Caloenas nicobarica (Nicobar pigeon): 135996415
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Entry
135996415 CDS
T11056
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04510
Focal adhesion
cnic04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135996415 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
135996415 (RAPGEF1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
135996415
NCBI-ProteinID:
XP_065504425
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Position
19:complement(7396899..7476671)
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AA seq
1227 aa
AA seq
DB search
MSGKIEKADSERSHLSSFTMKLKGKFHSPKIKRTPSKKGKQTDVTVKTPEKTANKNVSWL
EEKEKEVVSALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQQSSAISS
CYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQEHP
SPTSPVKPSLPACKSDSPSELPLTDREMEILNKTTNMTQSNELLTDSMDEEVAPPKPPLP
SIRVAENSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRR
LSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDQSDHYDPDY
EFLQQDLSNADQIPQQVPGILSPLPESLGESGSPFHGHTFQLPQGSSPPLEFCSLSGTAP
PTETPPALPEKKRRSAASQTSENSSCRVSYERHPSQYDNISEDDMQSAASVPSVPFTPFV
AVLPFQQGNSSAPVEFIADFAAPDSNSDPEKPPPLPEKKNKHMMAYMQFVEDYSEPQPSM
FYQTPQNEHIYQQKNKHLMEVYGFNDSFISLDPSQDLAPPPALPPKQRQLQASYAASSFS
PVSYCVQQTKVPFTLEDSGAAQGLTMSVSNSFLNRHSSFPVHSYKSVFRSYSQDFVPHNQ
VSVPPFLSSASSSCTTPPFPPVHPSQSPDLAVPAAASQSPSTADVPNSSSQESSFNGNAP
VCLPSETSLTDSLQTPSSENASEEAGEGEYVNLYSSGQSNGELPRSEGESPSVKDGHSKD
STSSSGAVGKEGQDGAERQQQSPDALESSQLEEEVDELSLIDHSEIMARLTLKQEGDDGP
DVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFCHFPDTF
KKRVSKNTFFVLVRVVDELCLVELTEEILKLLMDLVFRLVCNGELSLARVLRKNILDKVD
QKKILSYANSIKPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKE
QNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYL
AILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALADVEPPCIPYLGLILQ
DLTFVHLGNPDYIDNKVNFSKRWQQFNILDSMRCFQQVHYDIKRNDDIVSFFNDFSDHLA
EEALWELSLKIKPRNITRRKTDREEKT
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaagatcgagaaagcagattctgagcgttcccatctctcctcgttcactatg
aaactgaagggcaagtttcattcaccaaaaataaagagaaccccttcaaagaaaggaaag
caaactgacgtgacagtgaaaacaccagagaagacagcgaacaaaaatgtatcgtggcta
gaggagaaggagaaggaggtcgtcagtgcattgcgctactttaagactattgtggacaaa
atggcaattgataagaaagtattagagatgctgccgggctcagccagcaaagtgctggaa
gccatcctgcccttggtgcagaccgacccgcgcatccagcaaagttctgccatctcgtct
tgctacagccgtgtgtaccagagtctggccaatctcatccgctggtcggatcaagtgatg
ctggaaggtgtgaactcagaagacaaggagatggtgacaacagtgaagggtgtcataaaa
gctgttctggatggagtcaaggagctggtcagactcacaattgaaaagcaggagcatccc
tctcccacaagcccagttaaacccagtttaccagcatgtaaatctgacagcccatcagaa
cttccccttacagaccgagaaatggaaatcctcaacaaaacaactaacatgactcaatcc
aatgagctactgactgactccatggatgaagaagttgcgcctcctaaaccccctctgccc
agcattcgtgtggcagaaaacagccctccaccagcactgccccccaaaaaacggcaatcg
gcaccttccccgaccagagtggccgtggtggcccccatgagccgagccaccagcggctcc
agtttacccgttggcatcaacagacaggattttgatgttgactgctatgcccagagacgg
ctgtcgggtggaagccactcctacgggggggagtctcctcgcctctcaccctgcagcagc
atcggcaaactcagcaagtccgacgagcagctctcgtctctggaccgcgacagcgggcag
tgctcccgcaacacaagctgtgaaaccctggatcaatcagatcactatgacccggactat
gagttcctgcagcaggacctctccaatgctgatcagatacctcagcaggtgcctggtatc
ctcagcccgttgccagagtctttgggtgagtctggctcccctttccacggacacactttc
cagctcccgcagggcagctctcctccgctggaattctgcagcctctcgggaacggcgcca
ccaacagagactcctccggctttaccagagaagaagaggaggagcgcagcctctcagacc
tcggagaactccagctgcagggtgtcctacgagaggcatccttcccaatacgacaacatc
tcggaggatgacatgcagagcgcagcgtctgtcccgtcagtacctttcacgccgtttgtt
gctgttttgccgttccagcaaggaaactcttcagcaccagtcgaattcattgctgacttt
gctgctccagattctaacagtgacccagagaagccaccacctctgccagagaagaagaac
aaacacatgatggcatacatgcagtttgtggaagactactcagagccacagccatccatg
ttctaccagacccctcagaacgagcacatctaccagcagaagaacaagcacctcatggaa
gtctatgggttcaatgactcctttatcagcttagacccttctcaagatctggcacctcct
cctgctctcccaccgaagcagcggcagctgcaggcctcctatgctgcctcttctttctct
cctgtctcctactgtgtccagcaaactaaagtgcccttcaccctcgaggacagcggtgct
gctcagggcctcactatgtcagtctctaactcctttctcaaccggcacagctcctttcct
gtgcactcgtacaaatccgtgtttaggtcctactcccaggactttgtgcctcacaaccaa
gtctccgtacctcctttcctctcttctgcctcctcctcctgcaccaccccaccttttccg
cccgtccatccgtcccagagccccgacctggcggtgcccgccgcagccagccagtcaccc
agcactgcggacgtgccaaactcctcttctcaggagagcagctttaacgggaatgctcct
gtctgccttccttctgaaacctctctcactgattctctccagacaccttcgagtgaaaac
gccagtgaggaggctggtgagggtgaatacgtcaatctgtattcctctggccagagcaac
ggggaactccctcgctctgaaggagaatctccctctgtcaaagacggccactcgaaagac
tccacttcgagcagcggcgcagtggggaaggaaggccaggacggcgctgaaaggcagcag
cagtcaccagatgctttggaatcatcgcagttggaggaagaggtagatgagttatccctt
atcgaccacagtgaaattatggcaaggttaacgctgaagcaagagggagatgatgggcca
gatgttcgtggcggatccggagatattttgttggtgcatgcgacagagaccgacaggaaa
gatctggtgctgtactgtgaagcctttctgactacatacaggacatttattacccctgaa
gagctcatcaagaagctgcagtacaggtatgagaagttttgccacttcccagacacgttt
aagaagcgagtcagcaagaacaccttcttcgtgctggtgagggtggtggatgagctgtgc
ttagtggagctgacggaggaaattctcaagctgctgatggacctggtcttccgactggtc
tgcaacggggagctcagcctcgccagagtgttacgcaagaatatccttgataaagtggat
cagaagaaaatactgagctatgccaactccatcaaacctcttgcagcccgtggagtggca
gccagaccggggaccttgcatgatttccacagccacgaaatagccgagcagctgaccctc
ctggatgctgaactcttctataaaattgagatcccagaagttttgctttgggcaaaggag
caaaacgaggagaagagccccaacctgacacagttcacagagcactttaataatatgtcc
tactgggtccgttcaataattatgctacaagagaaagcgcaagacagagagaggcttctc
cttaaatttataaagattatgaagcacttacgaaagctgaataattttaattcctatctg
gccattctttctgcactggattctgcgcccatccgaaggctggagtggcagaaacaaacc
tcggagggcctggccgagtactgcacgctgatcgacagctcctcgtccttccgcgcctac
cgagcagctctggctgatgtggagcctccctgcataccttacctaggcctgattctacag
gacctgacctttgttcatctgggaaaccccgattacatcgacaacaaagtgaacttttcc
aagcgctggcagcagtttaacatcctggacagcatgaggtgcttccagcaagtacattac
gacatcaaaagaaacgacgacatcgtgtcgttcttcaacgatttcagtgaccacctggcc
gaggaggccttgtgggaactgtccctcaaaatcaaacctcggaacatcacgaggcggaaa
acagaccgagaagagaaaacctag
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