Caloenas nicobarica (Nicobar pigeon): 135998746
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Entry
135998746 CDS
T11056
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1
KO
K06491
neural cell adhesion molecule
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cnic04514
Cell adhesion molecule (CAM) interaction
cnic04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
135998746 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135998746 (NCAM1)
04517 IgSF CAM signaling
135998746 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135998746 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135998746 (NCAM1)
04090 CD molecules [BR:
cnic04090
]
135998746 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
cnic00536
]
135998746 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cnic00537
]
135998746 (NCAM1)
04091 Lectins [BR:
cnic04091
]
135998746 (NCAM1)
Membrane trafficking [BR:
cnic04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
135998746 (NCAM1)
Cell adhesion molecules [BR:
cnic04515
]
Immunoglobulin superfamily
NCAM1/2
135998746 (NCAM1)
CD molecules [BR:
cnic04090
]
Proteins
135998746 (NCAM1)
Glycosaminoglycan binding proteins [BR:
cnic00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
135998746 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cnic00537
]
Others
135998746 (NCAM1)
Lectins [BR:
cnic04091
]
I-type lectins (Siglecs)
135998746 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
C2-set_2
C1-set
C2-set_3
Ig_PDGFR_d4
V-set_CD47
Receptor_2B4
Pur_ac_phosph_N
VEGFR1-3_N_Ig-like
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
135998746
NCBI-ProteinID:
XP_065508018
LinkDB
All DBs
Position
26:complement(1326955..1417141)
Genome browser
AA seq
1124 aa
AA seq
DB search
MLLATVLPWTLFLLGAAASLQVDIVPSQGEISVGESKFFLCQVAGEAKYKDISWFSPNGE
KLTPNQQRISVVRNDDFSSTLTIYNANIDDAGIYKCIVSSTEEGDSEATVNVKIFQKLMF
KNAPTPQEFKEGDDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK
KTDEGTYRCEGRILARGEINFKDIQVIVNVPPSVRARQSTMNATANLSQAVTLACDADGF
PEPTVTWTKDGEPIEQDDDEDKYGFNYDGSELIIKKVDKNDEAEYICIAENKAGEQDATI
HLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISSEEKASWTRPE
KQETLDGRIIVRSHARVSSLTLKEIQYTDAGEYVCIASNTIGQDSQAMYLEVQYAPKLQG
PVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDS
ENDFGNYNCTAVNRIGQESSEFILVQADTPSSPSIDRVEPYSSTAQVEFDEPEATGGVPI
LKYKAEWRALGEGEWHSRLYDAKEANVEGMITITGLKPETTYSVRLSAVNGKGVGEISLP
SDFKTQPVRIPHSREPSAPKLEGQMGEDGNSIKVNVIKQDDGGSPIRHYLIKYKAKHSSE
WKPEIRIPSGSDHVMLKSLDWNAEYEVYVIAENQQGKSKPAHYAFRTSAQPTAIPASTSP
TSGLGTAAIVGILIVIFVLLLVAVDVTCYFLNKCGLLMCIAVNLCGKSGPGAKGKDMEEG
KAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPEHPADTAATVEDMLPSV
TTGTTNSDTVTETFATAQNSPTSETTTLTSSMALPAAAIPDSNSVSPGQATPAKGAATSV
SSPPPSSTPKVAPLVDLSDTPSSTVATNNLSSSVLSNQGAVLSPSAVANVAEAAKVAAGN
KPAASSPANLTSPPAPSEPKQEVSSTKSPEKEAVQPSAVKSPTEATKNPSNLKSEAASGS
TANPSQNEDFKMDEGTFKTPDIDLAKDVFAALGTTTPPNVASGQAHELASSTADSSVPAA
PAKTEKIPVEDKSEAQATETKTPPAEVKTVPNEATQTNENESKA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggccaccgtgctgccctggacgttgtttttgctcggagccgcagcctctcta
caagtggacattgttccaagccagggggagatcagtgttggagaatctaagttcttccta
tgtcaagtggcaggggaggccaaatacaaagacatttcctggttttcccctaacggggag
aagctgacgccgaaccaacagcggatctcagtggtgcgaaacgatgacttctcctccact
ctcaccatctacaacgccaacattgacgatgctggcatctataaatgcattgtcagtagc
acggaggagggagactctgaggccaccgtcaatgtgaaaattttccaaaagctgatgttc
aagaatgctcccactcctcaggagttcaaggaaggagacgatgctgtgattgtgtgtgat
gtggtcagctcgctgcctcctactatcatctggaagcacaaaggcagggacgttatccta
aagaaagatgttcgatttatagtcctgtccaacaactacctgcagatccggggaatcaag
aaaacagatgaagggacgtaccgctgtgaggggcggatcttggctcgtggggagatcaac
ttcaaagatattcaggtcatcgtaaatgtccctccttctgtgcgtgccaggcagagcact
atgaatgccactgccaacctcagccaggctgtcaccttagcatgtgatgccgatggcttt
cctgagccaaccgtgacgtggacaaaggatggagagccaatagaacaggacgatgacgaa
gacaagtacggctttaactacgatgggtctgagctcatcatcaagaaggtggataagaat
gacgaagcagaatacatctgcattgctgagaacaaggctggcgagcaggatgccaccatc
catctcaaagtctttgcaaaacccaagatcacctatgtggaaaataaaacagccatggag
ctggaggatcagattacactaacctgtgaggcatcaggggacccaatcccttccatcact
tggagaacttccacccgaaacatcagcagtgaagagaaggcttcgtggacccggcccgag
aaacaagagactctggacgggcgcatcatagtacgtagccatgcccgggtgtcgtccctg
actctcaaagaaattcagtacacagatgcaggagaatatgtttgcatagccagcaacacc
atcggacaggactcccaagccatgtaccttgaagtgcagtatgcccccaagcttcagggc
cctgtggctgtctatacttgggaagggaatcaagtgaacatcacctgtgaggtgtttgct
taccccagtgctgtcatctcctggtttcgggatggacagctgcttcccagctcaaactac
agcaacatcaagatctacaacactccatcagcaagctacctggaggtgacaccagactct
gaaaatgacttcgggaactataactgcactgctgtgaaccgcattggccaggagtcctcg
gagttcattcttgtgcaggcagatactccgtcctctccttccattgacagagtggagccc
tactccagtactgcccaggtggagtttgatgagcctgaagctacgggtggggtgcccata
ctcaagtacaaagcagagtggagggcactgggcgaaggagaatggcattcaaggctgtat
gatgcaaaagaagcaaatgtggagggcatgatcactatcactggcctgaaacctgaaaca
acctactctgtgagactgtctgcggtcaacggcaagggggtgggtgagattagcttgcca
tccgacttcaagacacaaccagttcgcatccctcactcacgggaacccagcgcacccaag
ctggaaggtcagatgggagaagatggaaactccattaaagtgaacgttatcaagcaggat
gatggtggctccccaattagacactatctgatcaaatacaaagctaagcattcctcagaa
tggaaaccagagatcagaattccatctggcagtgaccacgtcatgctcaagtccctggac
tggaatgcggagtatgaggtttatgtgatagctgagaaccagcaagggaaatccaaacca
gctcactacgctttccgaacttctgctcagcctactgccatcccagccagcactagccct
acatcaggccttgggactgctgccattgtaggcattctcattgttatctttgtgctgctc
ctggtggctgtggatgtcacctgctacttcctgaacaagtgtggtctcctgatgtgcatt
gcggtcaacctatgcggcaaatccggcccaggagccaagggcaaagacatggaggagggc
aaagccgccttctcgaaagacgagtcgaaggagcctattgtggaggtgcggactgaagag
gagcggacccccaaccacgatggaggaaaacacacagagcccaatgagaccaccccgctg
acagagccagagcaccccgccgatactgcagctactgttgaggacatgctgccttctgta
actacgggcaccactaactctgacactgtcactgaaacctttgccactgctcagaacagc
cccaccagtgagaccactacgctgacctccagtatggccctgccagctgcggccattccc
gactcaaactccgtgtcgcctggccaggctactccagccaaaggggcagccacctcagtc
tcttcaccaccaccctcctccacccccaaagtggcccccctcgttgatctcagcgacacc
ccaagctctactgtagctactaacaatttgtcttcaagtgtcctgtccaaccaaggtgca
gtgctcagccccagcgctgttgcaaacgtggccgaggccgccaaagtggcagctggtaac
aagccagctgcctcaagccctgcaaacctcactagccctccagctccatcagagcccaag
caggaggtctccagcaccaagagccctgaaaaggaagctgtgcagcccagtgcagtgaag
agcccaacagaggcaaccaagaacccaagcaatctgaagagcgaggctgcttcaggcagc
accgcaaacccctcccagaatgaggactttaaaatggacgaagggaccttcaagacacca
gacattgatcttgcaaaggatgtttttgcagctcttggcactactactcctcccaatgtg
gctagcgggcaggctcatgagcttgcttcttccactgcagacagctctgtacctgctgcg
cctgcaaagaccgagaaaatcccagtagaagacaaatctgaagcgcaagcaacggaaact
aagacacctccagcagaagtcaagacggttcccaatgaagccacacaaacaaatgaaaat
gagagcaaagcatga
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