Caloenas nicobarica (Nicobar pigeon): 135997815
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Entry
135997815 CDS
T11056
Symbol
MATN1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
135997815 (MATN1)
Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
135997815 (MATN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
EGF
Plasmod_Pvs28
EGF_3
vWA_SIBA-E
EGF_LRP2
hEGF
Motif
Other DBs
NCBI-GeneID:
135997815
NCBI-ProteinID:
XP_065506777
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All DBs
Position
23:complement(1420712..1434460)
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AA seq
493 aa
AA seq
DB search
MDRIFSALLLSLLLLLQSYGVYGAPPQPRGTLCRTKPTDLVFVIDSSRSVRPHEFEKVKV
FMSRVIEGLDVGHNSTRVGVINYASAVKNEFSLKTHQTKAGLLQAVQKIEPLSTGTMTGL
AIQFAISRVFNDSEGARVKSPNFNKVAIVVTDGRPQDGVQDVSARARAAGIEIFAIGVGR
VDMHTLRQIASQPLDDHVDYVESYSVIEKLTHKFQEAFCVVSDLCATGDHDCEQICISTP
GAYKCACKEGFTLNNDGKTCSACSGGSGSALDLVFLIDGSKSVRPENFELVKKFINQIVD
SLEVSEKQAQVGLVQYSSSVRQEFPLGQFKNKKDIKAAVKKMAYMEKGTMTGQALKYLID
NSFSVINGARPGVPKVGIVFTDGRSQDYITDAAKKAKDLGFRMFAVGVGNAVEDELREIA
SEPVAEHYFYTADFRTISKIGKKLQMKICIEEDPCECKSIVNFQTKVEDLINSLQQKLEA
VAKRIEALENKII
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggacaggattttctctgccttgctgctctctctgctgctcctcctccagagctacgga
gtttatggggcacctccgcagccccgaggcacgctgtgtagaaccaaacccaccgatctg
gtgttcgtcatcgacagctctcgaagcgtgcgcccacacgagtttgagaaagtcaaagtg
ttcatgtcccgggtgatcgaggggttggacgtgggccacaactccacgcgggtgggtgtg
atcaattatgccagcgccgtcaagaacgagttctccctcaagacccaccaaaccaaagcg
gggcttctgcaagcggtccagaagatagagccgctctccactgggaccatgaccggcctg
gccatccagtttgccattagccgggtttttaatgactctgaaggggccagggtgaagtct
cccaactttaataaggtggcgattgttgtgaccgacggacgtccccaggacggagtgcag
gacgtgtcggcaagggccagagcagccggcatcgagatctttgccatcggggttggccgg
gtggacatgcacacgctgcggcagatcgccagccagcccctggatgatcatgtggactac
gtggagagctacagtgtcatagagaagctgacccacaagttccaagaagctttctgtgtg
gtgtcggacctgtgtgccactggagaccacgactgtgagcagatctgcatcagcacccca
ggagcgtacaagtgcgcttgtaaagagggtttcacgctgaacaacgacgggaagacctgc
agcgcttgcagtggtgggtcaggatctgccctggatcttgttttcctgatcgatggctcc
aagagtgtgcggcctgagaactttgagctggtgaagaaatttattaaccaaattgtggac
tccctagaggtgtcagagaaacaggcccaggttggcctggttcagtactccagttctgtc
agacaagagtttccactggggcagttcaagaacaagaaggacatcaaagcagcagtcaag
aagatggcctacatggagaaaggaaccatgacaggccaggctctgaagtacctcattgac
aattccttttccgtcatcaatggagctaggcctggtgtccccaaggtgggcatagtcttc
actgatggacggtcacaagattacatcactgatgctgcgaagaaagccaaagacttaggt
tttaggatgtttgctgtgggtgtcggcaacgcagtcgaggatgagctgagggaaattgct
tcagaaccagtagcagagcactacttctacacggctgacttcagaaccatcagcaagatc
gggaaaaagctacaaatgaaaatctgcattgaggaagatccatgtgaatgtaaatctatc
gtgaacttccagacaaaagtagaagacctcataaattcactgcagcagaaattggaagct
gtggcaaaaaggatcgaagccctggagaacaagatcatctga
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