Caloenas nicobarica (Nicobar pigeon): 135998966
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Entry
135998966 CDS
T11056
Symbol
ELAVL1
Name
(RefSeq) ELAV-like protein 1
KO
K13088
ELAV-like protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135998966 (ELAVL1)
03041 Spliceosome [BR:
cnic03041
]
135998966 (ELAVL1)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
135998966 (ELAVL1)
mRNA cycle factors
Stress granule specific factors
135998966 (ELAVL1)
Spliceosome [BR:
cnic03041
]
Common components
Common spliceosomal components
General mRNP proteins
135998966 (ELAVL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
BRAP2
RRM_3
BA_2335-like
E2
Motif
Other DBs
NCBI-GeneID:
135998966
NCBI-ProteinID:
XP_065508385
LinkDB
All DBs
Position
27:complement(5348570..5386959)
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AA seq
326 aa
AA seq
DB search
MSNGYEDHMAEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHS
LGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQK
DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPIT
VKFAANPNQNKNVALLSQLCHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNA
SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAM
AIASLNGYRLGDKILQVSFKTNKSHK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatggttatgaagatcacatggctgaagactgcagggatgatatcggtagaaca
aatttaattgtgaactacctccctcagaacatgacgcaagatgagttacggagtctattt
agcagtattggcgaagtcgaatctgcaaaacttattcgggacaaagttgcaggacacagc
ttaggctacggctttgtgaactacgttactgcaaaagatgctgaaagagcaataaacaca
ctgaacggcctcagactccagtcaaaaactatcaaggtttcctatgctcgtccaagttct
gaagttatcaaggatgctaatttatatattagtggactgccaaggtcaatgacacaaaaa
gacgtagaagatatgttttcacgttttggacgcatcatcaactcgcgtgtgctcgtggat
caaaccacaggtttgtccagaggggtcgcatttatccggtttgacaaaaggtcagaagca
gaagaggcaattacaaatttcaatggtcacaaacccccaggttcctccgaacccattaca
gtgaagtttgcagccaaccccaaccagaacaaaaacgtggccctgttatcgcagctgtgt
cactcacccgctagacggttcggagggcccgtgcaccaccaggcgcagagattcaggttc
tctcctatgggtgtagatcacatgagtgggctttctggtgtaaatgttccaggaaacgca
tcttctggctggtgtatcttcatctacaaccttggtcaagatgctgatgagggaatcctc
tggcagatgtttggcccctttggtgcggttaccaatgtgaaagttattcgagatttcaac
accaacaagtgcaaaggttttggttttgtgaccatgacaaactatgaagaagctgcaatg
gccatagcaagtcttaatggctaccgcctgggggacaaaatcttacaggtttccttcaaa
accaacaagtcccacaaataa
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