Caloenas nicobarica (Nicobar pigeon): 135999057
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Entry
135999057 CDS
T11056
Symbol
DDX49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnic03009
]
135999057 (DDX49)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135999057 (DDX49)
Ribosome biogenesis [BR:
cnic03009
]
Eukaryotic type
90S particles
Helicases
135999057 (DDX49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
135999057
NCBI-ProteinID:
XP_065508566
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All DBs
Position
27:complement(2712648..2717544)
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AA seq
479 aa
AA seq
DB search
MAEFRALGLAPWLAEQARQVGLSRPTPVQAACIPPVLQGRDCLGCAKTGSGKTAAFVLPV
LQVLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRK
PHVVIATPGRLADHLRSSNTFSLKKLRFLVLDEADRLLEQGCADFTGDLEVILDAVPPRR
QTLLFSATLTDTLNELKSLTANRPFFWEAASEVRTVDELDQRYLLVPEAIKDAYLVHLIQ
TFQDEHEDWSIIIFTKTCKDCQVLNMMLRRYKFPSVALHSMMKQRQRFAALAKFKSSIFK
ILIATDVAARGLDIPAVQVVINHNTPGLPKIYIHRVGRTARAGRKGMAITLVTQYDIHLV
HAIEEEIKLKLQEFSVEEQRVLDIVTQVNVTRRQCEIELEGTDFDEKKEINKRKQLILEG
KDPDLEAKRKAELAKIKKKNKQCREKVQQTLQKRKELQLKRKLRKKMERRNKLSAKEEN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttccgggcgctggggctggcgccgtggctggcggagcaggcgcggcaggtg
gggctgagccggcccacgcccgtgcaggccgcctgcatcccgcccgtgctgcagggtcgc
gactgcctgggctgcgctaagacgggcagcgggaagacggcggcgttcgtgctgccggtg
ctgcaggtgctctccgaggatccctacggcatcttctgcctcgtgctgacccccaccagg
gagctggcgtaccagatcgccgagcagttccgcgtcctggggaagccgctcgggctgaag
gactgcgtggtggtgggcggcctggacatggtggcgcaggcgctggagctctcccgcaaa
ccccacgtcgtcatcgctacgcccggcaggctggcggatcacctccgcagttccaacacc
ttcagccttaaaaagctccggttcttggttttggacgaagctgaccggctgttggagcag
ggctgcgctgacttcaccggggacctggaggtgattctggatgccgttccgccgcgcaga
cagacgctgctgttcagcgccacgttaaccgacacactgaacgagctgaagagcctgacg
gccaacagacccttcttctgggaggctgcgtccgaggtgcggacagtggatgagctggac
cagcgctacttgcttgtccccgaagcgatcaaggacgcgtacctcgtccatttaatccag
accttccaggacgagcacgaagactggtccatcattatctttaccaaaacctgcaaggac
tgccaggtgttgaacatgatgctgaggagatacaagtttccctccgttgctctgcattcc
atgatgaagcagcgacaacgctttgcagctttagccaagttcaagtccagcatctttaag
atcctcattgccaccgatgttgctgccagaggtttggacattcctgcagtacaagttgtc
atcaatcacaacactcccggcctgccaaaaatctacattcaccgggttggccggacagca
cgtgcgggtcggaaaggaatggccattacgctggtgacacagtacgacatccacctcgtc
cacgctattgaggaggaaatcaagctgaagctgcaggagttctccgtggaggagcagcgt
gtgctcgacatcgtcacccaagtgaacgtcaccaggcggcagtgtgaaatcgaactggag
ggaacggattttgatgagaagaaagaaataaataagcggaagcaactgatcctcgaaggg
aaggatccagatctggaggcaaaaaggaaggcagagctggccaagataaagaagaaaaac
aagcaatgccgtgagaaggtccagcagacactgcagaagagaaaggagctgcagctgaag
aggaaactgcggaagaagatggagcggcggaacaaactgagcgctaaggaagagaattaa
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