Caloenas nicobarica (Nicobar pigeon): 135996368
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Entry
135996368 CDS
T11056
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
cnic
Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135996368 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
Gurken_M
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
135996368
NCBI-ProteinID:
XP_065504312
LinkDB
All DBs
Position
19:9206920..9249691
Genome browser
AA seq
2549 aa
AA seq
DB search
MERLLAPGLLVLLLPALTRGLRCTQLAESCLNGGKCETFLNGTEVCQCSGAYVGERCQLP
NPCLSSPCKNAGTCTPVVRGSTVDYTCACRLGFTDELCLTPRDNVCISNPCRNGGTCDLL
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGHCVPFEAHYICRCTAGFHGANCKQDVN
ECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGDTT
YDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFTGSHCEIDIDECDPDPCHYGTCKDGIASFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCLCLKGTTGPNCEINLDDCASNPCDYGKCIDKIN
SYECTCEPGYTGRMCNINIDECSSNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGKCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGGPCKN
GGECRESEDYESFSCSCPSGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFT
GRNCDTDIDDCKPNPCHNGGSCSDSVGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPPGFTGSYCEH
DINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCAPAFTG
PECQYPASSPCTPNPCYNRGTCEFFGDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDI
IPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNAKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPAKNSQLYPMYVVV
AALVLLAFIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKP
STKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMAMGNSSRMAFDSVPPRLSHLPVSSPS
TAMSNAPMNFSVGGAAALNGQCEWLSRLQNGIVQNQYNPLRGNMQPGAHQQTQNLQHGMM
TTLHNSLPTTSLSQMMSYQAMPNTRLASQPHLMQSQQLQQMQQQQLQQPNLQPQQPPQPP
QQPPPQQPPPQHHNPSSNASGHIAQNFLGTELSQPDMQPVSGSSMAVHTILPQDSQMLPT
SLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPH
SNVSDWSEGISSPPTSMQSQLGHIPEAFK
NT seq
7650 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctggcccccggcctcctggtgctcctgctgcccgccctgacgcgaggt
ttacggtgcacacagcttgctgaatcctgcctcaacgggggcaagtgtgaaacttttctc
aacgggacagaggtgtgccagtgtagcggtgcctacgtgggcgagcggtgccagctgccc
aacccctgcctgagctccccctgcaagaacgccggcacctgcaccccggttgtgcgcggc
agcaccgtggactacacgtgcgcctgccgcctgggcttcaccgacgagctctgcctgacg
ccccgcgacaacgtctgcatcagcaacccctgccgcaacgggggcacctgcgacctgctg
acgctcagcgagtacaagtgccgctgcccgccggggtggtcaggcaaaacctgccagcag
gccgacccctgcgcctccaacccctgcgccaacgggggccactgcgtccccttcgaagcc
cactacatctgccgctgcaccgccggcttccacggggcaaactgcaagcaggacgtgaac
gaatgcaacatctcaccacccgtctgcaagaatggcgggagctgcaccaacgaggtgggc
acgtaccagtgctcctgcaagccggcgtacaccgggcagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacggggggacgtgccgccagatcggggacaccacc
tatgactgcacgtgcctgccagggttcacgggccagaactgtgaggagaacatcaatgac
tgtcccggcaacaactgcaagaatggaggcacctgcgtggatggtgtcaacacctacaac
tgccagtgcccgcccgagtggacaggtcagtactgcaccgaggacgtggacgagtgccag
ctgatgcccaacgcctgccagaacgggggcacctgccacaacaaccacggcggctacaac
tgtgtctgcgtcaacggctggacgggcgaggactgcagcgagaacatcgatgactgtgcc
atggccgcctgcttccagggggccacctgccatgaccgagtggcctctttctactgcgag
tgcccccacggccgcacaggtttgctgtgccacctcgatgacgcctgcatcagcaacccc
tgcaacgagggctccaactgcgacaccaaccccgtcaacggcaaagccatctgcacgtgt
ccctcggggtacatggggccagcctgcaaccaggacgtggacgagtgttcgctgggagcc
aacccttgcgagcacgcggggaaatgcatcaacacccagggctccttccagtgccagtgc
ctgcagggctactcaggccctcgctgtgagattgatgtcaacgagtgtctctccaacccc
tgccagaacgatgccacctgcctggaccagatcggggagttccagtgcatctgcatgccc
ggttacgagggggtttactgcgagatcaacacggacgagtgcgccagcagcccctgcctg
cacaacggcaactgcctcgacaagatcaacgagttccactgcgagtgccccactggcttc
aacgggcacctgtgccagttcgacatcgacgagtgcgccagcaccccctgcaagaacggt
gccaagtgcgtggatgggcccaacacctacagctgcgagtgcaccgaaggtttcacaggc
tctcactgcgagatcgacatcgatgagtgtgaccccgacccgtgccactacgggacctgc
aaggacggcatcgcctccttcacctgcctctgccagcccggctacaccggccaccgctgc
gacatcaacatcaacgagtgccagagccagccctgcaaaaacggagggacctgccaggac
aggaacaacgcctacaactgcctctgcctcaaagggaccacggggcccaactgtgagatc
aacctggacgactgcgccagcaacccctgcgactacggcaagtgcatcgacaagatcaac
agctatgagtgcacctgcgagccagggtacacagggcgcatgtgcaacatcaacatcgac
gagtgctccagcaacccctgccacaacgggggcacctgcaaggacggcatcaatggcttc
acctgcctctgccccgagggcttccacgaccccaagtgtctgtctgaagtgaacgagtgt
aacagcaacccctgcatccacgggaaatgccacgatgggctgaacggctacaggtgtgac
tgtgacccaggctggagtgggacaaactgtgacattaacaataacgagtgtgaatccaac
ccctgcatgaacggtggcacctgcaaggacatgaccagcggctacatctgcacctgcagg
gagggcttcagcggacccaactgccagaccaatatcaacgaatgcgcttccaacccctgc
ctgaaccagggcacgtgcatcgacgacgtcgccggctacacctgcaactgcctcctgccc
tacacaggagccacctgtgaggacgtgctggccccctgcgctggcggcccctgcaagaac
ggcggcgagtgccgggagtcggaagactatgagagcttctcctgcagttgcccctctggc
tggcaaggtcagacgtgcgagatcgacatcaacgagtgtgtgaaaagcccgtgccgcaac
ggggccacctgccagaacaccaacgggagctaccgctgcgcctgcaggaccggcttcacc
ggccgcaactgcgacactgacatcgacgactgcaagcccaatccgtgccacaacggtggc
tcctgctctgacagcgttggcacgttcttctgcgagtgcctggctggtttccgcgggccg
aagtgcgaggaggacatcaacgagtgcgccagcaacccctgcaagaacggtgccaactgc
accgactgcgtcaacagctacacctgcacctgcccctccggcttcagcggcatccactgc
gagaacaacacacctgactgcacagagagctcctgcttcaacggtggaacctgtgtggat
ggcatcaacaccttcacctgcctctgtccacccggcttcacgggcagctactgtgagcac
gacattaacgagtgcgactccaagccatgcctgaacgggggcacgtgtcaggacagctac
gggacgtacaagtgcacttgtccccagggatacacagggctcaactgccagaacctggtg
cgttggtgcgactcctctccctgcaaaaacggaggcaagtgctggcagaccaacaacctg
taccgctgcgagtgcaacagcgggtggacagggctctactgcgatgtccccagtgtctcc
tgcgaggtggctgccaagcagcaaggtatcgacgtagcacatctctgcagaaattcgggg
ctctgtgtggacaccggcaacactcacttctgccgctgccaggccggctacaccggcagc
tactgtgaggagcaggtggacgagtgttcccccaacccctgccagaacggagccacctgc
acagactacctgggaggctactcctgcgagtgtgtggctggttatcatggagttaactgc
tcagaggagatcaatgagtgcttgtcccacccatgccagaatggaggaacctgcattgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcccgtcaccctggggcccaagtgctttaac
aatggcaagtgcacggatcgggtgggcggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagacgtcaacgagtgcctgtccaacccctgcgacgcccgcggc
acccagaactgcgtgcagcgggtcaatgactacaaatgcgagtgccgacctggctacgcc
ggccggcgctgtgacaccgtggtggacggctgtaaaggcaaaccctgccggaacggtggg
acgtgcgcggttgccagcaacactggccgcggcttcatctgcaagtgccccccgggcttt
gtgggtgccacctgcgagaacgactcccgcacctgcgggaacctgcactgcctgaacggc
ggcacctgcatctccatccacaagagctccaagtgcatgtgtgctccggccttcacgggt
cccgagtgccagtacccggccagcagcccctgcacccccaacccctgctacaacaggggc
acctgcgagttctttggcgacgcctccccctactaccgctgcaactgccccgccaacttc
aacggcctcaactgccacatcctcgacttcgatttccaaggtgggatcgggcaggacatc
atcccacccaaaatcgaggagaagtgcgagatcgccgtctgcgcggggtacgccggcaac
aagatctgcgacgggaaatgcaacaaccacgcgtgcggctgggacgggggcgactgctcc
ctcaacttcaacgacccctggaagaactgctcccagtccctgcagtgctggaagtacttc
aacgacggcaagtgcgactcacagtgcaacaacgctggctgcctgtacgatggatttgac
tgccagaaatacgaagggcagtgcaaccctctgtatgaccagtactgcaaagatcacttc
tccgatggtcactgtgaccagggctgcaacaattttgagtgcgaatgggatggtctggac
tgcgcaaacaacatgccggagaagctggcggatggcacgctggtggtggtggtcctcatc
acccccgagaacctcaagaacaactccttcaacttcctgcgggagctgagccgcgtgctg
cacaccaatgtggtcttcaagaagaacgcgaagggagaatatatgatctttccatactac
ggcaatgaggaggagctgaaaaagcattacatcaagaggtcgacagaggactggtcagat
atgtctagtgctgtcatcaacaaagtgaagagcagcctctactccagggccggcaggagg
caaaagagagagctggatcagatggacatcagaggatccatcgtgtacttggaaatcgat
aaccgccagtgcatccagtcgtcttcccagtgcttccagagcgcgaccgatgtggcagcg
ttcctgggcgccttggcctcccttggcaacctgaacataccctataaaatagaagccgtt
aaaagtgaaacggccgagcccgcgaagaactcccagctgtatcctatgtacgtggtggtg
gccgcgctggtcttgctcgcgttcatcggagtgggggtgctggtgtctcgtaagcggcgc
agggagcatgggcagctttggttcccagaaggcttcaaagtgacggagtcgagcaagaag
aagcgacgagagccacttggggaggattctgtgggactgaaacccctcaaaaatgcttca
gatggcacgctaatggacgacaaccaaaatgagtggggcgatgaggagaccttggacacc
aagaagttcaggtttgaggagcaggcgatgctgcccgacacggacgaccagacggaccac
aggcagtggacccagcaacacctggacgccgctgacctgcgcatctcgtccatggcgccc
actccgccgcagggggagatcgatgccgactgtatggatgtcaacgtcagaggtcctgat
ggcttcacccccctcatgatcgcctcgtgcagcggaggagggctggagaccggcaatagc
gaagaggaagacgatgctcccgccgtcatctcggacttcatctaccaaggtgccagctta
cacaaccagacggaccgcaccggcgagacggccctgcacctggccgcacgctactcccgc
tcggacgctgccaagcgcctgctggaagccagcgccgacgccaacatccaggataacatg
ggcaggacacccctccacgccgctgtctctgccgatgcccaaggcgtcttccagatcctg
attaggaacagggcaactgaccttgacgcccgaatgcacgacgggaccactcctctgatc
ctggccgctcgcttggccgtggaggggatgctggacgatctcatcaactgccacgcagac
gttaacgccgtggatgatctaggcaagtcagcgctgcactgggcagctgctgtgaataac
gttgaagccgcagttgtcctcctgaagaacggcgccaataaggatatgcagaacaataag
gaggagaccccgctgttcctcgcagccagagaagggagctatgaaaccgccaaggtcctg
ctggaccattttgccaaccgcgacatcacggaccacatggaccgtctcccgcgggacatc
gcccaggagcgcatgcaccacgacatcgtgaggctgctggacgagtacaacctggtgcgg
agcccacccctgcacaacggcccactgggggcccccacgctgtccccaccgctctgctcg
cccaacagctacatcggcaacctgaaacctgccgtccagggcaagaaggccaggaagcca
agcaccaagggcctgagctgcaacggcaaggatgccaaagacctcaaagcccggaggaaa
aaatcacaagacggaaaaggatgtctgcttgacaactccagcgtgttgtctccagtggac
tcgctggaatcgccccatgggtacctgtcggatgttgcctcccctccgctgatgacctct
ccgttccagcagtccccttccatgcctctgaaccatctgccaggcatgcctgacgcccac
atgagcatcaaccacctcaacatggcagggaagcaggacatggccatgggaaactccagc
aggatggctttcgattcggtgccgccgcgtctctctcacctgcccgtctccagccccagc
acggccatgagcaacgccccgatgaatttctcggtgggcggcgcggccgctctgaacggg
cagtgcgagtggctcagcaggctgcagaacggcatcgtccagaaccagtacaaccccctg
cggggcaacatgcaacctggggcgcaccagcagacgcaaaaccttcagcatggcatgatg
accaccctgcacaacagcttgcccaccacaagcttgtcgcagatgatgagctaccaggcg
atgccgaacacccgcctggcttcccagcctcacctgatgcagagccagcagctccagcag
atgcagcagcagcagctccagcagccaaacctgcagccgcagcagccgccgcagccaccc
cagcagccgccgccgcagcagccgccaccgcagcatcacaaccccagctccaacgccagc
ggccacatcgcccaaaatttcctcggtacggagctgagccagcccgacatgcagccggtg
agcggcagctccatggccgtccacaccatcctgccgcaagattcccagatgctgcccacg
tctctgccgtcctccctcgcccagcccatgaccaccacccagttcctaactccaccttcc
cagcacagttattcctcccccttggacaacacccccagccaccagctccaggtgcccgac
caccctttcctcacaccgtctccggagtcgccggaccagtggtccagctcgtcccctcac
tccaacgtgtccgactggtccgagggcatctccagcccccccaccagtatgcagtcacag
ctgggacacatccccgaagccttcaagtaa
DBGET
integrated database retrieval system
