Caloenas nicobarica (Nicobar pigeon): 135996853
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Entry
135996853 CDS
T11056
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00310
Lysine degradation
cnic00514
Other types of O-glycan biosynthesis
cnic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
135996853 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
135996853 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cnic01003
]
135996853 (COLGALT2)
Enzymes [BR:
cnic01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
135996853 (COLGALT2)
Glycosyltransferases [BR:
cnic01003
]
O-Glycan biosynthesis
O-linked Gal type
135996853 (COLGALT2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
IF4E
Motif
Other DBs
NCBI-GeneID:
135996853
NCBI-ProteinID:
XP_065505195
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All DBs
Position
20:3115569..3166400
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AA seq
624 aa
AA seq
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MAASAGPRAPRPLLLLFLLGGCGASLPPEPPPPPPPSPEPEPLPESALLQPTVLLAIIAR
NAAHTLPHFLGCIERLRYPKSRIALWVATDHNVDNTTAILREWLKNVQNLYHDVEWRPME
EPQSYPEEIGPKHWPSSRFTHVMKLRQAALRAAREKWSDYILFIDTDNLLTNPETLNVLI
AENKTLVAPMLESRSLYSNFWCGITPQGYYKRTLDYPLIREWKRTGCFAVPMIHSTFLID
LRKEASTKLVFYPPHQDYTWSFDDIMVFAFSSRQAGIQMFICNREHYGFLPMPLKSHQTL
QEETENFVHTLIEAMIDRPPVEPSQYVSVPPKNPDKMGFDEIFMINLKRRKDRRDRMLRT
LYEQEIAVKIVEAVDGKALNTSQLKALSIDMLPGYRDPYSSRPLTRGEIGCFLSHYYIWE
EVVNRELEKTLVIEDDVRFEHQFKRKLVKLMDDIEQAQLDWELIYIGRKRMQVQEPEKAV
PNVMNLVEADYSYWTLGYAISFQGAQKLIGAEPFGKMLPVDEFLPIMYNKHPVAKYMEYY
ESRDLKAFSAEPLLVYPTHYTGQPGYLSDTETSTIWDNETVSTDWDRTHSWKSRQQGAIH
SDAQNKDALPSQSSLDAPSSRDEL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgagcgccgggccccgcgccccccggccccttctcctcctctttctcctgggc
ggctgcggggccagcctgcccccggagccgcctccacccccgccgccgagccccgagccg
gagcccctgcccgagtcggctctgctgcagcccaccgtgttgctggccatcatcgcccgc
aacgccgcgcacacgctgccccatttcctcggctgcatcgagcggctgcgctaccccaag
agcaggatcgccctctgggtggccactgaccacaatgttgacaataccacagcaatcctt
agagagtggctgaagaacgtgcagaacctctaccacgatgtagagtggagaccgatggaa
gaaccccagtcttacccagaagaaattgggccaaaacattggccaagctcccgattcact
cacgtgatgaaactccgacaggcagccctgcgtgctgcacgagagaagtggtcagactac
atcctgtttattgatacagataacttactgaccaacccagaaaccctgaacgtgttgata
gcagaaaataagaccttggtggcaccaatgctggagtctcgctctctctactcaaatttc
tggtgtggcatcaccccccagggctattacaaaaggaccctggattaccccctgatacga
gaatggaagaggacaggctgttttgctgtcccaatgattcattccaccttcctcatcgac
ttgaggaaagaagcctccaccaagctggtgttctaccctccgcatcaggactacacctgg
agctttgacgatatcatggtctttgccttctctagtcgccaagcagggatacagatgttc
atctgcaaccgtgaacactatggtttccttcccatgcccctgaaatcgcaccagacgctg
caagaagaaactgagaactttgtgcacaccctcatcgaggcgatgattgatcgtcctcct
gttgaaccctcgcagtatgtctctgttccgccaaagaaccctgacaagatgggatttgat
gaaattttcatgatcaacctgaagcgccggaaggacaggcgggatcggatgctgcggact
ctctacgagcaggagattgcggtcaagatagtagaggccgtggatgggaaagcactgaac
acgagtcagctcaaagctctcagcatcgacatgctgccgggttaccgggacccttactcc
tcccggcccctcactcggggagagatcggctgcttcctcagtcactactacatctgggag
gaggtggtgaacagagaactggagaagacgcttgttattgaggacgatgtccgctttgag
caccagttcaagaggaagctcgtgaagctgatggatgacattgaacaagcccagctagac
tgggagctgatctacattggccggaaaaggatgcaggtgcaggagcctgagaaagcagtt
cccaatgtcatgaacctggtggaagccgattactcatactggaccctgggctacgcgatc
tccttccagggggctcagaagctcatcggagcggagcctttcggcaagatgttgccggtg
gatgaatttctgccaatcatgtacaacaagcacccggtagcaaagtacatggagtactat
gagtccagagacttgaaagccttttcagcggaacccctgctcgtctaccccacccactac
acagggcagcccggctaccttagcgacacggagacctccaccatctgggacaacgagacc
gtgtcgacggactgggacagaacgcactcctggaaatcccggcagcagggcgcgatccac
agcgacgcccagaacaaggacgctctgccctcccagtcgtctctcgacgcgccgtcctcc
agggacgagctatga
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