Caloenas nicobarica (Nicobar pigeon): 135996603
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Entry
135996603 CDS
T11056
Name
(RefSeq) POU domain, class 5, transcription factor 3
KO
K09367
POU domain transcription factor, class 5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135996603
03021 Transcription machinery [BR:
cnic03021
]
135996603
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
135996603
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
135996603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
135996603
NCBI-ProteinID:
XP_065504792
LinkDB
All DBs
Position
19:complement(809687..813868)
Genome browser
AA seq
383 aa
AA seq
DB search
MFSPDGGLPAAPFGLLPDAGPPFPRSGFDGAAAQPLFFPFAAEPEGARDPPPARAWLPPP
AGPPAKAEARPGRPCRQPSPEPRAAGCCGPAWPAPPWAGPAAPNAANAALPGPPFPGPAA
AFPGPQLCPAALQPGSGGLSGLGSSGSSSGAASEGGHSSDSGDEEAPTSEELEQFAKDLK
HKRIMLGFTQADVGLALGTLYGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAENT
DNMQEMCNAEQVLAQARKRKRRTSIETNVKGTLESFFRKCVKPSPQEISQIAEDLNLDKD
VVRVWFCNRRQKGKRLLLPFGNEAEGVMYDMNQPLVPPGLPIPVTSQGYSLAPSPPVYMP
PFHKAEMFPQALQPGLSMSNSSH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcccggacggggggctgccggccgcccccttcggcctcctgcccgacgccggg
ccgcccttcccccgcagcggcttcgacggggcggccgcccagccgctcttcttcccgttc
gccgccgagcccgagggcgcccgcgacccgccgccggcccgcgcctggctgcccccgccc
gccgggccgcccgccaaggcggaggcgcgcccgggccggccctgccgccagccctcgccc
gagccccgcgccgcgggctgctgcggcccggcctggcccgccccgccctgggccgggccc
gcggcccccaacgccgccaatgccgccctgcccggcccacccttccccggtcccgccgcc
gccttccccggcccccagctctgccccgctgccctacagccgggctccggcgggctctcc
gggctgggcagcagcggcagctccagcggtgccgccagcgagggcggccactccagcgac
agcggcgacgaggaagcgccaacctcggaagagctggagcagtttgccaaggacctcaag
cacaagcgcatcatgctgggcttcacccaggctgacgtggggctggctctgggcactctc
tatgggaagatgttcagccagacgaccatctgccgcttcgaagcgctccagctcagcttc
aagaacatgtgcaagctgaagccgctgctgcagcgttggctcaatgaggcggagaacacg
gacaacatgcaagagatgtgcaatgcagagcaagtgttggcccaagcccggaagagaaaa
cgcaggaccagcatcgagaccaacgtgaaggggacgctggagagcttcttccgcaagtgc
gtgaagcccagtccccaggagatctcccagatcgccgaggacctcaacctggacaaagac
gtggtccgggtctggttttgcaaccggcgtcagaaaggcaaacggctgctgctgcccttt
ggcaacgaggcggagggggtgatgtatgacatgaaccagcccctagtgccccccggtctg
cccatcccggtgacgtcccagggctacagcctggctccctcccctcctgtctacatgccg
cccttccacaaagctgagatgttccctcaagcgctgcagcctgggctctccatgagcaac
agcagccactga
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