENKQIMQDEQSQREGIETLATKASQKKQAITWVHLVHYHSYLKRLYNMN
LLFDAPNSGPGSFSARAGHLSSVFDTGIVLRIAEMHSFLKKHLFEYSTCCLENFPEELRD
VELLLGRPTDSSKMSLEITGTTPTMSCVRRASPVSVTVEADRQMESRAAHASNKEINIQW
YLPSLAGPSNNSETKVLLLYAYNTKPIKISNIKIFSSMSMFSGHLWIPLARIISLREKLS
NLKQQVEMLMQNSKSLSSASEPMSFLGQSETLKIIPSKNPKMNAAKVHLDEKTEEMAKRC
LSEVKALLSPVPALSLPLTEIPFDVTLQSIASLEDMFDPASGCIITEQSLFNWIISLFH
NT seq
9540 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccgccgggccgccgttcccggtcccgcagcccctgccagccactttcttc
ggggccgtggcgccgggcaacccggtgttggacagcttcgaggccgagctgcgggacgtc
ctgggctccctgcggcggctgggaggcgcggcgggggccaagccgcagcagcacgacctg
caccgccgcggagcaaatactctgtttaatatttggatcaaatataggcctcgactgcca
gagtggtattacaatgaaaaacttctgaaagttggtgattctcttgctcagatcaaagaa
tataagttggcacttctacagtgctatggaagataccttcagcagtttgtttctgtaaac
cttgatgatatcgtagatgatgtgcatcagtttaaatccaccttttttccaaatggtatt
agagacaaaaatgcagcacatacgttccatgctttgcaagagaggaatgtttgcatttac
cagctggtttgcagcagtgacagaaatctccagaatcaagagtccctgcagacttgtttc
aacgtcttgtcctcattacgagttactatgcaagtggctctacctcaggagagtttgtgt
tggcttatctacaatggtactattcatatttacaccatatgcagacatttgatgatgaga
ggtcagtctgctaaggttctggaatacttactgtgggccagtatatgtatggaatcatct
attccgctcttatctgtacattatttgacgtggagagccaccctatatactgcagtttct
cagtgttattttgattgtcaagtcggcattcatggagaggtgtttgctcgccgtggtctg
attaaaattgatgaactgaagcaattagaaaatatcagttcatcactggaaaattcagag
gcaaaaaagatttttagagaggccactctaaagatgtcagtaatgattttcaagagagca
gtatatgaatccaggagaaagccaaaaagttcctttcgacctaagttaagagttagcctg
aaagaaatgcaaaatctgtcgtggcctcgcactactactgaacggctgctgacagaaatg
tttgacggtgccgcagctcaattccttgccatcctggaagctctgtctgatagtagcagg
catgttctgcagcctgctccacctgttcctgatgaaactgaaattcgtggtgtaatttca
gagctttttctggcaggtctggaaatcctctcaggtggagtgagcagtactggtattcaa
ggaaatcattgcactgatcatttttgtataattaatgcatcatcaacccttctgcagttg
atactagcaggagaaaagggtgtgtctggagatgctgctgtgaaatttataaaactagct
ttcagctatgaagagtgggacgtgtttgattctgctactgaatttgttgttaattttcta
caggctcaaaatgatccaaaatggaagaaagctgaagtggaactgaaacttcttacactg
gtgcaacctttactatttccaggcaaatttaaacacggtttgtctattggtgaaaacaac
accaaagaagctagcatgtctcatgattctgaaaaaaggcaaacatccagaagtgagtag
gattctttaaagcatggagagccttctcacgatcttatgattttggcaagaacagtgttt
tcatgtgtctgcacacctaagcagaatatccatcctgacaaagaaatacttgttgatgta
atactgtttttgtggcagaagtgtaaaacgggacttcagcgaatccagatgggtggaagt
gactacttaaaatctatgcacaaatacaaagcttaccaatgggttcgtgtactctggata
ataaatgaagtaattcacaagagtagcatagcagacactgatgctgtaatgcttgcagag
gtaaccctacgtctaactgcaatattggaaaatgtagctgattctacaagtaagtctaag
aaaaaaaaaggaaaaagaaatgcccctctctcacaagatgaaacctgtgatattcctgaa
atactgatgaaaagtcctacagaacaattacaagttgcttatgaaagtcttgaaaaagca
attaatggaatgaacacatgtcgcttaatgacccttctaccagatggaaagtcaatattt
gacagctgctgtacaaaggtggactcgaatgatcagaatttgaattctggtttgggatgt
ggtaatgataagacaggaacaggtgatggttttgtaatggatttacacttggagctcata
caggcccaacatcgagtagctgtgaaacttcttaaaatgacacaaggtgctcaaaagtgt
gacagaactctgaagtctaagaagtctcatgtgaagaatatgaaagattattatttaaca
gaggcacttataatgagaaaaataaaaaagaataagctatccagagcaatctttttgatg
caaaaagctgcacagaagttccctgaatatttgaccacttcttcccaaaggaagctactg
gaggaagcactaactttaattgagcaagttgaagccgaacaaagtgcattgtatcacagt
ctcaaagaagctatgagcagtaacaaaaaaaatgggacgactcctcctcctcctctatta
ctttccagatcacattgctccatgacatttaaaccagcctcattctcctcagatattcag
gtttcatggtacagtattttggggtgtgtagcagaagaacgtaatgtgaaagtcaggtta
aataacaataaacttcagaatgcaggagaagagataccagctgatgggaaaagcctcttg
gaaatacaaggcttagatcctaatgagaaatacgtatttgcagtcgcagcatattcttct
gatggaaaacttattggtgatgcaattggggaaacaactcagcccatccttgcatatcca
cctctttctgttactgctgttcgggcctatctaactcaggcagcctatcagactggcaac
tatacattagccagagaagcattttcaccaatgtgggattattttgtttcaaattctttt
ccactgcctgccaatgcagctgttgtttctgcaagtagaaatttgactatatctgaaaac
aggctatgttttgaggctgtatctcagacttctcctattaccttacacctcttcttaagg
agtttatttgctgtctgtgacattaatgtcatggaaggaagactcttctgtgattccatc
tgttccaatgagatactttataaggaacaagttgctagattagcagaatgtgaaagaatg
actgtggcaattgaactgagtaattggttgaatgatgcaagttataccctgcagtctgtt
gtacaatgttatggtctccttgctccaattatttatcacaagatttcttcagtcccagta
gttcagattctcattaagtgtttggctgtccttcaagaaattccaagtgctgccctgcag
aggaagcatgtaggatgttatgagagtattcagcatatgatagcttgtacttcattttat
acagcaaaggtactacgttcatggaaagaatacgaactagccgtaattattgttaactat
gggaaaaaattgctggattcctcaccggcagcttcacctgacctgtcaggagctatgaaa
actgaagaaacacacactaataaagaagttaaaagcacttcttcaaaggcatcccattta
gctgcaagggaaaaagcaacagaaaatctaaatgctcttgaatcaattctcctcagactg
accaagccaggtcgtggaccaaggcttacggggcgtgaagatcctttgttcctctaccct
gtaatttcatgttggacatcaaacaatgcttatcgagaagtgatgaaattcaaaaataaa
ccacgttttcttgagttctttgtacaagttttgtacaaaatcctgaatgaagagatgttt
cagtgtgttctggaatgggcagacaatgtgcaagtctacttgaaaaggaggaatgaccac
cttctctctatcaatggaatttcaacagaagaaacaagttctcctactctgtcagaaggc
atggcgacatctgctaaaggagctgtggggtttcagaaacgtgtagagacctcaccttta
aagaaaccagaggcatcaactgtgaagaaaccaaaaaaagaagtctcgagtcgaaaaaat
aatcctcttagacagtatttaatgaaacatccagacgtaatggaatctccagaagcacaa
aggaaaggccaggaacagttgcaaaaagtagctcatcaaaccttagtgttactgctgaac
ccaattgtgcgtgattacttaaaccgaaagaagtttcatcaaatatgtcttgaagagatg
ccctggaggtctcagatgaatatctatctggcagttgcacactacaacttatttaaaaag
aaactggaagagcaatatcaagttggaatttgtggttcgcagcatctggagagttacaat
attttggatccttacgtatactcattaagtaatgctggcaccgtagttttgagagaatcc
gaagaaaaggacataggaacaccaagtcttcatctccttaaaaagccaggaatgaccaaa
aaggaaacttgtaaggataaatcatctgaccgcagcactaaactgagaggaacaaatact
cctccaactcaaacaacagaaacatccgtatctcattcccccaaagaataccaccagttt
ccgccaaatactgttttattggagcattttacaaaaatcttgttgcatttaagaagagca
gtggttcttgctcaccgtggtggccactggacgttgcttcaaaatgcttgtcgagaactt
tggaactatgctcgagatttccaatatattgctaaccttttacgttcccatatggatgca
tttcccattacgaggaattttcttaggaagaccctctggttgccattttatttggcatca
gatacgatcattgatatgataaatgagctacaaactagcaggtctcttaagattgtggat
cctgaaggagacttctgcattcccagttgtttaggaggtattacggatgagaatggtggt
tctaatctccatccacagtctcccgtggatgacgtgaatgtggttgacttgaaatggata
tgtaaactgattcgtagaacaatagcattgttatatcaaatgaagaagtgggaagcactg
gtacacatcactgtacaatttaacatatttacacatgagagatacacagaacaagtgggt
ccactgctggtgtatgctcagaggcagctgctggaaaggatacagcaattcagtgaccca
tgcagccatgaatctcatttcatgaaacatctgtctgataatgcagataagatgacttgc
agaaactacatagggcagaaattactgctgcctgttgccccttctgctagtgaacaaatt
tttcatggatgctttttctattctgagatgaaaaatgatgacacagattgctgtcaagca
aaagctctagcttacgtacctcttgatgtgaaagatacactgaaatgttttagagaaact
ctacaaaaatctaaatatcacagcagagcactgagacacagcagaaaactgctttcatta
tttcttgcatacacacaagaaagttatggaagaccaagcagcagtcatatctcttcaaag
agaaggctggactttaatctgggagctgaactgatatatctaccgacaccacctgacctt
tctcaagaaaaatttaatttctcctctattgttgagagtaaaccgataccacagtcacag
ctttcagtagttatctcctcctatgaacaaacaattgaaatccttgaaatatacaagcag
agagacctcaaggttcaggctctacatgaacttggaaatcttcacttttatactggaaac
aaaagagcggcttttaaatattggtgtcaagcccttgatgaaacactcaacattgctgat
gctcttaaaaactggcgagagttcggtttcccaaaaaatcctacagactgcttcgcagtt
ggaagattggctgatattagtcagaaatttctttctcaggctggagtttggggatgttta
cttgctgcagtcttagtagctaagatagctcagtatataacaacatcaaatatgagatta
agagctaaatactgctatttttctgctatactttttaagaccctgtttagagcttctctt
ccacatccgacatctgactgtgactttgcacaatatgaaacaaatatgcttgttcctggt
attgatttgttctccgatcacttcagagctgatatctctactgtggttgcaagtctgaat
ttcattatgtttgaactacattgtacaaaccaaaatttaataattttaccattgttgacg
ttatatcaatacctggtttccgagatttgtaaggaaccagctaaatgtattgaaggaaga
atcttcaagattaaagtacttacagatataggattttttactgaggcctttcatgaactg
tcttcacttaattgtggagagagaattccatggaaaatacctgcaggatacagaaaaatt
gaacaaacaaaggccttacagaaatttgactcttcaaaacctcttctgactgttacaaat
ttacaggtactggaagacatatttaatgggagtctttcttcaacaatggtgccactgtgc
aaccagcaaattatgaataaattaactttagccaaaatgaatttaataatttgcctttct
gccacaataaataatatacctgaaaaagtggaaaaacacatctcttctgttgataacaac
agtttgaaggggccaagcagaattacagcttcaaaagtaaaagctgatgctgataaggat
tcaagacaacaaggacaaagaggcacaatggtgcagcttgttgactgtaaagatgtatta
aatttggccatcctgaaggggattttattgacagaagctgaagaaagtcttagccatctt
gtgcagaacatacaggataaatataatggggagacatctctgtgttctgctgaagattta
gagactcttgttgaggccaaacttcagcttgctgctatttttcagcaaaggcatctagcg
gctttcagtgtcgctttggctttctctgcaattcgacttctacaaaatgccaaaattctt
aggatggaaatgacaccttttcaagaaaaaaagaatgacaggaaacgtttggactcccac
attgaagatgttcaactgcctcgcagtgtaacagcacaagatcatatgaatgtgcatttg
tggctacggtgtcgtacaatgttagtgactgcactagtaacacagatacatagcgttggt
gacatagaagagaatgatgtggctgaacacagaaatgtgataaaagaagtaatactagaa
gcagaagcatttggtgatattgagactcaggctgaaatgatggtgcaagctgctattctt
gacctgcaagaaaaacgtcctgtggcaggcattaaacttcttttgcagaatatcatcagt
ttactccaagaagatacatttatttcccctccggcttccttgactctagtgagaagtatg
ctcctgctggcagacatcctaacactgcaaacagtagaggattctgaacattgctcttct
acagtggaaccattaaacttactaattttggcacatgagcttacaattgaagcaattttt
gtctgtggagaacccattgaacggcaaatagaagacagcacattgacttgcctggtccta
cctacaaaaaacatctacttgccacatatcaacttgctagcccaagtcaaaatgagaatc
ggacacgcattagctgaaaaagtagcttgtacacctgaaagaggagatacactgcaatgg
ctacatgctctcaaacatttagaatcagcattgaagctttgcagagcatctgcaacaaaa
aaaatagatatggaagctgaactcctttttcagataggtaaggtagaacgccagataact
gaagcaggcaataacaagtcatctcaagctgttgaaaccctcttggaagctataaaactc
agccagcaacatgatcaaaaatttgagttaataagaagatcataccttgaaatagcacta
ttatatttgcatttagcgagaaataatgaggatgtgtcacagacagataagatggtgcct
tccaaatcaaacatcactcctgaggaggctctgaaatcaggaggctacaaagtacaagcc
tggattgcagttagagcagctacacaggtcagtgaagctgtgcttgcttctcagctatta
attggaatgaagagtgttaaagaacacagcatgaaggaggcagtgcaacagaaaatccca
gaatttgcttccatggatcttcttgcttcatacagagatttcttatccgatggagccaat
gttgtctctgaaagtcccgaagaatcttctaccgaaaacaaacaaatcatgcaagatgag
cagagccaaagagaaggaatagaaactcttgccaccaaggccagccagaagaaacaggca
ataacatgggtgcacttagttcactaccacagttatttaaaaagactttataacatgaac
cttctatttgatgcccctaactcagggcctggatcattttctgcaagagctggacacctt
agttctgtttttgacacagggattgttctacgcatagcagaaatgcattcctttcttaaa
aaacatttgtttgaatattcaacgtgttgtcttgagaatttcccagaagagctacgtgat
gtagaattgctacttggtaggccaactgattcttcaaagatgtctcttgaaattactgga
actacaccaacgatgtcatgtgtgagaagagcttctccggtttctgtcactgtagaagca
gacaggcagatggaaagcagggcagcacatgcttcaaataaagaaattaacattcagtgg
taccttccttctctggcagggccatcaaacaattcagagactaaggttttgctgctttat
gcttataatacaaagcccatcaagattagcaacatcaagattttcagttcaatgtctatg
ttttcaggccacttgtggattccattggctagaattatttctttacgggagaaattatct
aatctaaagcagcaagttgaaatgttgatgcaaaattctaaaagcttgtcttcagcttca
gaacctatgagttttcttggacaaagtgaaactttgaaaataattccttcaaaaaacccc
aaaatgaatgctgcaaaagtgcatcttgatgaaaaaacagaagaaatggctaaaaggtgt
ttatctgaagtcaaagcactgctgtctcctgttccagccctgtccttgccattaactgag
atcccatttgatgttactttgcaatcaatagcaagtttggaagatatgtttgatcctgcc
agtggatgtataataactgaacaaagtctcttcaattggatcatttctctgtttcactaa
DBGET
integrated database retrieval system
