Caloenas nicobarica (Nicobar pigeon): 135999152
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Entry
135999152 CDS
T11056
Symbol
OCLN
Name
(RefSeq) occludin isoform X1
KO
K06088
occludin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03272
Virion - Hepatitis viruses
cnic04382
Cornified envelope formation
cnic04514
Cell adhesion molecule (CAM) interaction
cnic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
135999152 (OCLN)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135999152 (OCLN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135999152 (OCLN)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135999152 (OCLN)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cnic01009
]
135999152 (OCLN)
Protein phosphatases and associated proteins [BR:
cnic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135999152 (OCLN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
T3SSipB
Spectrin_Anc-1
Seryl_tRNA_N
WipA_N
TgpA_N
Motif
Other DBs
NCBI-GeneID:
135999152
NCBI-ProteinID:
XP_065508746
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All DBs
Position
27:2331428..2338875
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AA seq
505 aa
AA seq
DB search
MFTKKSYDGPPTGYGPPTGYGPSTGDYGYDYGARSPPPGSYYMEDVPQHFYKWTSPPSVA
RILETVVILLCVAIFACVASTLAWEYGYGYGYGGTFGSGYYGSGYYGSGLNYGYGSYYSG
VTNPRTANGFMMAMAVLCFLAQLGLFVMSVSKSSSSRSRRFYLVVIVVCAVLAFLMLIAS
IVYVVGVNPQAQMTGSYYYSPLLTMCNQIYSSGTYLNQYLYHYCTVDPQEAVAIVCGFLI
VILLCLICFFAHKTRSKIWKYGKPNIYWDKVPVVQEGPNVEEWVKNVADGASVQDETATL
AYSEKPTSPITAPPYSPPSYSYPPQNGYYPAGTYGSRDDQPDRGTSTSPVEEKTREQPRK
PPTRRGRRRRRNPELDESQYETDYTTAVESSDERDQDQWASLYPPIASDGARQKYKQEFD
TDLKRYKQLCAEMDGVNDRINQLSKQLDSISEDSPQYQDVAEEYNRLKDLKRSPDYQTKK
LETKTLRNKLFHIKRMVSDYDKVRG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccaagaagtcctatgacggcccccccacaggctacggcccccccacgggctat
ggcccctccacgggtgattatggctacgactacggtgcccgctcacccccaccgggttct
tactacatggaggacgtgccgcagcacttctacaagtggacgtcgccgcccagcgtggcg
aggatcctggagaccgtggtcatcctgctctgcgttgccatcttcgcctgcgtggcctcc
accctggcctgggagtatggctacggctacggctacggggggactttcggcagcggctac
tacggctctggctactacggcagtgggttgaactacggttacgggagctactacagcggg
gtcaccaacccgcggacggccaacgggttcatgatggccatggccgtgctctgcttcttg
gcccagctggggcttttcgtgatgagcgtcagcaaatccagcagctcccgctcccggcgc
ttctacctggtggtcatcgtggtgtgcgccgtgctggccttcctcatgctcatcgcctcc
atcgtctacgtcgtgggggtcaacccccaggcgcagatgaccggtagttactactacagc
cccttgctgaccatgtgcaaccagatctacagcagcggcacctacctgaaccagtacctg
taccactactgcaccgtggacccccaggaggccgtggccatcgtctgtgggttcctcatc
gtcatcctcctctgcctcatctgcttctttgctcacaagacgcggagcaagatctggaaa
tatgggaaaccaaacatctactgggacaaggtgccggtggtccaggagggtcccaacgtg
gaggagtgggtgaagaacgtggcggacggggccagcgtgcaggatgagacggccacgctc
gcctactcggagaagccgaccagccccatcaccgcgccgccctacagccccccctcctac
agctaccccccccaaaacgggtactaccccgcggggacctacggcagccgggatgaccag
ccggaccgggggaccagcaccagcccggtggaggagaagacgcgggagcagccccgcaaa
ccccccacccgtcgtggccgccggcgccgccgcaaccccgagctggatgagtcgcagtac
gagaccgattacaccacggccgtggagtccagcgacgagcgggaccaggaccagtgggcc
agcctctacccccccattgcctcggacggcgcccgccagaagtacaagcaggagttcgac
acggacctgaagcgctacaagcagctctgtgccgagatggacggcgtcaacgaccgcatc
aaccagctcagcaaacagctcgacagcatctccgaggacagtccccagtaccaggacgtg
gcagaggagtacaaccggctgaaggacctgaagcggagccccgactaccagacgaagaag
ctggagaccaaaaccctgcgcaacaaactcttccacatcaagcggatggtgagcgactat
gacaaggtgcgggggtag
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