Caloenas nicobarica (Nicobar pigeon): 135998751
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Entry
135998751 CDS
T11056
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135998751 (DSCAML1)
Cell adhesion molecules [BR:
cnic04515
]
Immunoglobulin superfamily
Other
135998751 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
135998751
NCBI-ProteinID:
XP_065508028
LinkDB
All DBs
Position
26:complement(992311..1088089)
Genome browser
AA seq
2058 aa
AA seq
DB search
MEQGGWRGLTVRWLCMLERCCEDKFVTAWEVLCGNRLTPAHAEDVGTSLYFVNDSIQQVT
FSSTVGVVIPCPAAGSPSAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFI
HDNDYFCTAENSAGKIRSPNIRVKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYV
SVVSWEKDTVSIIPENRFFITSYGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGARL
SVSDPAESIPTMLDSFQSREVRTGRPVELPCIASGYPNPAVRWIKDGRPLPADSRWTKRI
TGLTISDLRVEDSGTYICEVTNTFGSAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSC
ALSGSPEYVIRWYRNTDLVAVDDYISIRGISNETLLITAAQKSHSGAYQCFATRRSQTAQ
DFSIITLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPIARDSGHRT
NQYTMSDGTTVSHMNVTGPQIKDGGVYRCTARNSVGSAEYQARINVRGPPSIRAMKNITA
VAGRDTFINCRVIGYPYYSIKWYKDSLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCS
VLIQPQLSISQSVHVTVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHV
ILSGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQP
NNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRH
VLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKGQTKELNCTARGER
PIIIRWEKGDTVIDPDRNMRYAIATKDNGDEVISTLKLKPADRGDSVFFSCHAINSYGED
RGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQS
TRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQ
PMTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNL
KKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRAISITSDVAVISWSEPPR
STLNGVLKGYRVIFWSLYMDGEWGEMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDG
VRSSVLYIQTKEDIPGPPAGIKAVPSSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQP
APSEYETSPDQLFYRIAHLSRGQQYLLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFG
GTVTTPWMKDVRLPCNSVGEPVPAIKWTKDSEDSAIPVTVDGHRLIQPNGTLVLRSVKAE
DSGYYTCTATNTWGFDTIIINLLVQVPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGF
VLQYSVDNSEEWKDVFISSSERSFKLESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHG
REPSFSKDQHLFTHINSTHARLNLQGWSSGGCPITAIVLEYRPKGNWLWQSLRTNSSGEV
FLTELREATWYELRMKACNSAGCGNETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIA
CPVILATLGVALLFVIRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLH
IDIPRVQLLIEDKEGIKQLGDDKATIPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPL
IDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGIT
VTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQHAKFEITECFI
SDSSSDQMTTGTTDNADSMTSMSTPSEPGICRFTASPPKPQDSERGKSVAVPIPHRASKS
DYCNLPLYAKAEAFFRKAEAAAPCPVVPPRDSARGPARAYHPPGRHLTLEPGPKPPGLPP
PAPAATTLPQRTLPMPGTTGAAPAASAAPLPPAGAEPPASAAAKVGGSRDSLLEMSTSGG
GRPQKPGAGAYSKSYTLV
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggtggctggcgagggctcaccgtgcgctggctctgcatgctggagaggtgc
tgtgaggataagttcgtgactgcgtgggaagtgctttgtggaaatcggctcacgccagca
catgctgaagatgttggaaccagcctctactttgtgaacgactctatccagcaggtcacc
ttctccagcacagtgggggtggtgatcccctgcccggcagcagggtcacccagcgccgtc
cttcggtggtacctggccacgggcgacgacatctacgatgtgccccacatccggcatgtc
catgccaatgggactttgcagctctaccccttctcgccatcagccttcaatagctttatc
cacgacaacgactacttctgcaccgcggagaactcggctggcaaaatcaggagcccgaat
atccgtgttaaagcagttttcagggaaccgtacactgttcgggtggaggaccaaaggtcg
atgcgtggaaacgtggctgttttcaagtgcctcatcccctcttcagtgcaggaatacgtt
agcgttgtgtcctgggagaaagacaccgtttctatcatcccagaaaataggttttttatt
acttcttacggaggtttgtacatatcggacgtgcagaaggaagatgccttgtccacctac
aggtgtatcaccaagcacaagtacagcggggagacgcggcagagcaatggagcccggctc
tcggtctcagacccggcggagtccatccccaccatgctagacagcttccagtcgcgggag
gtgaggacgggccggccggtggagctgccctgcatcgcctcgggctaccccaacccggcc
gtgcgctggatcaaggacgggcgcccgctccccgctgacagccgctggaccaagcgcatc
acgggcctgaccatcagtgacctgcgcgtggaggacagcgggacctacatctgcgaggtc
accaacaccttcggctccgcagaggtcacagggaccctcacggtcatagaccctctgcgt
gtgaccctcacaccaaagaagctcaaaacgggcatcggcagcaccgtcatcctctcttgt
gccctcagcgggtcccctgagtacgtcatccgctggtaccgcaacacggacctggtggcg
gtggatgactacatctccatccgtggcatcagcaacgagaccctcctcatcacggccgcc
cagaagagccactcgggcgcctaccagtgctttgccacccgcaggtcccagacggcacag
gacttctccatcatcacgctggaggatgggaccccccgcatcgtctcctccttcagcgag
aaggtggtcaaccccggggagcagttctccctgatgtgtgccgccaagggggcccccccg
ccgaccgtcacctgggcgctggacgatgagcccatcgcgcgggacagcgggcaccgcacc
aaccagtacaccatgtcagacggcaccaccgtcagccacatgaacgtcacgggcccgcag
atcaaggacggcggcgtctaccgctgcacggcgcggaactcggtgggcagcgccgaatac
caagcgcgaataaacgtaagaggtcccccgagcatccgagcgatgaagaacataacggcg
gtagcgggtagggacactttcatcaactgcagggtgatcgggtacccatattactccatc
aagtggtacaaggactctttgctgctgcccgataaccaccgccaagtggtctttgagaac
gggactctcaagctgatggacgtgcagaaaggcatggatgaaggggagtatctgtgcagt
gtgctgatccagccccagctctccatcagccagagcgtccacgtcaccgtgaaagtcccg
ccgctgatccagcccttcgagttcccgccagcctccatcgggcagctcctctacatcccc
tgcgtggtgtcctccggggacatgcccatccacatcacctggaggaaggacggccacgtc
atcctctccggctccggggtcaccatcgagagcaaggagttcatgagctccctgcagatc
tccagcgtctccctcaagcacaacggcaactacacctgcatcgccagcaacgacgctgcc
acggtcagccgggagcggcagctcatcgtgcgggtgcctcctcgttttgtggtccaaccc
aacaaccaagatggcatttatggcaaagctggggtgctgaattgctccgttgatggatac
ccccctccaaaagtcatgtggaaacacgccaaagggagcggcaacccccagcagtaccac
cccatcccgctgacgggccgcatccagatcctgcccaacagctcgctgctcatccgccac
gtgctggaggaggacatcggctactacctctgccaggccagcaacggcgtgggcaccgac
atcagcaagtccatgttcctcaccgtgaagatcccggccatgatcacctcccaccccaac
accaccatcgccatcaagggccagaccaaggagctgaactgcacggcccggggcgagcgg
cccatcatcatccgctgggagaagggggacaccgtcatcgaccccgaccgcaacatgcgc
tacgccatcgccaccaaggacaacggcgacgaggtcatctccaccctcaagctgaagcca
gccgaccgcggggactcggtcttcttctcctgccacgccatcaactcctatggcgaggac
agaggcttgatccagctcaccgtccaagagcccccggacccaccggagctggagatccgc
gaggtgaaagcccggagtatgaatttgcgatggacgcagcggtttgacggcaacagcatc
atcaccggcttcgacattgagtacaagaacaagtcagattcctgggattttaagcagtct
acgcgcaacatctccccgaccatcaaccaggcgaacatcgtggacctgcaccccgcctcg
gtgtacagcatccgcatgtactccttcaacaagatcgggcgcagcgagcccagcaaggag
ctcaccatcagcacggaggaagcagctcccgacgggcctcccatggatgtcaccttgcag
ccgatgacgtcccagagcatccaggtcacctggaaggcccccaagaaggagctgcagaac
ggggtgatccgcggctaccagatcggctaccgggagaacagcccgggcagcaacgggcag
tacagcatcgtggagatgaaggccacgggggacagcgaggtctacacgctggacaacctg
aagaagtttgcgcagtacggggtggtggtgcaggcgttcaaccgcgcggggacgggaccc
tcgtccagcgagatcaacgccaccacgctggaggacgttcccagccagccccccgagaac
gtgcgggccatctccatcacgtcggacgtggccgtgatctcctggtcagagcccccacgc
agcaccctcaacggggtgctcaaggggtaccgggtcatcttctggtccctctacatggac
ggagagtggggcgagatgcagaacatcacgacgacgcgggagcgcgtggagctgcgcggc
atggagaagttcaccaactacagcgtgcaggtgctggcgtacacccaggcgggcgacggc
gtccgcagcagcgtgctctacatccagaccaaggaggacattccaggtcccccggccggc
atcaaggctgtgccctcgtccgctagcagcgtggtggtgtcctggctgccgccggccaag
cccaacggcatcattcggaagtacaccatcttctgctccagccccggctcggggcagccg
gcccccagcgagtatgagaccagccccgaccagctcttctaccgcatcgcccacctgagc
cgtgggcagcagtacctgctgtgggtggccgccgtcacctccgccggccgcggcaacatc
agcgagaaggtcaccatcgagcccgccgggaaagcccctgccaagatcatctccttcggg
ggcaccgtcaccaccccctggatgaaggacgtgcggctgccctgcaactccgtgggggag
ccggtccccgccatcaagtggaccaaggacagcgaggactccgccatcccggtgacggtg
gacggccaccggctgatccagcccaatggcacattggtgctgcgctcggtgaaagccgag
gactccggatactacacctgcaccgccaccaacacctggggcttcgacaccatcatcatc
aacctgctggtgcaagtgcccccggaccagccccgcctgaccgtctccaagacctcggca
tcgtccatcacgctggcctggattcccggggacaacgggggcagctccatccgaggcttc
gtgctgcagtactcggtggacaacagcgaggagtggaaggacgtgttcatcagctcctcc
gagcgctccttcaagctggagagcctcaagtgcggcacctggtacaaggtgaagctggcg
gccaagaacagcgtcggggccggccgcatcagcgagatcatcgaggccaagacccacggc
agagagccctccttcagcaaggaccagcacctcttcacgcacatcaactccacgcacgcg
cggctgaacctgcagggctggagcagcgggggctgccccatcaccgccatcgtcctggag
taccggcccaagggcaactggctgtggcagagcctgcgcaccaacagctccggcgaggtc
ttcctcaccgagctgcgcgaggccacctggtacgagctgcgcatgaaggcctgcaacagc
gcgggctgcggcaacgagaccacgcagttcgccacgctggactacgacggcagcaccatc
ccccccatcaagtccgcgcagggggagggggacgacgtgaagaagctcttcaccatcgcc
tgccccgtcatcctggccacgctgggggtggccctgctcttcgtcatccgcaagaagagg
aaggagaagcggctgaagaggctgcgggatgccaagagtctggctgaaatgctgatcagc
aagaataaccgcagctttgacacgccggtgaaggggcccccgcagggcccccgcctgcac
atcgacatcccgcgggtccagctgctcatcgaggacaaggagggcatcaagcagctgggg
gatgacaaagccaccatcccggtgaccgacacggagttcagtcaggcggtgaacccccag
agcttctgcacgggcgtctcgctgcatcaccccgctctgatccagaacacgggacccctc
atcgacatgtcggacatccgccctggcaccaacccggtgtccaggaagagcgtgaagtct
gcgcacagcacccgcaaccggtactccagccagtggaccctcaccaagtgccaggcgtcc
acccccgcccggaccctcacctccgactggaggacagtggggtcccagcacggcatcacg
gtcaccgagagcgacagctacagcgccagcctctctcaggacacagacaagggccggaac
agcatggtgtcgacggagagcgcctcgtccacctacgaggagctggctcgcgcctacgag
cacgccaagctggaggagcagctgcagcacgccaagttcgagatcacggagtgcttcatc
tccgacagctcctccgaccagatgaccaccggcaccaccgacaacgccgacagcatgacc
tccatgagcaccccctcggagccgggcatctgccgcttcaccgcctccccccccaagccc
caggacagcgagcgcggcaagagcgtggccgtccccatcccgcaccgcgccagcaagagc
gactactgcaacctgccgctgtacgccaaggccgaggcgttcttccgcaaggcggaggcg
gccgcgccctgcccggtggtgccgccccgcgactccgcccgcggccccgcccgcgcctac
cacccccccggccgccacctgaccctggagcccggccccaagccccccgggctgccgccc
ccggcccccgccgcaaccaccttacctcagcggactctccccatgcccggcacgacgggg
gctgcgcccgccgccagcgccgccccgctgccccccgccggcgccgagccccccgccagc
gccgccgccaaggtggggggctccagggactcgctcctagagatgagcacgtcggggggc
ggccggccccagaagccgggggccggagcctactccaagtcctacacgctggtgtag
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