KEGG   Caloenas nicobarica (Nicobar pigeon): 135996241
Entry
135996241         CDS       T11056                                 
Symbol
UTP18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    135996241 (UTP18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cnic03009]
    135996241 (UTP18)
Ribosome biogenesis [BR:cnic03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    135996241 (UTP18)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N NBCH_WD40 KNTC1_N MRP-L28 PEP5_VPS11_N Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 135996241
NCBI-ProteinID: XP_065504124
LinkDB
Position
18:5961973..5973714
AA seq 563 aa
MGVVAEAPRMGPAAAGATPKKKTKKITKKITKKTTKKITKKTMKQITKKTMKQLQPRAEA
AAAQQAAEESARRARHLSALSRPSGPERELEELVFGDSLNVEEDELLQRLAGPQRREAAE
RSLRRDSSDSEVENEAKGELLPKKPAWVDEDDEAEENVDMTHKYRKDFMKSDAEKVLTKK
KLKRRLEEQFQQAMGGVPAWADLENRKKSKGPASDGESDEDNDLLCRTGNFISNSESLPR
GILKMSTCLPANQERFANGKLVTVQFHPSAQVVMTAGHDRSVSLFQVDGIRNPKIQSIYL
ESFPIYKACFSVDGEQVIATGTHHKMFFVYDMMSGSIIPIEKVRGVEERFLKNFEVSPDG
SFMLLTGTSGYLHLLSMKTKELISTMKVNGRCTASAFTPDSSKIYSYSKEGEVFIWDVRS
RKCLHKFEDEGSLEGKCIAVSKNNQYVACGSASGVVNLYTTDVCLKENRPKPVKAIMNLV
TSATCVTFNPTTEILAVASREADEAVKLVHIPSYTVFSNFPVFRRKQIYLAQSMDFSPRS
GFFSVANNKGKALLFRLKHYSDF
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgggggtcgtggcggaggcgcctcggatgggcccggcagcggccggagcgacgccgaag
aagaaaacgaagaaaataacgaagaaaataacgaagaaaacaacgaagaaaataacgaag
aaaactatgaagcaaataacgaagaaaactatgaagcagctccagccgcgggcggaggcg
gcggcggctcagcaggcggcggaggagtcggcccggcgcgcccggcacctcagcgccctg
tcccgcccgtcgggtccggagcgggagctggaggagctggtgttcggggacagcctcaac
gtggaggaggacgagctgctgcagcgcctggccggcccccagcggcgtgaggctgcagag
agaagtctgcggagagactccagcgattcggaagtagaaaatgaagcaaaaggtgaattg
ctacctaaaaaaccagcctgggtggatgaagatgatgaagctgaggaaaatgttgatatg
acccataagtataggaaagatttcatgaaaagtgatgctgagaaggtacttactaagaaa
aagctaaaaagacgacttgaagaacagtttcagcaagctatgggaggagttcctgcctgg
gctgatttagaaaacaggaagaaatccaaagggcctgcaagtgatggtgagagtgatgaa
gataatgatctgctgtgcaggactggcaactttatatcgaactcagagtccctgccaaga
ggtattctgaagatgagcacctgcttacctgccaatcaggaacgttttgctaatggaaag
ctggtgactgtgcagtttcatccatctgctcaagtagtgatgactgctgggcatgatcga
tccgtgtcactctttcaggttgatggtataaggaatccaaaaatacagagcatctattta
gagagttttccaatctataaggcttgtttcagtgttgatggagaacaagttatagccact
ggtacccaccataaaatgttctttgtgtatgacatgatgagtggaagtatcattcctata
gagaaagtaagaggtgtggaggaaagatttctcaaaaactttgaagtctctccggatgga
tcatttatgctactcactggaacttcaggttacctccacttgttgtcaatgaagacaaag
gaactgattagcactatgaaggtaaacggaagatgcactgcgtctgccttcactccagac
agcagtaaaatatatagctattcaaaggaaggtgaagttttcatctgggatgtgagaagc
agaaagtgtctacacaaatttgaagatgagggttctttggaaggaaagtgcattgctgtt
tcaaaaaataaccagtatgtggcatgtggttcagcttccggagttgtaaatttatatact
actgatgtctgtctcaaagagaaccgtcctaaaccagttaaagccataatgaaccttgtt
acatctgctacatgcgtgaccttcaatcccaccacggaaattttggcggtggcttctcgt
gaagctgatgaggctgtcaaactggtacacattccttcatatactgtattctcaaacttc
ccggtgttcagaagaaagcagatttatcttgctcaatctatggacttttctcccagaagt
ggttttttctctgtagcaaataacaaaggcaaagctttgttatttaggctgaaacattat
tcagatttttaa

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