KEGG   Caloenas nicobarica (Nicobar pigeon): 135996987
Entry
135996987         CDS       T11056                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135996987 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cnic03041]
    135996987 (BCAS2)
   03400 DNA repair and recombination proteins [BR:cnic03400]
    135996987 (BCAS2)
Spliceosome [BR:cnic03041]
 Complex B
  Other components
   Prp19 complex
    135996987 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    135996987 (BCAS2)
DNA repair and recombination proteins [BR:cnic03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    135996987 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 EzrA INO80F CCDC113_CCDC96_CC SCRG1 Tup_N GAS DUF3450 Phlebovirus_NSM
Other DBs
NCBI-GeneID: 135996987
NCBI-ProteinID: XP_065505423
LinkDB
Position
21:2494000..2497159
AA seq 263 aa
MCRSSASALIGGGAGARGLCGSADWRRGRRRRRAVRTMAGPGLVAGDVVVDALPYFDQGY
EAPGVREAAAALVEEETRRYRPTKNYLSYLPAHDYSAFETEIMRNEFERLAARQPLELLS
MKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNEHLV
HMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLREMESTWVSLVSKNYEIERTIVQLE
NEISQIKQQHGEANKENIQQDFQ
NT seq 792 nt   +upstreamnt  +downstreamnt
atgtgcaggagctcggcgtcagcgctgattggcgggggcgcgggtgcacgtgggctctgc
ggcagcgctgattggcggaggggccggcgcaggcgcagagccgtgcgcaccatggcgggc
ccggggctggtggccggggacgtggtggtggacgcgctgccctacttcgaccagggctac
gaggcgccgggggtccgggaggcggctgcggcgctagtggaggaggagacgcggcggtac
cggccgactaagaattacctcagttacctgccggcgcacgactacagcgccttcgagacc
gagatcatgcggaacgagttcgagcgcctggcagcccggcagcccctggagctgctcagc
atgaagaggtacgagctgccggccccgtcctccggccagaagaacgacatcacggcgtgg
caggagtgcgtgaacaactccatggcgcagctggagcaccaggccgtccgcattgagaac
ctggagttaatgtcacagcacggctgtaacgcgtggaaggtgtacaatgaacatctggtt
catatgatagaacaagcccagaaagagcttcagaagttgaggaaaaacattcaagacctg
aactggcaacgaaagaacatgcagctcacagctggggcgaaactacgagaaatggaatct
acatgggtctctcttgtcagtaaaaattatgagatcgaacgaactattgtgcagctagaa
aatgaaatttcacaaatcaaacagcagcacggggaagcaaacaaggagaatatccagcaa
gacttccagtga

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