Caloenas nicobarica (Nicobar pigeon): 135996380
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Entry
135996380 CDS
T11056
Symbol
FUBP3
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
cnic
Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135996380 (FUBP3)
03041 Spliceosome [BR:
cnic03041
]
135996380 (FUBP3)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
135996380 (FUBP3)
Spliceosome [BR:
cnic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135996380 (FUBP3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_NusA_2nd
KH_KHD4_2nd
CG7065_mid
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
135996380
NCBI-ProteinID:
XP_065504341
LinkDB
All DBs
Position
19:7015886..7053765
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AA seq
563 aa
AA seq
DB search
MAELAQGQSAAPVGIKAEGFVDALHRVRQIAAKIGDIPHLNNSTTLVDPSVYGYGVQKRP
LDDGGLRVSGLHGAQIRDTERIGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISR
IQAESGCKIQIAPDSGGMPERPCVLTGMPESIEQAKRLLGQIVDRCRNGPGFHNDVDGNS
TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDAFKVQ
QAREMVLEIIREKDQADFRGVRNDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQND
AGVRIQFKPDDGISSERVAQVMGLPDRCQHAAHIISELILTAQERDGFGGLAVTRGRGRG
RGDWSVGTPGGMQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGV
RIFTIRGVPQQIELARHLIDEKVGGTSMGGPGGFGQNPFSQAPATPHQNGPQAFMTQGWG
STYQTWQQPGQQVPSQQSQQQNSHPDYSRAWEEYFKKQSHAASAASQASSQPDYTMAWAE
YYRQQAAYYGQTLGQAQAHSQEQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggcgcaggggcagagcgcagcgcccgtggggatcaaggccgagggcttc
gtcgacgctctgcaccgggtccggcagattgctgctaaaattggagatattcctcacttg
aataattctacaacactcgtggacccctcggtctatggttatggagtgcagaaacggccc
ctggatgatggaggtctccgcgtaagtgggctccatggagcacagataagagacacagag
agaataggtaaccagttaggggccctggtacatcaaagggctgtaataacagaagagttc
aaagtgcctgataaaatggttggatttatcatcggcaggggaggagaacagatctcacgg
attcaggcagagtctggctgcaaaattcaaattgctccagacagtggtgggatgcccgag
aggccctgtgtgctcaccgggatgccagagagcattgaacaagcaaaacggctactgggg
cagattgtagatcgctgtcggaacggacccggttttcacaacgatgttgatggcaacagt
acgattcaggagattttgatcccggcatccaaagtgggtctagtcatcggcaaaggaggt
gaaacaataaaacagttgcaggagcgaacaggtgtgaaaatgattatgatccaagatggt
ccattgcctactggagcagataaacctctccgtattactggagatgcatttaaagtacag
caagcgagggaaatggtactggagatcatccgagagaaagatcaggcagacttccgaggc
gtacgcaatgatttcagttctagaatgggaggaggcagcatagaggtctctgtgcccagg
tttgctgttggaattgtgataggaagaaatggagaaatgatcaaaaagattcagaatgat
gctggagttaggattcaatttaaaccagatgatgggattagttctgaaagagtcgcacag
gtcatggggcttcccgataggtgtcaacacgcagcgcacatcatcagcgagctcattctc
acagcacaggaacgagatggctttggaggtttggctgtcacccgaggaagaggtcgtggc
cgtggggactggagtgttggaacacccgggggcatgcaggaaataacctacacggtgcca
gccgataagtgcggcctcgttataggcaaaggtggcgagaacatcaagagcataaaccag
cagtcaggagcccacgtggagctccagagaaacccacctccgaacacagaccctggtgta
cgaatattcacaatcagaggagttccgcagcaaattgaactcgctagacatctcatagat
gagaaagttggtggtaccagcatgggtggacctggaggatttggtcagaatccattcagc
caagcacccgcgacacctcatcaaaacggtcctcaggcgttcatgacgcagggttggggc
agtacctaccagacgtggcagcagcctgggcagcaagtcccaagccaacagagccagcag
cagaacagccatcccgattacagcagagcatgggaggagtatttcaaaaaacagagtcat
gctgccagtgctgcttctcaggcaagttcccagccggactacacgatggcttgggcagag
tattacagacagcaggctgcctactacgggcagacactagggcaggctcaggcccacagc
caggagcagtag
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