Caloenas nicobarica (Nicobar pigeon): 135996851
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Entry
135996851 CDS
T11056
Symbol
LAMC2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04382
Cornified envelope formation
cnic04510
Focal adhesion
cnic04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135996851 (LAMC2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135996851 (LAMC2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135996851 (LAMC2)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
JAG1-like_EGF2
MCPsignal
DUF6090
Motif
Other DBs
NCBI-GeneID:
135996851
NCBI-ProteinID:
XP_065505193
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All DBs
Position
20:3445227..3465260
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AA seq
1178 aa
AA seq
DB search
MAGCWLLALSCLAASLLPAALGTIGGEGQVCHCNGMSRQCVFDWHLLRETGNGFRCLGCQ
GNTEGPRCERCRDGFFRRRDGDCCLPCRCHPQGALGPRCNSDGRCSCKPGVMGEKCDQCQ
PGFESLSEAGCQRSGQSLRCECDPAGSAGGCISGRCVCKASATGERCERCKRNFYNLDAR
NPAGCSPCFCYGHSAVCVSADNHSVYNITSTFQQGSEGWRGVHESGSPAQLQWSPRHQDA
FIAARRPEPIYFVAPGKFLGNQQLSYGQTLSFDYRLDRGGREPSPHDVVLEGDGLRITAP
FLPQGKVLPCGVSQTYTFRLDEHPSSKWSPRLNHLEYHRLLGNLTALWIRATFGEYSTGY
IDNVTLVSAQPRAGVPAPWVEQCECPVGYGGQFCEMCAPGYRRDAPGMGPFSICVPCNCQ
GGGICDPDTGECYSGDENVGNSIGCPFGFYRDPRQTHSCRACPCGNGQGCSVVPGSEEII
CDHCPPGAAGTNCEYCADGYFGDPAASQPCQPCQCNGNVEPNAVGNCDRQTGQCLKCIYN
TAGFYCDRCKDGFFGNPLAPDPADKCRACACDSAGAEPLKCGSDGSCICKPGFQGPRCEE
SECPACYGQVKEQVELYLQQLAELELMFSEVQAGSGAGSQELEGRMQLAEEMLRTILGEA
LSLQASDRSLESRLAMMKGQGSSSQGRLDEMKATVERLRSLGSRYERQVQDTRRLLERAR
LDLDRSGAALRWVTVPVSNLPGGSNQFSMLAQEAQSLADSHLQAANTIKEAAKAAREDAR
QALELVRAAAGGETATSGSLQGLLGKYEELKSLAGGLKAEVDEMASEADKAYQGSLVLLN
SLSHLTKTDIGSFEGEATQLKQDATALLTLVDTYMAQYRQLQARTGRWEEEIKQLLQRGE
GKRATLTQLLSRANLARSTALQAMSAGNATFYEVEQILKSLREFNLQADDKRREAEDAMR
RLPIISSMVASAREKTDRAEAILGSAASKSKAASSTAGEAKEISMGIQQEITRLRVEANK
TADGVLALEKVVATLQHEAKEVDGEFERKLSEVEMDATVIQTTAQEAQRVHAKAGQAGVA
VQETLSAMEELLRLMNQPGAVDEEGLKQLEINFSKAKTRSNQLKDELLELEQTAALQKTR
VRTLESRIDEILADIKNLEDIQRSLPPGCYNTKAIELP
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtgctggctcctggccctcagctgcctcgcggcgtctctcctgcccgcagcc
cttggcaccatcggaggagaaggacaagtgtgccactgcaacgggatgtccaggcagtgc
gtcttcgactggcacctcctgcgggagacggggaacgggttccgctgcctcggctgccag
ggcaacacggagggtccccgctgcgagcgctgccgggacggcttcttccgccggcgggac
ggggactgctgcctgccctgccgctgccacccccagggcgccctcggcccgcggtgcaac
agcgacggccgctgcagctgcaaacccggcgtgatgggcgagaaatgcgaccagtgccag
ccgggcttcgagtccctctctgaggctgggtgccagaggagcgggcagagcctgcggtgc
gagtgtgacccggcgggcagcgcggggggctgcatctccggccgctgtgtctgcaaggcg
agcgctactggagagcggtgcgagaggtgcaagagaaacttctataacctggacgccaga
aaccctgcgggatgctccccctgcttttgctacgggcactcggctgtgtgtgtcagtgcg
gacaaccacagcgtctacaacatcacctccaccttccagcaaggttctgaaggttggcga
ggtgtccacgaaagtggttccccagcccagctccagtggtccccacgccatcaggatgcc
ttcatagcagcaaggagaccagagccgatatacttcgtggcacctgggaaattcctcggg
aaccagcagctgagctacggccagacgctttcctttgattaccgcctggaccgaggggga
cgtgagccatctccgcatgatgtggtcctggaaggagatggcctgaggattactgccccc
ttcttgccccaggggaaggtcctgccctgtggtgtcagccagacgtacacattcaggctg
gacgagcacccaagcagcaagtggagcccgaggctgaatcacttggaatatcacaggctg
ctgggaaacctgacagctctctggatccgagccaccttcggggagtacagcaccggctac
atcgacaacgtcaccctggtgtcggcacagcccagggccggtgtccccgctccatgggtg
gagcaatgcgagtgcccagtgggatacgggggccagttctgtgagatgtgtgcccctggc
taccgcagagacgcccctggcatgggacccttcagcatctgtgtgccctgcaattgccag
gggggaggaatttgtgatcctgacaccggcgaatgctactcgggagacgaaaacgtgggc
aatagcattggctgccccttcggcttctaccgagacccccggcagacacacagttgcagg
gcatgtccctgcggcaacggccaaggctgctcggtggtgccgggcagcgaggagatcatc
tgtgaccactgtcctcctggagctgctgggaccaactgtgagtactgtgccgatggctat
tttggggacccagcagcttcccagccctgccagccatgccagtgcaacggcaacgtggag
cccaacgccgtgggcaactgcgaccgccagacgggccagtgcctcaagtgcatctacaac
accgctggcttctactgcgaccgctgcaaagacggcttcttcgggaaccccctggcccct
gaccctgccgacaagtgccgagcttgtgcctgtgactcggccggggccgagcccctgaag
tgtgggagcgatgggagctgcatctgcaagcccggcttccagggtccccgctgcgaggag
agtgagtgcccagcttgctacgggcaggtgaaggagcaggtggagctgtacctgcagcag
ctggcggagctggagctgatgttctcagaggtacaagctggtagtggggctgggagccag
gagctggagggaaggatgcagctggctgaggagatgctgcggaccatcctcggagaagcg
ctgagcctacaagcctctgacaggtctctagaaagccgcctggccatgatgaaggggcaa
gggtccagctcccagggccgcttggatgagatgaaggcaacagtggagaggctgaggtcc
ctggggagccggtacgagaggcaggtgcaggacactcggcggctactggagagagcccgg
ctggacctggaccgcagtggagctgctctgcgttgggtgaccgttcctgtttcaaacctt
cccgggggctcgaatcagttctcgatgctggctcaggaggctcagagcctggctgacagc
cacctacaagccgccaacaccatcaaggaagccgccaaggcagcgcgggaggacgcacga
caggcgctggagctggtgcgtgcagctgctggcggagaaacggccacctccgggtccctg
caagggctgcttggcaagtatgaggagctgaagtcgctggctggaggcctgaaggccgaa
gttgatgagatggcctccgaggcagacaaggcttatcagggcagcctggtgctcctcaac
tccctgtcccacttgacgaagacagacattggctcctttgagggggaggcaacgcagctg
aagcaggacgccactgctctcctgaccctggtggacacctacatggcccagtaccggcag
ctccaggcccgcacggggcgctgggaggaggaaatcaagcagctgctgcagaggggagag
ggcaagagagcgacgctgacgcaactgctgtcccgagccaacctcgccaggagcacagcc
ctgcaagccatgagtgctggcaatgcgaccttctacgaggtggaacagatcctgaagagc
ctccgggagtttaacctgcaagcagatgacaagagaagggaagctgaagacgccatgagg
aggctaccgatcatcagcagcatggttgcaagtgccagggagaagacagaccgagctgaa
gcgatcctgggcagcgccgcttccaaatccaaggcggccagcagcacggcaggggaagcg
aaggagatctccatggggatccaacaggaaatcacacggctgagggtggaagccaacaag
acggccgacggtgtcctcgctctggagaaggtggtggccaccctgcagcacgaggccaag
gaagtggatggtgaatttgagaggaagctctcagaggttgagatggatgccactgtgata
cagacgacagctcaagaagctcagagggtccatgccaaggctggccaggcaggggtggct
gtgcaggagacattgagcgccatggaagagctgctgcgtctgatgaaccagcctggtgcc
gtggacgaggagggcctaaaacagctcgagattaatttcagcaaagccaaaaccagaagc
aaccaactgaaagatgagctgttggagctggagcagacagccgcgctgcagaagacccgg
gtgcggacactggagagcaggattgatgagatcctggcagatattaagaacctggaggat
atccagaggagtcttcctccgggctgttacaacacaaaagccattgaactgccgtga
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