Caloenas nicobarica (Nicobar pigeon): 135998260
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Entry
135998260 CDS
T11056
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04137
Mitophagy - animal
cnic04144
Endocytosis
cnic04145
Phagosome
cnic04148
Efferocytosis
cnic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135998260 (RAB5C)
04145 Phagosome
135998260 (RAB5C)
04137 Mitophagy - animal
135998260 (RAB5C)
04148 Efferocytosis
135998260 (RAB5C)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135998260 (RAB5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135998260 (RAB5C)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
135998260 (RAB5C)
04031 GTP-binding proteins [BR:
cnic04031
]
135998260 (RAB5C)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
135998260 (RAB5C)
Endosome - Lysosome transport
135998260 (RAB5C)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135998260 (RAB5C)
Exosomal proteins of other body fluids (saliva and urine)
135998260 (RAB5C)
Exosomal proteins of colorectal cancer cells
135998260 (RAB5C)
Exosomal proteins of bladder cancer cells
135998260 (RAB5C)
GTP-binding proteins [BR:
cnic04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
135998260 (RAB5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
135998260
NCBI-ProteinID:
XP_065507496
LinkDB
All DBs
Position
24:3970635..3982866
Genome browser
AA seq
216 aa
AA seq
DB search
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggtggagctgcccgaccgaacggaccagctgctggaaacaaaatctgc
cagtttaaactcgttctcttgggagagtcagcggtggggaagtccagccttgtcctgcgc
tttgtcaaggggcagttccacgagtaccaggagagcacgattggagctgccttcctaaca
cagacggtctgcctggatgacacaacggtgaagtttgaaatatgggacacggcaggacag
gagcggtatcacagcctggcgcccatgtattaccgaggtgcccaagcggccatcgtcgtc
tacgacatcactaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagaccttgctacc
aagagagctgtggacttccaggatgcacaaacatatgcagatgacaacagcttgctgttc
atggagacgtcggcaaagacagcgatgaatgtgaatgaaatcttcatggcaatagctaag
aaactgccaaaaaatgaaccccagaatgctcctggagggccaggtaggaatcgggtggtt
gaccttcaggagagcagtcagccgagcaggagccagtgctgcagcaattga
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