Caloenas nicobarica (Nicobar pigeon): 135997782
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Entry
135997782 CDS
T11056
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04020
Calcium signaling pathway
cnic04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
135997782 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135997782 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cnic04030
]
135997782 (PTAFR)
G protein-coupled receptors [BR:
cnic04030
]
Rhodopsin family
Others
Platelet activating factor
135997782 (PTAFR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
Motif
Other DBs
NCBI-GeneID:
135997782
NCBI-ProteinID:
XP_065506722
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Position
23:complement(6517352..6527177)
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AA seq
353 aa
AA seq
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MSEKGKAGAEGSAASYISCHIDSEFRYNLFTVFYSIIFILGFVANCYVLWIFSRIYPTKK
LNEIKIFMVNLTVADLLFLVTMPMWIVYYHHHGDWIMPEFLCNVAGCLFFVNTYSSVAFL
MVITYNRYQAVTNPIKAAQFTTQRRGIYLAAAIWIIIVGSSLYYLFDNNTNQEEIDSKNF
TRCFERYDSSGSVSAVLAIHVIICVLFYIIFFFILGWNVVIIRTLFSKTAQPRRSAHVKQ
RALWMVCTVLAVFIISFVPHHIVHLPWTLTVLEQWRKEDCQLRQQLNDAHQVTLCLLSMN
CVLDPIIYCFLTKKFQKHLSENLKSMKGSRKCSRQTTDTVIEGTIHQEDAIRI
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaagggtaaagctggtgcggaaggtagtgctgcttcctacatttcatgccac
atcgactctgagtttcgctacaacctcttcaccgttttctacagcatcattttcatcctg
ggctttgttgccaactgctacgtgctctggattttcagccgtatctaccccaccaagaaa
ctcaatgaaatcaagatattcatggtgaacctgacagtagccgacctgctcttcttggtt
acgatgccgatgtggattgtttactaccatcaccatggggactggatcatgcccgagttc
ctctgtaatgtggctggctgtttatttttcgttaacacctactcttctgttgcctttctg
atggtcatcacatacaaccgttaccaggctgtgactaatcccatcaaagctgctcagttc
accacccagagaagaggtatctacttagcagcagctatctggatcataatagtgggcagc
tctctgtattacctttttgacaataatactaatcaggaggagatcgattcaaagaatttc
acccggtgctttgagcgctacgactcttccggcagcgtttcagccgttctcgccattcac
gtcatcatctgtgtcctcttctatatcattttcttttttatactaggctggaacgtcgtc
attatcaggacactgttctccaaaacagcgcaaccgcggaggagcgctcacgtcaagcaa
agggcgctctggatggtttgcacggtgctggccgtgttcatcatcagctttgtacctcac
cacatagttcacctgccctggaccctgacggttctggagcagtggaggaaagaagattgt
cagctgcgccaacaactcaatgacgctcaccaggtgacgttgtgcctcttgagtatgaac
tgcgtgctggaccccatcatctactgcttcctcacaaagaagttccagaagcatctttcg
gaaaacctgaaaagcatgaaagggagtcgcaagtgctccaggcaaaccacggacaccgtg
atcgagggcaccattcaccaagaggatgccatcaggatctag
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