Caloenas nicobarica (Nicobar pigeon): 135996464
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Entry
135996464 CDS
T11056
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04020
Calcium signaling pathway
cnic04080
Neuroactive ligand-receptor interaction
cnic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
135996464 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135996464 (GRIN1)
04082 Neuroactive ligand signaling
135996464 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnic04040
]
135996464 (GRIN1)
Ion channels [BR:
cnic04040
]
Ligand-gated channels
Glutamate (ionotropic)
135996464 (GRIN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
Rap-GAP_dimer
DUF6724
Motif
Other DBs
NCBI-GeneID:
135996464
NCBI-ProteinID:
XP_065504562
LinkDB
All DBs
Position
19:complement(1484963..1522419)
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AA seq
965 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEEKESKAEKVLQFDPGTKNVTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNM
TGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESAHISDAVAVVAQAVHDLFEKEN
ITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRK
LVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTC
REEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADG
KFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILV
KKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALT
LSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEE
RITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVR
DNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHEN
GFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKD
ARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPC
RMVPQECQRDRLAPWSQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQ
LLQLE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctgctcttctcctcctctttcgcccgagcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctccagctc
aacgccacctcggtcacgcacaagcccaacgccatccagatggccctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtcccaccatactctcaccaggccaacgtctggtttgaaatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagtgacgaccatgaaggtcgtgctgcacaaaagaagctg
gagaccctcctggaggagaaagagtccaaggctgagaaagtgcttcagtttgaccctgga
accaaaaatgtgacgtcactgctgctggaggccaaggagctggaggctcgtgtcatcatc
ctttcggccagtgaggatgatgcggccacggtgtacagatcagcggccatgctcaatatg
acgggctccggctacgtgtggctggtgggggaacgggagatatcgggcaatgccctgcgt
tatgcccctgatggagtgattggtttgcagctcatcaatgggaagaatgagtcagcccac
atcagtgacgctgtcgcggtggtggcccaggccgttcatgacttgtttgagaaggagaat
atcacagacccgccacggggctgcgtgggcaataccaacatctggaagacaggacccctt
ttcaagagggtgctgatgtcctccaagtactcagagggtgtcactggacgggtggagttc
aatgaggacggggacaggaagtttgccaactacagcatcatgaacctgcagaatcggaaa
ctggtccaggttgggatttacaacggcagccatgtcttgaccaatgaccggaagattatc
tggccagggggagaaactgagaaacctcaaggctatcagatgtcgaccaagttgaagatt
gtgaccatccaccaagagccctttgtgtatgtgaagcccacacaagcagatgggacgtgc
agggaggaattcaccatcaatggagaccctgtgaaaaaagtcttttgcactggacccaac
gagaccatcccaggccgccccaccgtggcactgtgctgctacggcttctgcatcgacctg
ctcatccgactggcaggggtgatgaacttcacctatgaggttcacctggtggctgatggt
aaatttggtacccaagagcgggttaacaacagcaacaagaaagagtggaatgggatgatg
ggggagttgctgagcggccaagcggacatgattgtggctcctctcaccatcaacaacgag
cgggcacagtacattgagttctccaagcccttcaagtaccagggcctcaccatccttgta
aagaaggaaatcccccgcagcaccctggactcattcatgcagcctttccagagcacgctg
tggctgctggtggggctgtctgtgcacgtggtggcagtgatgttgtacctcttagaccgt
ttcagcccgtttggccggttcaaagtgaacagtgaggaggaggaggaagatgccctgacc
ctctcctcagccatgtggttctcctggggagtcctgctgaactctggcatcggagaaggt
gctccccggagtttctctgcccgtattcttggcatggtgtgggctggcttcgctatgatc
attgtggcttcatacactgccaacctggcagccttcctggtgttagaccggcctgaggag
agaattacgggcatcaacgacccccggctgcgcaacccttctgataagttcatctatgcc
acggtgaagcagagctcggtggacatctacttccgacggcaggtggagctgagcaccatg
taccggcacatggagaagcacaactacgagagcgctgccgaagccatccaggcagtgagg
gacaacaagctccacgccttcatctgggactcagcggtgctggagttcgaggcctctcag
aagtgtgacctggtgacgacaggggagcttttcttccgctctggcttcgggatcgggatg
cgcaaggacagcccatggaagcagaacgtctccctggccatcctcaagtcccacgagaac
ggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgtagc
aatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggctgga
ggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataaggac
gcgcggaggaagcagatgcagctggcgtttgcagccgttaatgtgtggaggaaaaacctg
caggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccacttttaggtcc
atcacctccaccctggcctccagcttcaagagacgtaggtcctccaaggatacgccctgc
agaatggtccctcaggagtgccagagagacaggctggcaccatggagccaagacagccct
gggaagctaccaccccactctgaacgtcctagcgcccaccatcacccgagctgcacagcc
tctccgcggcacatcatccccaccgccccaggaggagatgcatgtgttccccataggcag
ctcctgcaactcgaatag
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