Caloenas nicobarica (Nicobar pigeon): 135996519
Help
Entry
135996519 CDS
T11056
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135996519 (TTF1)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
135996519 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
WbqC
Motif
Other DBs
NCBI-GeneID:
135996519
NCBI-ProteinID:
XP_065504656
LinkDB
All DBs
Position
19:complement(7696138..7706323)
Genome browser
AA seq
1132 aa
AA seq
DB search
MTEEASADDIQVQDFLKKKKKKKKIHKEHNEKHENYERESVQNEELSCTSPVLLEDRAAQ
SGEGCKKKKKHKNKGEEQHPSLGNSCVELEHDISDETGVDTSQKKKKKKKHKCHDSTDQQ
SDITCVTVNQHLIDCCQEINADYVYEKQSAKKKRKEKSPEGDEVYERSTSETCDKNDNER
SKKKKKKKKRERNTEDMQEDTAVTIDQSLLSPKKKKKRKDKDLPLPAEEVDVAAPQHCHG
DGDCDSSPAVCEDSPDVPANFSKLSKAADQSHQKTSVCTKKEDTAVTVDQSLLSTPKKKK
KRKKKDRVLLLSTEEVDVATPQQCHEDGDCDAFPAIHEDSPDVPANFSKLTKAADQSHRK
TSVCTKKEDTALTIDQSLLSSPKKKKKRKKKDRVLLLSTEEVDVATPQQCHEDGDCDAFP
AIHEDSPDVPANFSKLTKAADRSHRKTPQEDTDVSIEQSLLSTPKKKREKKGRVLSLPTE
EFVVAAPQQCHEDDDCDASLVREDSLDVPANFSKLTKAADQSHRKTSQEDTAVSIEQSLL
STPKKKKKRKDKVLPLPAEVVDVATPQQCHGDCDSSPPVCEDSPDVPANFSKLNKAADRS
HRKTLEDTAATVGQSLLSPKQKKKKKDRVLALPTEEVGVAAPQQCHEDGDCDSSPAVQED
SPDVPANFSKPNKAARRSHRKTPARTKKVVKSRAFVMEESSSESDEMTTELLASNRKKDR
NSSFTETVTSEELGPNDKEHVGSRTRSAMDLEAAKQELEEFIPHVRSIAECSIRKMAGKD
LARFKQFKEQGIAVRFGKFSQKENDQIRKNIEEFLSITGIDSAEKLLFTSRYPEEQKNIN
YLKAKHHFCDKLSEGIPRPWRLVYYRAKKIFDPNNYKGRYTKAEKEELKKYHALHGNDWK
KISEMMSRSSLSVAMKYSQIKSAVNYGRWSKEEIRKLMHAVEEVIRKRVGMEDANSRSSS
EKSGTDHLIDQETLYQKLPWTEIETKVGTRHWRQCKQKWMIILTNKMTKGQPSYRGTKAI
QAKISLIKRLHEMQVEDYSEVKWEELTDIIGNVPAGYIQSKFYRLKVTSVPFWQKKTFSE
IIDYLYEKKLPELEEMLESRKGKPNSSDNSTATNQKKAFRLREIFDSGEDSD
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaagcaagtgcagatgatattcaagtccaggattttctcaagaagaagaag
aaaaagaagaaaatacacaaagagcacaatgagaaacatgaaaattatgaaagagaaagt
gtacaaaatgaggagcttagctgtacttctccagtgctgcttgaagatcgagcagcacag
agtggggaaggctgtaaaaagaagaaaaaacacaaaaacaagggagaggagcaacaccct
tcattaggtaattcttgtgtagaactggaacatgacattagtgatgaaactggagtggat
acttcccaaaagaaaaagaaaaaaaagaagcataagtgtcatgatagtacagatcagcaa
agtgatataacttgtgtcacagtaaatcagcatcttattgattgttgtcaggagatcaat
gctgattatgtttatgaaaagcaatctgctaagaagaaaagaaaagaaaaatcgcccgaa
ggagatgaagtatatgagcggtctacctcagaaacatgcgataaaaatgacaatgaaaga
tcaaaaaagaagaagaaaaagaagaaaagagagagaaatactgaagatatgcaggaagac
acagctgtaaccattgaccagtcactgttatctccaaagaaaaagaagaaaaggaaagac
aaagacttgccattacctgcagaagaggttgacgtggcagcgccccagcattgccatgga
gatggtgactgtgattcttctcctgccgtgtgtgaagattctccggatgtacctgctaat
ttttctaagctgagtaaagcagctgatcaatctcatcaaaaaacttcagtgtgtactaaa
aaggaagacacagctgtcactgttgaccagtcactgttgtcaactccaaagaaaaagaag
aaaaggaaaaagaaagacagagtcttgctgttatctacagaagaggttgatgtagcaacg
ccccagcaatgccatgaagacggtgactgtgatgcttttcctgccatacatgaagattct
ccggatgtacctgctaatttttctaagctgactaaagcagctgatcaatctcatcgaaaa
acttcagtgtgtactaaaaaggaagacacagctttaaccattgaccagtcactgttgtca
tctccaaagaaaaagaagaaaaggaaaaagaaagacagagtcttgctgttatctacagaa
gaggttgatgtggcaacaccccagcaatgccatgaagacggtgactgtgatgcttttcct
gccatacatgaagattctccggatgtacctgctaatttttctaagctgactaaagcagct
gatcgatctcatagaaaaactccgcaggaagacacagatgtatccattgaacagtccctg
ctgtcaactccaaagaaaaagagggaaaagaaaggcagagtcttgtcattacctacagaa
gagtttgttgtggcagcgccccagcaatgccatgaggatgatgactgtgatgcttctctc
gtgcgtgaagattcgttggatgtacctgctaatttttctaagctgactaaagcggctgat
caatctcatcgaaaaacttcacaggaagacacagctgtatccattgaacagtcactgttg
tcaactccaaagaaaaagaagaaaaggaaagacaaagtcttgccgttacctgcggaagtg
gttgatgtggcaacgccccagcagtgccatggtgactgtgattcttctcctcctgtgtgc
gaagattctccggatgtacctgctaatttttctaagctgaataaagcagctgatcgatct
catcgaaaaactttggaagacacagctgcaactgttggccagtcactgttatctccaaag
caaaagaaaaaaaagaaagacagagtcttggcattacctacagaagaggttggcgtggcc
gcgccccagcagtgccatgaagatggtgactgtgattcttctcctgctgtgcaggaagat
tctccggatgtacctgctaatttttctaagccgaataaagcagctcgtcgatctcaccga
aaaactccagcgcgtactaaaaaggtagtaaaaagcagagcttttgtcatggaagaaagc
tcttcagaatctgatgaaatgacaacagaactcttagcatcaaataggaagaaggaccgg
aatagttcctttactgaaacagtaacctctgaagaacttggtccgaatgataaagagcat
gtgggctcgaggacacgttcagccatggatttggaggctgcgaaacaagaattggaagag
tttattcctcacgtgaggagtatagcagagtgttcaatcaggaagatggctggaaaagac
ttagcgaggtttaaacagttcaaagaacaaggtattgctgtcaggtttggcaaattttcc
cagaaggaaaacgatcagatccggaaaaatattgaagagttcttatcgattactggaata
gacagtgctgaaaaactcctgtttacctcgaggtatccagaagaacaaaaaaatatcaat
tatctaaaagcaaaacatcatttttgtgataaactttctgagggcataccacgaccctgg
aggttggtatattatcgagcaaagaagatatttgacccaaataattataaagggaggtac
actaaggcagaaaaagaagaattaaagaagtatcatgctctgcatggcaatgactggaag
aagatttctgagatgatgtctcgttctagcctctcagttgctatgaaatactctcaaatc
aaatcggctgttaattatggtcgttggtcaaaggaagagatccggaagttaatgcatgca
gtggaggaggtgattaggaaaagagtgggaatggaagatgcaaattctcgttcatcatcg
gaaaagtcgggtacagatcacttgattgaccaagagacgctgtaccagaaattaccatgg
actgagattgaaactaaagtgggaactcgacattggagacaatgtaaacagaaatggatg
ataattttaacaaacaagatgaccaaaggacagccgtcatatagggggaccaaagcaata
caggccaagatcagtcttattaaaaggttgcatgaaatgcaagtggaggattatagcgaa
gtaaagtgggaagaactcactgatattattggaaatgtccctgcaggctacattcaatca
aaattttataggctaaaagtgacctctgtccctttttggcaaaagaaaaccttttctgaa
attattgattatctttatgaaaagaaacttccagaacttgaagaaatgttagaaagcagg
aaggggaaacccaatagttctgacaattcaacagccaccaaccagaaaaaggctttccga
ctcagggagatttttgactccggtgaagacagtgactaa
DBGET
integrated database retrieval system
