Caloenas nicobarica (Nicobar pigeon): 135997684
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Entry
135997684 CDS
T11056
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03013
Nucleocytoplasmic transport
cnic03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135997684 (SRRM1)
Spliceosome [BR:
cnic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
135997684 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
135997684
NCBI-ProteinID:
XP_065506554
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All DBs
Position
23:5264869..5281006
Genome browser
AA seq
892 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRLSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETIVQEATSNN
DIPKPPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKVPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRARKSRGSVSPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQR
RYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKKRSPSVSSKHRK
GSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPAPPPPRRGASASPQRRQSPSPSTRP
IRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHPGPPSPARSRSPSANWS
PAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAVAA
ADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctgttaagtgcacaagaaaacattgctggtattcca
actgcttttctggaactgaagaaagaagaaataaaacagcgacagatagagcaagagaaa
ctggcttccatgaagaaacaagatgaagacaaggagaagagggataaggaagacaaagac
aacagagaaaaaagagacagatccaggagtccaagaagacgcaagtcaaggtctccttcc
cctcgaaggaggttgtcacctgtcagaagagagcggaaacgcagccattctcgctcccct
catcacagaaccaagagccgcagtgctacccctgcgccagaaaagaaagaggcgactcct
gagccggaaccctctgtgaaaccaaaggagaccattgttcaagaggcaacttcaaacaat
gatatcccaaaacctccaaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggaaaaagagaagactcgtcaaagatcccca
actcgatccaagtcaaggtcaagatctcgatcacgttctccatctcattctcgaccaaga
agacgtcatagatcacggtcaaggtcttactcccctagaaggcgaccaagcccgagacga
agaccatccccacggagaaggagcccgccaaggcgaatgcctccccctcccagacacaga
agaagcagatcccctgtgaggcggagaagacggtcatcagcatccttatccggcagtagc
tcttcctcctcttcctcacgttcccggtcaccaccaaagaaagtacctaaaagaactgta
tccagtcctcctcgaaaaacgcgcaggctctctccttcagccagcccacctcggcggagg
cacagaccatccccaccagcaagtccacctccaaaaccacgcaggtctccaacgccccag
cagtcgaatcgtgcaagaaaaagccgtggctctgtttcacctagcagagcatcagcaccc
aaacataagagtactgaaaaaagagaatctccttctccagcaccaaaacccaggaaagca
gaactgtctgaatcagaagaagataaaggaggtaaaatggctgcagcagactctgttcaa
cagaggcgtcagtaccgaaggcaaaatcaacagtcttcatctgattctggttcttcttca
tcatctgaagaggaaagacctaaaagatccaacgtgaagaacggggaagttgggagacgc
cggcgccattcacattcacgcagcccatcaccgtcgccacgaaaacgacagaaggaatcc
tcccctcgccggaggaggagaagtccatcaccccccccagccaggcggcgccgctctcct
tcacctgcccctcctcccaggcggcgtcgctcgccttccttaccccgtcgaaggtctcca
tcaccacccccccgcagacgctcgccttctccgcggagatactccccaccgatccagcga
cgatattctccttctccaccgcctaagagacgaacggcttctcctcctcccccgcctaaa
cgaagagcatcgccttctccacagtcaaaacgcagagtctcccattccccgccgccgaaa
caaaggagctcgccagctgctaagaagcgttcgccctccgtatcttccaagcacaggaag
ggatctcctcccagcaggtccaatcgggaaacgcgttctccaccacaaaacaaacggcat
tcaccttcaccacggcctagagcttctcatacctccgcgagcccagcgccgccaccgcca
cgaaggggagcgtcagcttcgccccagagaagacagtctccatctccaagcactagaccc
atcaggagagtgtcgagaacgccagaacctaagaagactaaggcttccacaccaagtcca
cgatctgcaagacgagtatcttcatcacgctctgcatcaggatcacctgagccggcaccg
aaaaaacatccgggccccccatctcctgctcggtcccgttccccttctgcaaactggtca
cctgcaaaaaaggctaaaagcccaacccagagcccatcacctgcaaggaattccgatcaa
gaagggggtggaaagaagaagaagaaaaagaaggataagaagcataaaaaggataaaaag
cacaagaaacacaaaaaacataagaaggagaaggcggtagcagctgctgctgtggctgca
gcagataccacctcggcacaggaagagcaggaagcagagacagaacccaaaaaggagaca
gaaagtgaaccagaagacaaccttgatgacctagaaaaacacctgcgagagaaggccctg
aggtcgatgcggaaggcgcaagtgtccccaccatcctag
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