Caloenas nicobarica (Nicobar pigeon): 135998902
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Entry
135998902 CDS
T11056
Symbol
CADM1
Name
(RefSeq) cell adhesion molecule 1 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135998902 (CADM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135998902 (CADM1)
Cell adhesion molecules [BR:
cnic04515
]
Immunoglobulin superfamily
Nectin family
135998902 (CADM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
Izumo-Ig
Adeno_E3_CR1
MUCL1
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
135998902
NCBI-ProteinID:
XP_065508271
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Position
26:complement(540915..664949)
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AA seq
460 aa
AA seq
DB search
MAGRAQRSGPAARGGAPGLLPPLLLLLCAAALVPTGDGQNLVTEDVTVVEGDVATISCRV
KNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQL
YTDPPQEIYTTITVLVPPRNLVIDIQKEIAVEGEEIELNCTAMASRPATTIRWFKGNKEL
TGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRV
SQNYPVQGLTREGEPLELTCAAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTD
NGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVHG
FTQLPNSAEELDSGDLSDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIVLGRYFARH
KGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcgcccagcgcagcggccccgcggcccgcggcggcgccccggggctcctc
ccgccgctgctgctgctgctctgcgccgccgccctcgtccccacaggtgacggtcagaat
ttggtgacggaagatgtgacggtggtggagggagacgtcgccaccatcagctgccgagtc
aagaacagcgacgactcggtgattcagctcctgaaccccaacagacaaacgatttatttc
agagacttcagaccgctcaaggacagcaggttccagctggtgaacttctccaacagcgag
ctgcgcgtgtccctgaccaacgtctccatctccgacgagggccggtacttctgccagctc
tacaccgaccccccgcaggagatctacaccaccatcaccgtgctggtcccgccacgcaac
ttggtcattgacatccagaaagaaatcgctgttgaaggagaagagatcgagctgaactgc
accgccatggccagcagaccagccaccaccatcagatggttcaaaggcaacaaggagctc
actggcaagtcggaggtggagcagtggtctgacatgtacacggtgaccagccagctgctg
ctcaaggtgggccgcgaggacgacggcgtccccgtcatctgcctggtggatcaccccgcc
gtcaaggacttgcagacacagcgctacctggaagtcatgtataagccccaggtgcgggtg
tctcagaactacccggtgcaaggcctgacgcgggagggcgagccgctggagctgacctgc
gccgccttcgggaagccacagcctacggacatgaggtggttaagagtagatgatgagatg
cctcaacacgttgtagtgtctggttcaaaccttctcattagtaacctaaacaaaacagat
aatggtacataccgctgtgaggcttcaaacgcggtggggaaatcacatgcggattacatg
ctgtttgtatacgatccccccacaactatccctcctcccacaacaaccaccaccactacc
accaccatccctaccaccatcacagacacaacggcgacgacagaaccggcagttcacggc
tttactcagttgcccaattccgcagaggagctggactctggggatctctcagattctcgc
gcgggtgaggagggggcgatccgcagcgtggaccacgcggtggtcggcggcgtggtggcc
gtggtggtgttcgccatgctctgcctgctcatcgttctagggcggtactttgccagacat
aaaggtacgtacttcacccacgaagccaaaggcgcggacgacgcggctgacgcggacaca
gccatcatcaacgcagagggggggcagaacaactcggaggagaagaaggagtacttcatc
tag
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