Caloenas nicobarica (Nicobar pigeon): 135997484
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Entry
135997484 CDS
T11056
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04120
Ubiquitin mediated proteolysis
cnic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135997484 (UBE4B)
04120 Ubiquitin mediated proteolysis
135997484 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135997484 (UBE4B)
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135997484 (UBE4B)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
U-box type E3
135997484 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
135997484
NCBI-ProteinID:
XP_065506179
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All DBs
Position
22:complement(4332241..4367703)
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AA seq
1338 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRETPPAGAPAPGPSHSLGLNVHSMTPA
TSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQVDVD
SGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFLNSL
SAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPDRSL
ILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTTFTSYVPMTGSSLTPPASSVATT
SVPPITASSHLRATSPSWTQPSSPRYRPYTIAHFGGFSASSIPRSVNIPIPSSSPSPPAM
PVVPSRQRPTTMGPPLFTASPSPLRRRSSLLNRIPSSIYDNPFSLLLLAVSDVSEDSSDE
ENEDDDFSCVQFGSSMGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRVGIEERKA
PKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQE
LVRTTYQDEEVFKQIFVPILQGLAAASKECSLDSDNFKYPLMALCELCEIKFGKTHPMCS
LVVSLPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRV
VSQSLQHYLELARQELFKILHSILLNGETREAALNYMAAIVNANMKKAQMQTDDRLVSTD
GFMLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIDLPTDETRVKATMEDVTAWIAELYRD
PSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSP
LATRHREMLKRCKAQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPN
IKLPLTPEVPKVFAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNY
IRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATS
EFYDKFTIRYHISTIFKSLWQNIAHHGTFMQEFNSGKQFVRYINMLINDTTFLLDESLES
LKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQV
QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC
ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID
YSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSATDPFNRQMLTENMLEPVP
ELKEQIQAWMRDKQNADH
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggatgagattcgtcggaggcgccttgctcggctggcgggaggc
ccgtcctcccagcccaccacgccgctcacgtccccgcagcgagagaccccaccggccgga
gctccagccccagggccatcccatagtctaggcctaaatgtccacagcatgaccccagct
acctctcctataggtgcatcaggagtagcccaccgaagccagagcagcgaaggagtgagt
tcactcagcagttctccatctaacagccttgaaacacaatctcagtctctgtctcggtct
cagagcatggatattgatagtgtctcctgtgagaaaagtatgtcccaggtagatgtggat
tcaggaattgaaaacatggaggttgatgagaatgatcgcagagagaaaaggagcctgaca
gataaggaacctctgtctgggtctgaagtatcagaggaacaagctttacagctggtctgt
aagatcttcagagtgtcttggaaggaccgagatagagatgttatcttcctgaattcgctc
tctgctcagtttaagcagaacccaaaggaagtgttttcagattttaaggacttgattggg
cagattttgatggaagtgctgatgatgtccacccaggcaagggatgaaaacccgtttgcc
agtctgacagctacatcccaaccgatcgctgcagccgcccgctctcctgacagaagcctg
attttaaacatgggctcgaacccgggaagcagccccatgttctgtaacgtgggctccttt
ggttccagttcgttatccagtctctatgggactagtccagctcctcctaccactttcaca
agctatgtaccaatgactggttcatctcttaccccaccagccagctcagttgccacaaca
tctgtgcctcccattactgccagctctcacctcagagcaaccagcccttcttggacgcag
ccttcctctccgaggtaccggccatacactattgcccattttgggggcttttcagcttct
tccatcccgcgttccgtgaatattcccatcccgtctagttctccgagccctccagccatg
ccggtcgtcccctccagacagagacccacaaccatgggtccgcctttgtttactgcttca
cccagtcccttgcgcaggcgttcttctttactgaacaggatcccttctagtatatacgac
aaccctttctccctcctcctccttgccgtttctgatgtgtctgaggacagtagtgatgaa
gaaaatgaagatgatgatttttcttgtgtccagtttgggtccagtatgggaggctctggc
agctccagtgtttccgattcctgcagtgaccacttcaccattgaaaactgcaaggagaca
gagatgctgaactacctcattgagtgttttgacagagtgggaatagaggagagaaaagca
ccaaagatgtgtagccagccaacagttagccagttactgagcaacatccgatcccagtgc
atttctcacgctgctttggtgctacagggatccttaacacaaccaaggtcattgcagcag
cagtctttgctggtaccatatatgctgtgcaggaatctcccatttggcttcatccaagaa
ttggtgagaacgacttatcaggatgaagaggtgttcaaacagatctttgttcccatctta
caaggcctggctgcagcttccaaagagtgctcccttgatagtgacaattttaaatacccc
cttatggcactatgtgaactttgtgaaatcaagtttgggaaaacgcaccctatgtgcagt
ttggttgtctctttgcccttgtggttgccaaaatctttaagcacaggtgcaggaagagaa
ctgcaaagactttcctaccttggagccttcttcagtctctctgtctttgctgaagatgat
aacaaagtagttgaaaagtacttctcagggcctgccattactcttgaaaacacccgggtt
gtgagccagtctttgcaacattacctggaattagcaaggcaagagctgttcaagattcta
cacagtattttactgaatggcgaaactcgagaagcagctctcaattacatggcagctatt
gtcaatgccaacatgaaaaaggcacaaatgcagacagatgatcgtttggtatctacggat
ggctttatgctcaacttcctatgggtactacagcaactaagtacgaagataaagctggaa
acggttgatcccatgtacatatttcatcccaggtgtcgtattgacctcccaacagatgag
acaagagtaaaagcaacaatggaggatgttacagcctggattgctgaactttacagggat
ccgtctccattttctgagccgaaattcccaacggaatgtttcttcctaaccctgcatgcc
catcatctctcaatcctgcccagctgccgtcggtacatccgcaggctgcgcgccatcagg
gagctcaacaggactgttgaagatttgaagaacaatgaaagtcagtggaaggattctcct
ctggctaccaggcatcgagaaatgctgaaacgttgcaaggcgcagctcaagaaactggtg
aggtgcaaggcttgtgcggatgctggtttgctggatgaaaactttctcaggagatgtctg
aatttctatggcatggtgattcagctgatgcttcgcattcttgaccctgcctatcccaac
ataaaattgcctttaactcctgaagttccgaaggtatttgcagcattgccggagttctac
gtggaagacgttgctgaatttttattttttattgtacaatacgctcctcaggtgctttat
gagccctgcactcaggacatagtgatgttccttgttgtgatgctgtgcaaccagaactac
atccgaaatccttatttagtagccaagctggtagaagtgatgttcatgacaaatccagct
gttcaaccccggacacaaaagttctttgagatgattgagaatcatcctctctccactaaa
ttgttagtcccctccttgatgaagttttacacagatgttgaacataccggagccactagc
gaattctatgacaagtttaccatccgctaccacatcagcaccattttcaaaagcctctgg
cagaatatagctcaccatggtacatttatgcaagagttcaactctgggaagcagtttgtt
cgctacatcaacatgctgataaatgacacaactttcttgctggatgagagtttggagtcc
ctaaaacgtatccatgaagtgcaagaggagatgaagaataaagagcaatgggacctgctg
cccagggatcagcagcaggcccggcaatcgcagctggctcaggatgagcgtgtgtctcgt
tcatatcttgccctggcaacagaaactgttgatatgttccatatccttaccaagcaggtt
caaaagccttttctcagacctgaacttggaccgcgattggctgctatgttgaactttaac
ttacagcaactgtgtggccccaagtgtcgcgacctgaaagtcgaaaaccctgagaaatac
gggtttgaaccaaagaagctgttggaccaactgactgacatttatctacagctggattgt
gctcgctttgctaaagcaattgctgatgatcagaggtcctacagcaaagagctctttgag
gaggttatctccaagatgagaaaggccggcatcaagtccaccatagcaatagagaaattc
aaactgctggctgagaaagtggaggaaatagttgccaagaacgcccgtgcggaaattgat
tacagtgatgctccagatgaattcagagatccgctgatggacactctgatgaccgatccc
gtcaggctgccgtccggaaccattatggacaggtccatcatcctgaggcacctgctgaac
tctgccacggatcctttcaatcgccagatgctgacagaaaacatgctggaaccagtgcca
gaacttaaagagcaaatccaagcctggatgagagacaagcagaatgctgaccattaa
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