Caloenas nicobarica (Nicobar pigeon): 135996241
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Entry
135996241 CDS
T11056
Symbol
UTP18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135996241 (UTP18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnic03009
]
135996241 (UTP18)
Ribosome biogenesis [BR:
cnic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135996241 (UTP18)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
NBCH_WD40
KNTC1_N
MRP-L28
PEP5_VPS11_N
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
135996241
NCBI-ProteinID:
XP_065504124
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Position
18:5961973..5973714
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AA seq
563 aa
AA seq
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MGVVAEAPRMGPAAAGATPKKKTKKITKKITKKTTKKITKKTMKQITKKTMKQLQPRAEA
AAAQQAAEESARRARHLSALSRPSGPERELEELVFGDSLNVEEDELLQRLAGPQRREAAE
RSLRRDSSDSEVENEAKGELLPKKPAWVDEDDEAEENVDMTHKYRKDFMKSDAEKVLTKK
KLKRRLEEQFQQAMGGVPAWADLENRKKSKGPASDGESDEDNDLLCRTGNFISNSESLPR
GILKMSTCLPANQERFANGKLVTVQFHPSAQVVMTAGHDRSVSLFQVDGIRNPKIQSIYL
ESFPIYKACFSVDGEQVIATGTHHKMFFVYDMMSGSIIPIEKVRGVEERFLKNFEVSPDG
SFMLLTGTSGYLHLLSMKTKELISTMKVNGRCTASAFTPDSSKIYSYSKEGEVFIWDVRS
RKCLHKFEDEGSLEGKCIAVSKNNQYVACGSASGVVNLYTTDVCLKENRPKPVKAIMNLV
TSATCVTFNPTTEILAVASREADEAVKLVHIPSYTVFSNFPVFRRKQIYLAQSMDFSPRS
GFFSVANNKGKALLFRLKHYSDF
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcgtggcggaggcgcctcggatgggcccggcagcggccggagcgacgccgaag
aagaaaacgaagaaaataacgaagaaaataacgaagaaaacaacgaagaaaataacgaag
aaaactatgaagcaaataacgaagaaaactatgaagcagctccagccgcgggcggaggcg
gcggcggctcagcaggcggcggaggagtcggcccggcgcgcccggcacctcagcgccctg
tcccgcccgtcgggtccggagcgggagctggaggagctggtgttcggggacagcctcaac
gtggaggaggacgagctgctgcagcgcctggccggcccccagcggcgtgaggctgcagag
agaagtctgcggagagactccagcgattcggaagtagaaaatgaagcaaaaggtgaattg
ctacctaaaaaaccagcctgggtggatgaagatgatgaagctgaggaaaatgttgatatg
acccataagtataggaaagatttcatgaaaagtgatgctgagaaggtacttactaagaaa
aagctaaaaagacgacttgaagaacagtttcagcaagctatgggaggagttcctgcctgg
gctgatttagaaaacaggaagaaatccaaagggcctgcaagtgatggtgagagtgatgaa
gataatgatctgctgtgcaggactggcaactttatatcgaactcagagtccctgccaaga
ggtattctgaagatgagcacctgcttacctgccaatcaggaacgttttgctaatggaaag
ctggtgactgtgcagtttcatccatctgctcaagtagtgatgactgctgggcatgatcga
tccgtgtcactctttcaggttgatggtataaggaatccaaaaatacagagcatctattta
gagagttttccaatctataaggcttgtttcagtgttgatggagaacaagttatagccact
ggtacccaccataaaatgttctttgtgtatgacatgatgagtggaagtatcattcctata
gagaaagtaagaggtgtggaggaaagatttctcaaaaactttgaagtctctccggatgga
tcatttatgctactcactggaacttcaggttacctccacttgttgtcaatgaagacaaag
gaactgattagcactatgaaggtaaacggaagatgcactgcgtctgccttcactccagac
agcagtaaaatatatagctattcaaaggaaggtgaagttttcatctgggatgtgagaagc
agaaagtgtctacacaaatttgaagatgagggttctttggaaggaaagtgcattgctgtt
tcaaaaaataaccagtatgtggcatgtggttcagcttccggagttgtaaatttatatact
actgatgtctgtctcaaagagaaccgtcctaaaccagttaaagccataatgaaccttgtt
acatctgctacatgcgtgaccttcaatcccaccacggaaattttggcggtggcttctcgt
gaagctgatgaggctgtcaaactggtacacattccttcatatactgtattctcaaacttc
ccggtgttcagaagaaagcagatttatcttgctcaatctatggacttttctcccagaagt
ggttttttctctgtagcaaataacaaaggcaaagctttgttatttaggctgaaacattat
tcagatttttaa
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