Caloenas nicobarica (Nicobar pigeon): 135998519
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Entry
135998519 CDS
T11056
Symbol
LGI3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135998519 (LGI3)
Membrane trafficking [BR:
cnic04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
135998519 (LGI3)
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_9
LRR_1
LRRCT
LRR_14
Motif
Other DBs
NCBI-GeneID:
135998519
NCBI-ProteinID:
XP_065507790
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All DBs
Position
25:4893717..4896931
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AA seq
551 aa
AA seq
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MELQRRRRMPRDQLSTLLLLLVALAWFWLPAGGRRPPRPPPCPPSCSCTRDTAFCVDSKA
VPKNLPPEIISLTMVNAAFTELREAAFAHIPSLQFLLLNSNKFTLIGDDAFTGLSHLQYL
FIENNDIQALSKATFRGLKSLTHLSLANNNLQTLPRDLFKPLDILSDLDLRGNTLACDCK
IKWLVEWLESTNTTVPATFCSSPGQFEGQRIRDLALGDFQCITTDFVVHQVLPFQAVSAE
PFTYASDLYIALAQPGASSCAILKWDYVERKLRDFDRIPAHSAVHCKPIVAQDQLYVVVA
QLFGGSYIYRWDTAVDKFIKIQDIDSQKTRKPNDIEAFQIEGDWYFVIADSSKAGSTSLY
RLNQNGFYSHQALHAWHRDTDVEYVENDGKPRLIISSSSQAPVIYQWNRAQKQFAPQGEV
GEMLDVQMVKHFKVKRDQFLCLSRYIGDSKVVRWEGQRFVELQTLPSRGSMVMQPFSVES
RRYLALGSDFSFTHVYLWEEEKQKFVKFQELSVQAPRAFRYVPAADVQLLLAPSFKANTL
VYRHVVVDLSL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcagcgcaggaggaggatgccgagggaccagctctccactctcctcctcctc
ctcgtcgccttggcctggttctggctgccagcggggggtcgcaggcccccccggccacct
ccttgccccccgagctgctcctgcacccgggacacagctttctgcgtggattccaaggct
gtgcccaagaatctaccccccgagatcatctcgctgacgatggtgaacgcagccttcacg
gagctccgcgaggcggctttcgcccacatcccctcgctgcagttcctcctgctcaactcc
aacaagttcacgctgatcggagacgacgccttcaccggcctctcgcatctccaatacctg
ttcatcgagaacaacgacatccaggcactttcgaaagccactttccgcgggcttaagtct
ctgactcacctgtccttggccaacaacaacctgcagacgctgccccgggacctcttcaag
ccactggacatcctgagtgacctggacctccgtggcaacacgctggcctgcgactgcaaa
atcaagtggctggtggagtggctggagagcaccaacaccacggtccccgccaccttctgc
agcagccccgggcagttcgagggccagcgcatccgcgacctggcgctgggcgacttccag
tgcatcaccacggatttcgtggtgcaccaggtgctgcccttccaggcggtgtcggctgag
cccttcacctacgccagcgacctgtacatcgcgctggcgcagcccggcgccagctcctgt
gccatcctcaagtgggactacgtggagcgcaagctgcgtgacttcgaccgcatccccgct
cactcggccgtgcactgcaagcccatcgtggcgcaggaccagctctacgtggtggtggcc
cagctcttcggtggctcctacatctaccgctgggacacagccgtggacaagttcatcaag
atccaagacatcgacagccagaaaacccgcaagcccaacgacatcgaggccttccagatc
gaaggcgactggtactttgtcatcgccgacagctccaaggcgggttccaccagcctctac
cgcctcaaccagaatggcttctattcccaccaagccctccacgcctggcaccgcgacacc
gacgtggaatacgtggagaacgatggcaaaccccgcctgatcatctccagcagctcccaa
gcccccgtcatctaccagtggaaccgggcgcagaagcaattcgcaccccagggggaggtg
ggggagatgctggacgtgcagatggtgaagcacttcaaggtgaagcgggaccagttcctc
tgcctcagccgctacatcggggactccaaggtggtgcggtgggaagggcagcgcttcgtg
gagctgcagacgctgccgtcccgcggctccatggtgatgcagcccttctcggtggagagc
cggcggtacctggcgctgggcagcgacttctccttcacccacgtctacctgtgggaagag
gagaagcagaagttcgtcaagttccaggagctgtcggtgcaggcgccccgggctttccgc
tacgtgccggccgccgacgtgcagctcctcctggctcccagcttcaaggccaacacgctg
gtgtaccggcacgtggtggtggacctcagcctttag
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