Caloenas nicobarica (Nicobar pigeon): 135998361
Help
Entry
135998361 CDS
T11056
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135998361 (TIA1)
03041 Spliceosome [BR:
cnic03041
]
135998361 (TIA1)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135998361 (TIA1)
Spliceosome [BR:
cnic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135998361 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
Calcipressin
RRM_3
Nup35_RRM_2
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
135998361
NCBI-ProteinID:
XP_065507593
LinkDB
All DBs
Position
25:complement(3048768..3061940)
Genome browser
AA seq
372 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS
TYEANTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMVSPVQQNQLGYPPAYGQWGQW
YGSAQLGQFVPNGWQVPAYGLYGQPWNQQGFSQTQSSAAWMGPNYGVQPPQGQNGSVVPN
QSGYRVAGFETP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaaatgcccaagaccctatacgtggggaacctgtcaagagacgtgaccgaa
gcgctaatcctccagctgttcagccagatcggaccctgtaaaaactgcaaaatgatcatg
gatacagctggaaatgatccgtactgctttgtggagttctacgagcaccggcacgcggcc
gcagcgctggctgccatgaacggccggaagataatgggtaaggaggtcaaagtgaactgg
gcaacgactcccagcagccagaagaaagacaccagcaaccatttccacgtcttcgtcgga
gacctcagtccagaaattacaaccgaagatatcaaagcagcttttgcaccattcggaaga
atatcagacgcacgtgtggtgaaggacatggcgacaggaaaatccaaaggctacggcttc
gtctccttcttcaacaaatgggacgcggagaatgcgatccagcagatgggcggccagtgg
cttgggggaaggcaaatccgaacaaactgggcgacgagaaaacctccggctccaaagagc
acatatgaagcaaacaccaaacaactgtcgtatgacgaggtggtcaaccagtccagcccc
agcaactgcactgtgtactgcggaggcgtcacctccggcctgacagagcagctcatgcgc
cagacattttctcctttcgggcagatcatggaaatccgagtgttccccgacaaaggctac
tccttcgtacggtttaattctcacgagagtgccgcgcacgccatcgtgtccgtcaacggg
acgacgatcgaaggacacgtcgtcaagtgctattggggcaaggagacgccggacatggtc
agtccggtgcagcagaaccagctgggctacccgccggcgtacgggcagtggggccagtgg
tacggcagcgcccagctgggccagttcgtccccaacggctggcaggtccccgcctacggg
ctgtacggccagccctggaaccagcagggcttcagtcagacgcagtcttcggcggcgtgg
atgggccctaactacggggtgcagccgccgcaggggcagaacgggagtgtcgtccccaac
caaagcgggtatcgtgtggccggatttgagacgccctga
DBGET
integrated database retrieval system
