Caloenas nicobarica (Nicobar pigeon): 135999074
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Entry
135999074 CDS
T11056
Symbol
SIN3B
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135999074 (SIN3B)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
135999074 (SIN3B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
135999074
NCBI-ProteinID:
XP_065508596
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Position
27:complement(3342945..3357423)
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AA seq
1197 aa
AA seq
DB search
MPVERPEAARAPGGREGSGPGRAGSCALTHRSARADGGRAGQGRGRGGGRGAXARCCPTP
NMAAGGGGGGGRGGSAPRWGGGGGRAAAQEKLPVHVEDALSYLDQVKIRFGSDPATYNGF
LEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIEIPKNGKLSIQSPLN
SQVPAEPPSTVPGGGLLLHYSQENSHNHSDCAEEFRQQLPYKEDKSQIPLESDSVEFNNA
ISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANLFRGQE
DLLSEFGQFLPEAKRSLFTGNGPCEVNSVQKTEHEKNLEHSKKRSRPLLLRPVSGPAKKK
MKLRGTKDLSVATVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELL
QLVTPFLGKFPELFAQFKSFLGVKELSFASPLSDRSGDGMSREIDYASCKRIGSSYRALP
KTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVV
LETNLATIRVLESVQKKLSRLTQEDQEKFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIE
SLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTK
ALRSKSLLNEIESVYDEHQEQHSEGRSSSTNEPHLIFIYEDKQILEDAASLVSYYVKRQP
TIQKEDQATIRQIVHHFIPELFFSQPPEHNISEESTDEDRENHQGQNLETPELRKKHVPG
PPSSPVEAKATFCDATAAEPHNALDDVYSLFFVNNNWYFFLRLHQTLCSRLLKIYRQAQK
QLLEYRTEKEREKLLCEGRKEKTNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNID
PTQYEDTLREMFTIHAYIGFTMDKLVQNIVRQLHHLVSDDICLKVVELYLSERKHGAAGG
NLSSRCVRAAKETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEETQTEDPVEV
QHLANYMEQYVGVEGAPNNQNDGFLLKPVFLQRNLKKFRKWQCKQVRALRSEVKSSWKRL
IGVESACNVDCRFKLNTHKMMFIMNSEDYMYRRGALCRAKQVQPMVLLKHHQQFEEWHNR
WLEENVTMEAVDVVQDWLMGDEDEEMVPCKTTCETVNVHGVPVNRYRVQYSRRPASP
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgccggttgagcggccggaagccgcgcgcgctcccggcggccgcgaaggttccgggccg
ggccgggcgggctcgtgcgcgctgacgcaccgctccgcacgcgctgacggcgggcgcgcg
gggcaggggcggggccggggcggggggcgcggcgcgngcgcgcgctgctgcccgactccc
aacatggcggcggggggcggcggcggcggcggccgggggggcagcgccccgcggtggggc
ggaggaggcggccgggccgcggcgcaggagaagctgccggtgcacgtggaggatgcgctt
tcctacctggaccaggtgaagattcgcttcggcagcgaccctgccacctacaacggcttc
ctggagatcatgaaggagttcaagagccagagcatcgacacacctggagtaatccgacgc
gtttcacagcttttccacgagcatcctgacctcatcgtaggattcaatgctttccttcct
ctgggctacaggatagaaattccaaagaacgggaagttaagtatccagtcacctttgaat
agtcaggtgcccgcagagccgcccagcactgtccccggcggtggcctcttgctgcattac
tcccaggagaactcgcacaaccacagcgattgcgccgaggagttcaggcaacagcttccc
tacaaagaagacaaatcccaaattcctctggagtcggattccgtagagttcaataacgcc
atcagttacgtgaataagatcaaaacgcgtttcctcgaccatccggaaatttacagatcc
tttttagaaattcttcatacttaccagaaagaacagctgaacacaaaaggccggcctttc
cgaggcatgtcggaggaagaagtgttcactgaagtggcaaatctgttcaggggacaggag
gatctgctgtcggagtttggacagttcctcccggaggccaaaaggtccttgttcacagga
aatggaccatgtgaagtgaacagtgtccagaaaactgagcatgagaagaatctggaacac
agcaagaagcgatccagaccgctgctgctgcggcctgtgtccggcccggcgaagaagaag
atgaagctgcgaggtaccaaagacctgtcagtagcgacagtgggcaagtacggcacgctg
caggagttctccttcttcgacaaggtgcggagggtgctaaagagtcaggaagtctatgaa
aattttctccgttgcattgctctcttcaaccaggagctggtctctggctctgagttgctc
cagctggttacgccgtttttagggaaattcccagaactcttcgcacagttcaagtccttt
cttggtgtgaaagagctttcattcgcttctccgctgagcgaccgatctggggacggaatg
agtcgggaaatcgattacgcttcctgcaaacgcatcggctcgagttaccgggctctgcca
aaaacttaccagcagcccaagtgcagcggaagaacagccatttgcaaggaggtgttaaac
gacacctgggtttcatttccatcctggtctgaagattccacttttgtcagctccaagaag
actccgtacgaggagcagctgcaccgctgtgaagatgagcggtttgagttggatgttgtc
ttggagaccaatttagccacaatccgtgtcctggagagcgtgcagaaaaaactgtctcgc
ctgactcaagaggatcaggagaaattccgcctggacgactgcttgggaggaacatcagaa
gtgatccagcgccgggccatctatcgcatctatggggataaagcaccagagatcatcgaa
agtctaaagaaaaaccccgttactgcagttcctgttgttcttaagaggttgaaagcgaag
gaggaggaatggcgagaggcccagcagggcttcaacaagatctggcgggagcagtacgag
aaagcctacctgaagtccctcgaccaccaggctgtcaacttcaaacagaatgacaccaaa
gctttgcgctccaagagcctgctgaacgaaattgagagcgtctacgatgagcatcaggag
cagcattcagaggggagaagttcatccacaaacgagcctcatcttatctttatctatgaa
gacaagcagattttggaagatgcggcgtctcttgtcagctactatgtcaaacgacagccc
acgatccaaaaggaggatcaagccaccatccggcagatagtgcatcacttcataccggag
ctgtttttctctcagcctcctgagcacaatatttctgaagaatcgacagatgaggacaga
gaaaaccatcagggacagaacctggagactcctgaactgcggaaaaaacacgtgcctggg
cctccgagcagtcccgtggaggccaaagccaccttctgcgatgcgacagcggctgagccc
cacaacgctctggatgatgtttacagtctcttctttgtcaataataattggtatttcttc
ctccgccttcaccagactctctgctcaaggctgctaaagatttatcgtcaagctcaaaag
cagcttctagaatatcggactgaaaaagagagagagaaactcctttgtgagggaagaaaa
gaaaaaaccaatgatccagctatggaactaagactcaagcaaccaagtgaggtggagctg
gaggaatactaccccgccttcctggacatggtgcggagtctgctggacgggaacatcgac
cccacgcagtacgaggacactctgagggagatgttcaccatccacgcctacatcggcttt
actatggacaagctggtgcagaatatcgtccgccagcttcaccacctggtgagcgacgac
atctgcctgaaggtcgtggagctgtacctgagcgagaggaagcacggagccgccggaggg
aacctgtcgtctcgctgcgtgcgcgcggccaaggagaccagctaccagtggaaggctgag
cgctgcatggcagatgagaactgtttcaaggtgatgttccttcagcggaaagggcaggtg
atcatgaccattgagctgctggataccgaagaaacccagacggaggatcccgtggaggtc
cagcacctggcgaactacatggagcagtacgttggggtagaaggagctcccaacaaccag
aacgacggcttcctattgaaacccgtctttctgcaaagaaacctcaaaaagtttcgcaag
tggcagtgtaaacaggtgagagctctgcgcagtgaagtgaagagctcctggaagaggctg
attggggtggaaagcgcctgcaacgtggactgtcggttcaagctcaacacccacaagatg
atgttcatcatgaactcggaggattacatgtaccggcggggagcgctctgccgcgccaag
caggtccagcccatggtgctgctgaagcatcaccagcagtttgaagagtggcacaaccgg
tggctagaggagaacgtgaccatggaggcagttgacgtcgttcaagactggctgatggga
gacgaagacgaggagatggtgccgtgtaaaacaacgtgtgagacggtgaacgtccacggg
gtcccggtgaacaggtacagggttcagtacagtcgccgtccagcttcaccctga
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