Caloenas nicobarica (Nicobar pigeon): 135996430
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Entry
135996430 CDS
T11056
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135996430 (SEC16A)
Membrane trafficking [BR:
cnic04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
135996430 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
135996430
NCBI-ProteinID:
XP_065504480
LinkDB
All DBs
Position
19:9253629..9281626
Genome browser
AA seq
2470 aa
AA seq
DB search
MQQPPQPVPAGAAAPAPAGIARNMYWRNSSLGKRGNAPAAPVQPVTDPFAFGRQTPQGSP
LDNPSKGNALVMQSSSPAGFPQPAVLHASLSRAGDNPHGPHTSLSAPVSQPGINTSSFSN
VPITSPSPGYVINSTAEVHPNADFGLHGPAVPLHYNTGAAAENSFGVHPGMVSASNKPGV
RQDVSRDPNDVPSGPNATALFPPPLQQPVSQWRPVPGNLQSPVRNFVPHPELSSQTDVQN
VSQSSVSTSHLPPQTNLQQGPIHQGIPQNIMQAPLSVGCEKNGKNGSANSHHMNSIQPGN
MFRHNAEMTNAWLNQPYQEQFYPQPQLQDSSFVIPTAQENNPKNQSPDTSGMSNRPIPTD
RDSGTLSMFFKGDEAENEEILSSEKNYIVEKTEFDACQTNLASLYHPPMHPQRVATNVLS
QAQTGTGSANEMVQKGMDAQYFPKIVSQQETQAAKHSMFASDDKTRIGDTSEHGGSQYEN
VENLECIQNQEVLPSEPRNISAASPAAGPDLYRYGSFPGHALPKNAVVSHAEGGPNLEAP
DSLPHPVRPDSVSSNYSNISHRSASSSARPQEQVSTFIQQESGKPDEESSAVFFKQIDSS
PLGGDSSELNLGKNYHGNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEIDQA
KMVVELRENHSNQKNIKKNTAVPVASPGNLEQPPDNLETIFLPQVHPLPLAVTGEAGNIL
HSGPTMENLQSVSERRSSTRAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVP
AKQTVEVIQPPEEVPSNQQPSKPGTIPVQLSQDGNVSSENLENPPKMGEEEALQSQASSG
YASLLSSPPTESLQNQPILIAQPNQSYNLAQPINFSISLSNQLSSNENNQPMKDSGVGDK
PAMGPQTSNAGGIISGENMPLPMMQVGSLLVNALPNTSLLKHNLLQSPVNSSDTASNQPA
NLLMKTPLNLAPEGQKNVNMEGFVPEFASKPGSNSSVSPGTNLPSGSANPLVPPVNSVVQ
ANNSANHSNSKEAAAGALDFTVSRTLEKSSASNSVQVHNQSLPGGPVYPQQSAGGAGQVG
PEMHDNQHFYQQVTKDVQAVSDRAVQGALLSPPQMQAAQTQQPPSSGSSSVPLNYQAATG
TKVMQVSQQHENQVLNNHPQPVGSQEASSAQPTTRCDQTSPDKQLASGQPSGAPPSTAPS
TTSQSVTPSAQQDLQRPSLPQTPQEAFGPPQNPYYYYRHPYDAYQPPYPPPYPPADPRTA
AHLYYMDDSYGQYDPRYRHYDSGTAYVEPGSYRYAEPERPSSRASHCSDRPSSRQGYTED
YYTKSGWSDYYPGYYPNSYDYGDPSRWDHYPSAYDPRYRDPRGYDQRYWYDAEHNPYQKR
DGYPYGSRYDRYEDNWRYDPRFAGSFDDESEPHRDPYGDDFDRRSVHSEHSGHSLRSSRS
VHSHQSSFSSRSQQSQLYRSNHDLTANAYETTAQAVSLHTDYPYGGYPANFDGQQPFTDY
GYAAEPGWPAVEQAPLRPSTPEKFSVPHICARFGPGGFLIKVLPNLPSEGQPALVEIHSM
ETMLQHSPEQEEMRAFPGPLAKDDTHKVDVINFAQNKATQCFKNENLIDKESASLLWDFI
VLLCRQNGTVVGTDLAELLLRDHKTVWLPGKSPNEANLIDFTNEALEQVEEESGEAQLSF
LTDSLITTIDSLEKETERFRELLLYGRKKDALESAMKHGLWGHALLLASKMDSRTHARVM
TRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDLESRT
IATMGDTLASKGLLDAAHFCYLMAQVGFGVYTRKTTKLVLIGSNHSLPFFKFATNEAIQR
TEAYEYAQSLGTQPGCLPNFQVFKFIYACRLAEMGLAAQAFHYCEVISRTVLKDPHYYSP
VLIGQLIQMSSQLRLFDPQIKEKPEQESSIEPSWLVRLRHVDGQIKEGAIAYNADRSTPP
PYACSTPSSELDRASQCDGAGVGRDMGPGAENPLFASLLPNMAQQMQSVQLMPSVPQAVL
DGSAAMIPPGDQEPVQSVPFYSVASQSVGPGPGFAPPGFSAPYGIEPSPVYLGSALPPGG
SPQEVEPRAEEQTNLETGMQRIAPESPSQNSFPEQREEDFYGRMASMAPGRRSRSASQSS
AHMGYGRRSRTTSESSAHSVGRERSNSAANQPSPSPSVPAGKETKKETKKEPAPRKTGGN
WLRWLMGKGKNEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESKPPPPPPTGFPKVPQAVP
AGPGGPPSAPVNMFSRRAAGSRARYVDVLNPGGTKSSGAVPAPSDLFAPLAPMPIPANVF
VPNSVPGEPQPMEGSGAPEHTPAANQTNADPAAAVEPEYLNSAVLPPGSGLPISNPDGSQ
SGELSRSSSMSSLSREVSQHFNQAAAAPPSGGPAAGTVPFYNPSQFAQSPAVTGSSKLGR
IGQRKYPTLK
NT seq
7413 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctccacagcctgttccagcgggagctgcagctccagctcccgcaggcatc
gcccggaacatgtactggagaaacagctcactcggtaaacgaggaaatgcaccagctgcc
ccagtgcagcctgtgacagacccttttgcgtttggcagacaaactccacagggttcccct
ttagataatccatccaagggcaatgcgttggttatgcaaagctcttccccggcggggttt
ccgcagccagccgttttgcatgcttcactgtcgcgtgcaggggacaatcctcatggaccg
catacatctttatcagctcctgtatctcaaccaggaataaataccagttcgttttctaat
gttccaattacttcaccgtccccaggatatgttataaatagtactgcagaagtgcatcca
aatgcagattttggactccatgggcctgcggtaccattgcattataatacaggagcagca
gctgaaaattctttcggtgtgcatcctggaatggtgtctgcatcaaacaaacctggagtc
agacaagatgttagcagagacccaaatgatgttccttcaggacccaatgcaacagcactc
ttccctccacctcttcagcagcctgtatctcagtggaggcctgttccaggtaacctgcag
tctccggttcgaaattttgtgccccatcctgagctgtcttctcagactgacgttcagaac
gtttctcagtcttctgttagcacttctcatcttcctccacagacaaatttacagcagggc
cctatacaccaaggtattccacaaaatatcatgcaagcacctttatccgttggttgtgaa
aagaatgggaaaaatggctctgcaaatagtcatcacatgaacagcatccagcctggaaat
atgtttaggcataatgcagaaatgactaacgcttggttaaatcaaccataccaggaacag
ttttatccacagccacaattgcaagactccagttttgtcattcccacagctcaggaaaat
aaccctaaaaaccagtctccagatacgtctggaatgtcaaatagacctattcccacagat
cgagattcaggaactctctccatgtttttcaaaggggatgaggcagaaaatgaagaaata
ctttcatctgaaaaaaattacatagttgagaaaacagagtttgatgcttgtcagacaaat
ttggcatctttgtatcacccaccaatgcatcctcagcgggttgcaactaatgttctctct
caggcgcagactggtacaggttcagccaatgagatggtacaaaaaggcatggatgcccag
tactttcctaaaattgtaagtcagcaggaaacacaggctgctaagcactctatgtttgct
agcgacgacaagacacgtataggtgacacgtctgaacatggtgggtcacagtatgaaaac
gttgagaacctggagtgcattcagaatcaagaagtgctgccaagtgaaccccgcaacatc
agtgctgcatccccggctgcgggccctgatctgtacagatacggatcctttccaggtcac
gcgcttcccaagaacgctgtcgtgagccatgctgaaggaggaccaaatttggaggcacct
gattcattacctcaccctgtccgaccagacagtgtatcttcaaactacagcaacatcagt
cataggagcgcttctagctccgcaaggcctcaagagcaagtcagtacgtttattcagcaa
gaaagtgggaagcccgatgaagaatcttctgccgtctttttcaaacagattgactcctct
cccttgggaggtgattcaagtgagctaaacctgggcaagaactaccacggtaatctatcc
cagcctccaactccgagtcctcctaagcctacaggagtatttcagacaagtgcaaatagt
tcttttgaacctgtgaggtcccatggagttggtatcaaacctgcagagattgaccaagcg
aagatggtggttgaattaagagagaaccactcaaaccaaaagaatatcaagaagaataca
gctgtgccagttgcatccccaggcaatcttgaacagccaccagataatctggaaactatt
ttcctgcctcaggtacacccactgccccttgcagtcactggggaagctggaaatatcttg
cactctggacctactatggaaaacttacaatcagtatctgagagaaggtcctcaacaaga
gctcagggggcagttaagaagtgtgatagcccagcgacaactttgtgggctcataatgag
ttacctaattttgggggaaatgttcttctggctcctgctgctcctgcagtgtacgtacct
gccaaacaaacggtggaagtcattcaaccaccagaagaagtcccatctaatcagcagcca
agtaaaccagggactattcctgtgcagctttcccaagatggaaatgtatcctctgaaaat
cttgagaatcctcccaaaatgggagaagaggaggcacttcagtctcaggcaagttccggt
tatgcaagtttgttgtcttctccacctacagagtctttgcaaaatcagcctatcctgatt
gctcagcctaatcagagctataacttggctcagccaattaatttttctatttctctatct
aatcagctaagcagcaatgaaaacaatcagccaatgaaggactctggggttggggacaag
cctgcaatgggtccccaaacatcaaatgctggtgggatcatttctggggaaaacatgcca
ttacctatgatgcaagttggatctctattagttaatgcacttccaaatactagtctattg
aaacataatttattacaaagccctgttaattcctctgatactgcttctaatcagcctgca
aacttgcttatgaaaactccacttaatttggctccagaagggcaaaagaatgttaatatg
gaaggttttgttcctgaatttgctagcaagccagggtctaactcatctgtttctcctggg
acgaatctccccagtggaagtgcaaatccactagtgccccctgttaactctgtagtacag
gctaataattctgcaaatcattcaaatagcaaagaagcagctgctggagcgctcgacttc
acagtatcacggacgttggagaaaagcagtgcaagtaattctgtacaggtgcataatcag
tcacttcctggtggtccagtatatcctcaacagtcagctggtggtgctggtcaggtgggt
cctgagatgcatgacaaccaacatttctatcaacaggtgacaaaagatgtgcaggctgta
tcagacagagctgtacagggagcgttgctgtctccaccacaaatgcaagcagctcaaacg
cagcagccaccatcttctgggtcatcctcagttcctttgaactaccaggctgccacaggg
actaaagtcatgcaggtgtcgcagcagcacgagaaccaggtgctcaataaccatccgcaa
ccagtgggttcccaagaagcgagttcagcgcagccgacaacaaggtgcgatcagacaagt
cctgataagcagttggcgtctgggcagccatcgggtgctccaccctccacagccccatct
accaccagtcagtcggtcacgccaagtgcgcagcaagacctgcagcgtccatccctgcct
caaactcctcaggaggcctttggtccaccccagaacccttactactactacagacatcct
tacgatgcttaccagcctccgtatccgccaccttatcctcctgcagaccccagaacagca
gctcatctttattacatggatgacagctatgggcagtacgacccacggtaccgacactat
gacagcggcacagcgtacgtggagcctgggagctaccgctatgctgagccggaacgtccc
agttccagagccagtcactgctccgaccggccttcttctaggcaagggtatactgaagat
tattatacaaaaagtggatggagtgactattatccaggttattacccaaactcatatgat
tatggagatccaagtcgctgggaccactacccatcagcgtacgaccccagatacagagac
cctagaggttatgaccagaggtattggtatgatgctgaacataacccttaccagaagaga
gatggatatccatatggtagcaggtatgaccgatatgaagataactggagatacgatcct
cgctttgctggaagttttgatgatgaatctgaacctcatagagatccttatggtgatgac
ttcgataggcgcagtgtgcacagtgagcattctgggcacagtctccggagctcccgcagc
gttcacagtcaccagagcagtttcagctctcgctctcagcaaagccagctgtatagaagt
aatcacgatctaacggctaatgcctatgaaactacggcgcaggcagtgtcgctccacaca
gattatccgtatggcggataccctgctaactttgatggacagcagccctttacagattat
ggctacgcggctgaaccaggatggccggcggtagaacaagcacctttaaggccctcaacg
cctgagaaattttcagtgcctcatatctgtgccaggtttggccctgggggcttcttaata
aaagtgctgccaaacctgccttcggaaggacagccagctctggtggaaatacacagcatg
gagactatgttacaacattctccagagcaagaagagatgagagcatttcctggtcctctt
gctaaggatgacacccataaagtggatgttattaattttgcacaaaataaagctacacag
tgctttaaaaacgaaaatttaattgacaaagaatctgcaagtctgctttgggactttatt
gtactgttgtgcaggcagaatgggaccgttgtgggaacagacctggctgaacttttgctt
cgagatcataaaacagtgtggcttcctgggaagtcccctaatgaggcaaatttgatcgat
ttcactaatgaggctttggaacaagtggaagaagaatctggtgaagcccagctctcattt
ctcactgatagtctcataaccacaattgacagtcttgagaaagagacggagagattcaga
gagttgctgctttacggccgcaagaaggatgctttggagtctgccatgaagcatggtttg
tggggccatgctctgctacttgccagcaaaatggacagcagaacacatgcgagagttatg
accagatttgccaacagtctcccaattaatgaccctctgcagactgtgtaccagctcatg
tcgggaaggatgccggctgcgtccacgtgctgtggagatgagaaatggggagactggagg
cctcatctagcaatggtgttatccaacttgaccaataacgtggacttggaatccaggacc
attgctaccatgggagacactcttgcttctaaaggcctgctggatgctgctcatttttgt
taccttatggcccaagttggttttggagtttacacaaggaagacaacaaagcttgtccta
attggatcaaatcatagcttgccattttttaagtttgccaccaatgaagccattcaaaga
acagaagcctacgaatatgcgcagtcactaggaactcagcctggctgcttgcccaatttc
caggttttcaaattcatctatgcttgccgactggctgaaatgggacttgctgctcaggct
ttccattattgtgaagtaatttccagaactgtcctcaaagatccgcattactactcacct
gtacttatcggccagctaatccagatgtcttcacaactacggctgttcgacccacagata
aaagaaaagccagagcaggaatcttccatagaaccttcatggttagtaaggcttcgacat
gtggatggacagatcaaggagggtgcaatagcttataacgcagacagatccaccccccca
ccgtacgcctgtagtactccaagctctgaattagaccgtgccagccagtgcgatggagca
ggagtgggccgggacatgggtccaggtgctgaaaatcccctgtttgcgtccttattaccc
aacatggctcaacagatgcaaagtgtacagctgatgccttcagtacctcaggctgtcctt
gatgggtcagctgcgatgattcctcctggtgaccaggaacctgtccaaagtgtccctttc
tattcagtggcttctcagtctgttggtccgggacctggctttgcacctccaggattttca
gctccgtacggaattgaaccatcaccagtgtatttagggtcagcgctaccaccgggaggg
tcaccacaagaagttgaaccgcgggcagaagagcagacaaacctggaaacaggaatgcag
agaattgccccggagtctccttcacaaaactctttccctgaacagagagaggaggatttc
tatggcagaatggccagcatggcaccaggacgaagatccagatctgcatctcagtcttca
gcacatatgggctacggacggagatcccgaacgacgtcagagtcctctgctcattctgtg
ggacgagagagatccaactctgcagcaaaccagccctctccttctccctctgttcctgca
gggaaagagactaaaaaagaaactaaaaaggagccagcaccaagaaagactggtggaaac
tggcttcgctggctgatgggaaaaggaaagaatgaagctcaccttccagatgacaagaac
aaatcaattgtttgggatgaacagaaacaacgctgggttaatctggatgaaccagaagag
gagagtaaacctcccccgccacctccaacaggatttcctaaagttcctcaggctgttcca
gctggacctggaggcccacccagcgcccctgttaacatgttctccagaagagcagccgga
agcagagcccggtatgttgatgtcctgaatccaggtggaaccaagtcaagtggtgccgtc
cctgcgccatcagacctttttgcgcccttggcaccaatgccaattcctgcaaatgtgttt
gttccaaactcagttccaggagaaccgcagccaatggaaggcagtggtgcgccagaacac
acaccagctgcaaatcaaaccaacgcagatcctgctgcagctgtggaaccagagtattta
aactctgcagtccttcctcctgggtctggacttcccatctcgaaccctgatggctcgcag
tcaggcgagctttcgcgctctagttcaatgagttcattatcacgtgaagtaagccagcat
tttaatcaggctgctgctgcaccgccctcggggggacctgcagcaggaacggtaccgttc
tacaacccctctcaatttgcacaatctcctgcagtcactggaagttcaaagctgggaaga
attggacagaggaagtatccgacattgaagtag
DBGET
integrated database retrieval system
