Caloenas nicobarica (Nicobar pigeon): 135998518
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Entry
135998518 CDS
T11056
Symbol
PDLIM2
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135998518 (PDLIM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
135998518 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135998518 (PDLIM2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
LIM
PDZ_6
PDZ_2
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
135998518
NCBI-ProteinID:
XP_065507787
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Position
25:complement(4780525..4786567)
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AA seq
632 aa
AA seq
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MGRGFGVSSRHCEAQPRKFFRAASQAPLCAFGIFKMPSSAVADGVPGSRGHPEAVPVGRG
WGGAGSLSQRLGEGAAHSHGSHGARRGALGTLCHPGGRSASFPDAGFAVGCRTRGAGACG
EQQDPSLAGCWLPSQPHCPLQTPLAWPCRATNCQGGTDFLPCARPRGQRGDLACPVPPAA
PTQPAVGPQDPCVPRGFLAGEEATSPSWGNQGGKRKRRWLPAPCDSAGTRVPSPEGRRCR
CLPPRVWDPWGAGLGGATGLCLPEEQRAPRDFPTPPLPARPEPPAAMPVTVTLAGPAPWG
FRLTGGRDFGKPITVSKVTEHGKAAAGDLRPGDIIIAINGESTAEMLNVEAQNKIKQSPG
QLQLQVERSLMPPPSHTNGDTSPDRLATRFQDTLQMQEKIQGTLRASYSSSASLSPPASS
SQPLQEELASPSLHQERGSLIHQNSPLGSDLPPPPRPPSPGFGAPPDPWETCRERRRSSH
CPSPCNSLGSEPAMRRLEEDSEVYKMLQENRELRAAPRQSSTFRLLQEALEDEGGAGPAA
PFPSRLSPSARKPVAGVQKLHVCEKCGSTIATQAVRIQDGRYRHPSCYACADCGLNLKMR
GHFWVGDELYCEKHARLRYQGGPSTPAVSQHS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggggagggggtttggggtttcctcccgccactgcgaagcccagcccaggaaattcttc
cgggcagcctctcaagcccctctttgtgcgtttgggatttttaaaatgccttcctcggcg
gttgcggatggggtgccgggctcccgcggccaccccgaggctgtgccagtgggacggggc
tgggggggagcagggagcctgagccaacgtttaggggagggggctgcccattcccacgga
tcccacggcgctcgccggggtgccttggggaccctgtgccaccctgggggacgctcagca
tcctttcctgatgcgggttttgctgtggggtgcaggactcggggtgccggtgcttgcggt
gagcagcaggatccgtccctcgctggctgctggctgccctcgcagccacattgtcccctc
caaaccccgctggcttggccctgccgtgctacaaattgccaaggaggcaccgatttcttg
ccttgcgcaaggccccggggacagcggggtgacctcgcctgccccgtcccaccggctgca
ccaacacagccagcagtgggtccccaggacccttgtgtcccccgggggtttttggcaggg
gaggaagccaccagccccagctggggaaaccagggcggcaagaggaagcggcggtggctg
ccggcaccctgtgacagcgcggggacacgggtcccctccccggaaggaaggcgctgccgg
tgtctgccaccccgtgtttgggacccttggggtgcggggctggggggcgcgactgggctg
tgtctcccggaggagcagagggcaccccgggatttcccgacaccgccactccctgcccgc
ccagagccgcccgctgccatgccggtgacagtgaccttggccggcccagccccttggggc
ttccgcctcaccgggggaagagacttcgggaaacccatcaccgtgtccaaggtgacagag
cacgggaaggcagctgcaggtgacctgcgtccaggggacatcatcatcgccatcaacggg
gagagcacggccgagatgctgaacgtggaggcgcagaacaagatcaagcagagcccaggg
cagctccagctgcaggtggagaggtcactgatgccacctcccagccacaccaatggggac
acctcgccggacaggctggccacacgcttccaggacacgctgcagatgcaggagaagatc
cagggcaccctgagagcatcctactccagctccgcatctctcagccccccggccagcagc
tcgcagccccttcaggaggagctcgccagtcccagccttcaccaggagcgaggaagcctg
atccatcagaacagccccctggggtcagacctgcctccacccccccgcccaccctcgccg
gggttcggggcccccccagacccctgggagacgtgcagagaacggcgccgctcgtcacac
tgtcccagcccctgcaacagcctgggctcggaaccggccatgaggcgcttggaggaggat
tcggaggtttacaagatgctgcaggagaaccgggagctgcgggcggccccgcgacagtcc
agcaccttccgcctgctgcaggaggctctggaggacgagggcggagctggccccgcagcc
cccttccccagccggctctcgcccagcgcccgcaagcccgtggccggtgtccagaagctg
cacgtctgcgagaaatgtggcagcaccatcgcgacgcaggcggtgcggatccaggacggg
cggtaccggcacccgtcctgctacgcctgtgctgactgtggcctcaacctgaagatgcgg
ggacacttctgggtgggtgacgagctctactgcgagaagcacgcccgcctgcgctaccag
ggggggcccagcacccccgcggtgtcccagcactcctga
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