Caloenas nicobarica (Nicobar pigeon): 135996421
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Entry
135996421 CDS
T11056
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135996421 (GAPVD1)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135996421 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
135996421
NCBI-ProteinID:
XP_065504441
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All DBs
Position
19:11116341..11145987
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AA seq
1459 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPVQQEKLFGEKGT
EKFRQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSPVNLLEGLSRTVVYMTYSQLTALVGF
MRNVMSSDQLKEDRMALENLLASLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQVTPGMMSENEVLNMQL
ADGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAV
VRPKVHYARPSHPPPDPPILEGAMGGNEARLPNFGSHTLIPTDLEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPGWNRRPGNEERELPMPSAGAAVLAAASQSSSSSPSKDSSRGEIE
DRKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDMVPDRYPALQDDPSPR
VSAQAQAAEDILDKYRNAIKRTSPSEGAIANYDSAETLGDGESMHDSPRDEALQNMSADD
LPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIV
CFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTR
CRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAAD
DKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDIL
RDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILR
MCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESY
WWMQFTAAVEFIKTIDDRK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggacatacacacgctggcccatcacctcaagcaggagcggctctacgta
aactcagaaaagcaacttattcagaggctcaatgcagacgtcctgaagacagctgagaag
ctgtaccgcacagcatggatttccaagcagcaaaggattaacttggacagactgatcata
acaagtgctgaagcttctcctgctgagtgttgccagcatgctaaaatcttggaggataca
cagtttgtggatggatataagcagttgggatttcaggagacggcttacggagaattcctg
aacaggctgagagagaacccaaggcttattgcgtcctgcctggttgctggagagaagctc
aaccaggacaacactcagagtgtcattcacacagtctttacctccatttacggcaactgc
atcatgcaggaggatgagagctatctcctgcaggtcctccggtacttgattgaatttgaa
ctcaaggagagcgacaacccgaggcggctgctgagacgaggcacctgtgcattcagcatc
ttattcaaacttttctctgaaggactcttttctgcaaaactttttcttactgcaactttg
catgagcccatcatgcagctcctggttgaagatgaagaccacctggaaactgatccaaac
aagctaattgagagattctctccagtacagcaggaaaagttgtttggagagaaaggcaca
gaaaagttcaggcaaagagtgcaagagatggttgactccaacgaggccaagctggtgacc
ttggtgaacaagttcattgggtatctcaaacaaaacacgtactgttttcctcacagcttg
cgctggatcgtgtcacagatgtacaaaacgctctcgtgtgtcgacaggctggaggttggg
gaggtcagagccatgtgcacagatcttctcctcgcgtgtttcatctgtcctgcaatcgtt
aacccagaacagtacgggatcatttctgatgctcctataaatgaagtggcaagatttaat
ctgatgcaggttgggagactcctgcagcaactggcgatgacgggttctgaagagggagat
ccccgtacgaagagcaaccttgcgaagtttgacaagagctgtgtggctgctttcctggat
gtggttattgacggccgggcagtcgaaactcctccgatgtctcctgtgaacctgctggag
gggctgagcagaaccgtggtgtacatgacgtacagccagctcactgccctggttggcttt
atgcggaatgtaatgtcaagtgatcagcttaaggaagatcggatggctttggaaaacttg
ctggcaagcttaccccagaacaaaccagggaaaagcagcagccttgaaatgactccgtat
aataccccacaactttctcctgcaactactccagctaacaagaaaaatcgattaccgata
gcaacccgtagcagaagcagatcaaacattctaatggatcagcacggagatcacgaagga
tcctcccaggagaccatcccagaagttcagccagaagaagtgctggtgatttctctgggg
acaggtccgcaggttactcccggcatgatgtctgaaaatgaggtcttaaatatgcagctt
gcagatggtgggcaaggagatgtccctgttgatgaaaacaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttcg
aatcgctccaactctgtgtcctccctggatttagaaggagagtcggtgtcggagctcggc
gcgggcccctccggcagcaacggcgtggaagctctgcagctgctggagcacgaacaagcc
acaactcaggataatcttgatgacaagctccgtaagtttgaaatccgtgatatgatggga
ttgactgatgacagagacatatcagaaaccgtgagcgaaacttggagtacggatgtcttg
ggaagtgacttcgatccaaatattgatgaagatcgtttgcaagaaatagcaggtgcagct
gcagagaacatgctaggcagcttgctgtgtttaccaggttcaggatccgtgttgcttgat
ccctgcacaggttcaaccatatcagaaaccacaagcgaggcctggagtgtggaagtattg
ccaagtgactcagaggctccagacttaaaacaggaggaaaggctccaagaactggagagc
tgctctgggctgggcagcacgtctgacgacacagacgtgcgggaggtcagttctcggccc
agcacgccaggcctcagcgttgtatcaggtattagtgcaacatctgaagatattcctaat
aagattgaggatctcaggtccgaatgtagctctgactttgggggaaaagattctgtgaca
agtcctgacatggatgaaacagcccacggagccagtcagttgacatctcctccttctcag
acagattctttgcttgcactgtttgaccctctgtcatcaaatgagggtgtatcagctgta
gtaaggcctaaagtacactatgcaagaccctctcaccccccacctgatccacccatcttg
gaaggagctatgggaggtaacgaggcccgattaccaaactttgggtctcacactttaatt
ccaactgatttagaagcgttcaagcagaggcattcttatccagaaaggctggtccgcagc
aggagttcagatatagtgtcatcagttcggaggcccatgagtgaccctggctggaacaga
cgtcctggcaacgaggagagggagctcccgatgccgagcgccggagcagctgtcctggcg
gctgcgtctcagtcctcgtcttcctctcccagtaaagactcctctaggggagagattgaa
gatcgaaaagacagtgatgatgaaaagtctgacagaaacaagccctggtggaggaaacgt
tttgtgtctgccatgcccaaagctcctattccatttagaaagaaagaaaaacaagaaaaa
gacaaagatgacatggtgcctgacaggtacccagcgcttcaagatgatcccagcccaaga
gtcagtgcccaggcacaagctgcggaggacattctggacaaatacaggaatgcaattaaa
agaaccagtcctagtgaaggagctatagcgaactatgacagtgcagagactcttggggat
ggtgaaagtatgcatgactctccacgtgatgaggctttgcaaaacatgtctgcagatgat
cttccagactctgcaagtcaagtagcacagccacaaagttctgctttctcctatagggat
gcaaagaagaaattgagattggctctttgttcagcagattctgttgccttcccaatgctg
acacattcaacaaggaatggtctgccagatcacacagaccctgaagataatgaaattgtg
tgcttcttgaaagttcagctagctgaagctatcaacctccaagacaagaacctgatggcc
cagctgcaagagacaatgcgatgtgtaagccgctttgataacaggacctgtcgaaagctg
ctggcatctattgcggaggactataggaaaagagctccatatatcgcttatctaactcga
tgtcgccaaggcctgcaaacaacacaagcacacttggaaaggctgttgcaaagagttctg
cgagataaagaagtggccaacagatacttcactacagtatgtgtgaggttactgctagag
agcaaagaaaagaaaataagggagtttattcaagatttccagaaactcacagcagcagat
gataaaacagcccaagttgaggattttcttcagttcctctatggggctatggctcaggat
gccatatggcagaatgccagtgaagaacagcttcaggatgcacaattagctatagaacgc
agcgtgatgaatcggattttcaaacttgcattctaccctaatcaggatggagatattttg
cgtgaccaagtcctccatgagcacatacagaggttatctaaagtggtgactgcaaaccac
aaagcactgcagatacctgaggtatatctccgggaggcaccatggccatctgcacagtct
gaaatccgcacaataagcgcttataaaaccccccgagacaaagtacagtgtatcctgcga
atgtgttcaaccatcatgaacctgcttagtctggcaaatgaagattcagtacctggggca
gatgattttgttcctgttctggtctttgtcctcataaaggcaaatccaccttgcttgctg
tccactgttcagtacatcagtagtttctatgccaactgtttgtctggagaagaatcgtac
tggtggatgcagttcacggcagcagttgaattcattaaaactattgatgatcgcaagtag
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integrated database retrieval system
