Caloenas nicobarica (Nicobar pigeon): 135996769
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Entry
135996769 CDS
T11056
Symbol
MTA1
Name
(RefSeq) metastasis-associated protein MTA1 isoform X1
KO
K11660
metastasis-associated protein MTA
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135996769 (MTA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135996769 (MTA1)
03036 Chromosome and associated proteins [BR:
cnic03036
]
135996769 (MTA1)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
135996769 (MTA1)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
135996769 (MTA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
135996769
NCBI-ProteinID:
XP_065505059
LinkDB
All DBs
Position
20:7572490..7653085
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AA seq
698 aa
AA seq
DB search
MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTANGNVEAKVVCFYRRRDISSTLIVLAD
KHAREMEEEMENPEMVDLPEKQKHQLRHRELFLSRQLESLPATHIRGKCSVTLLNETESL
KSYLEREDFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDLLKEGEDDGRDQSKLETK
VWEAFNPLVDKQIDQFLVVARSVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDT
LHKNVYDISKAISALVPQGGPVLCRDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPW
KSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYNKPNPNQINVNNVKPGVV
NGTGVQAQNTAAGRACESCYTTQSYQWYSWGPPNMQCRLCASCWTYWKKYGGLKMPTRLD
GERPGPNRNNLSPHGVPVRNSGSPKFAMKTRQAFYLHTTKLTRIARRLCRDILRPWHAAR
HPYLPINSAAIKAECTARLPEASENPLLLKQVVRKPLEAVLRYLESHPCPPKPDPAKSLS
SSLNNLTPAKFTPVINNGSPTILGKRSYEQHNGMDGNMKKRLLMPSRGTYLGLPNHGQTR
QMGPSRNLLLNGKSYPTKVRLIRGGSMPPVKRRRMNWIDAPDDVFYMATEETRKIRKLLS
SSEAKRAARRPYKPIILRPIQAVQLRQPMNDEPIIIED
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaacatgtaccgggtcggagattatgtctacttcgaaaattcttcaagtaac
ccatatttgatacgaagaatagaagagcttaataagactgccaatggaaatgtggaagca
aaggtggtttgtttctacaggagaagagacatatcaagtacacttattgtactggcagac
aaacatgcaagagaaatggaagaagagatggaaaatccagaaatggttgatttaccagag
aaacagaagcatcagctacgccatcgtgagttgtttctctcacgacagctggaatctctg
ccagccacacacattagaggcaaatgcagcgttactctgttaaatgagacagaatcgctt
aaatcatatctggaacgggaggatttcttcttttattcactagtatatgatcctcaacaa
aagaccctactcgctgataaaggagagattcgagttggaaacagataccaggcagatata
acagacttactaaaagagggtgaggatgatggaagagatcagtcaaaacttgaaacaaaa
gtttgggaggcctttaacccgctagtagacaagcagatagaccagttcttggtggtagca
cggtctgttggtacgtttgcccgagcgctcgattgcagtagttcagtcaggcagccgagt
ttgcacatgagcgctgcagcagcctctcgggacatcacgctgttccatgctatggacact
ttgcacaaaaatgtctatgacatttccaaggcaatctctgcgcttgtgccacaaggtggg
ccagtcctgtgcagagatgagatggaggagtggtctgcttcagaggcaaacctcttcgag
gaagcactagaaaaatatggaaaagatttcactgacattcagcaagattttctcccatgg
aagtccttaacaagcataatagagtattactatatgtggaaaactacagacagatacgtt
cagcagaaacgattgaaagcagcagaagcggaaagcaagctaaaacaagtgtatataccc
aactataacaagccaaaccccaaccagatcaatgtaaataatgtcaaaccaggagtggta
aatggtactggagtacaggcacagaacacggcagcaggacgggcctgtgagagctgttac
accacacagtcttaccagtggtattcttggggtccccctaacatgcagtgtcgcctctgt
gcatcctgttggacgtactggaagaaatacggtggcttgaaaatgccaacacggttagat
ggggagaggccaggaccaaaccgcaataatttgagtcctcatggtgtgccagtacgaaac
agtgggagccccaagtttgctatgaaaacacggcaagctttctatctccatacaacaaaa
ctgacaagaattgccagacgtttgtgtcgagatatcttgcgcccttggcacgctgcgaga
catccctatctgcccattaacagcgcagcaatcaaagcagaatgtacagcacgtttacct
gaggcatcagaaaacccattgctattaaagcaagtggttcgaaagcctttagaagcagta
ctccggtatttagagtctcatccgtgtcctccgaaaccagatcctgccaagagcttgtcc
agttctctcaacaacctgactcctgctaagtttacacctgtcattaataatggctcccca
actatcctgggaaaaagaagttacgagcaacacaatggaatggatggcaacatgaagaag
cgcctgttgatgcctagcaggggaacttacttaggtctgcctaaccacggacaaaccaga
caaatgggaccaagccgaaacttgctgctcaatgggaaatcatacccaacaaaagtccga
ttaattcgtggtggatccatgcctccagtgaaaaggaggaggatgaactggattgatgca
ccagatgatgtcttttacatggccactgaagaaaccaggaagatccgcaagctgctttcc
tcctccgaagccaagcgagccgccagacgcccttacaagcccattatcctccggcccatc
caggcagtgcagctccgccagcccatgaacgacgaacccataatcatcgaggattaa
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