Caloenas nicobarica (Nicobar pigeon): 135999287
Help
Entry
135999287 CDS
T11056
Name
(RefSeq) fibrillin-2-like
KO
K23342
fibrillin 2/3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135999287
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cnic00536
]
135999287
Glycosaminoglycan binding proteins [BR:
cnic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135999287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
hEGF
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
Motif
Other DBs
NCBI-GeneID:
135999287
NCBI-ProteinID:
XP_065508930
LinkDB
All DBs
Position
27:complement(4303860..4391450)
Genome browser
AA seq
2873 aa
AA seq
DB search
MGVLWLARFMLGCTAVMYVERAQGQYEGDLHTDRFAGYEERPPANRVRRRGQDSLRGPNV
CGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCANGQLSPNCGSAGVQT
CNVRCMNGGSCNEESCLCQKGYTGTYCGQPVCENGCQNGGRCIGPNRCACVYGFTGPQCE
RDYRTGPCFSQVNNQMCQGQLSGIVCTKTMCCATIGRAWGHPCEMCPAQPHPCRRGFIPN
IRTGACQDVDECQAIPGLCQGGNCINTVGSYECKCPAGHKQSETSHRCEDVDECGAIPGV
CDGGECTNTAGSYVCTCPRGFMTSPDGSRCIDQRIGTCFSALIGGRCAGDLPGQYTKMQC
CCDSGRCWAIAQTPEMCPVRGSDEYRRLCIEGLPVVPGFPGSFPGIPGFGPNGVGPGLNG
PGGIGPNGANGQGGIPGLPGMGPGSSSIGTATLNQTIDICKHFTNLCLNGRCIPTPSSYR
CECNMGYKQDVRGECIDVDECSSSPCVHGDCVNTPGSYHCKCHEGFQSTPTKQACIDIDE
CIMNGVMCRNGRCVNTDGSFQCICNAGFEITPDGKNCVDHDECATTNMCLNGMCINEDGS
FKCICKPGFVLAPNGRYCVDIDECETPGICMNGWCINTEGSFRCECLGGLAIGVDGRVCV
DTHMRSTCYGGIKKGTCARPFPGAVTKSECCCANPDHGFGEPCQPCPAKNSAEFQALCSS
GIGITADGRDINECALNPDICPNGMCENLRGSYRCICNLGYESDPTGKNCVDVDECTVNR
LLCDNGLCRNTPGSYTCTCPKGFVFRTETDTCEDINECTSNPCVNGVCRNNAGSFACECS
PGSKLDPSGTICVDSMKGTCWLNIQDGRCEVNINGATLKSECCATLGAAWGSPCERCEID
TACPRGYARMKGVTCEDVNECEVFPGVCPNGRCVNTAGSFRCECPQGLTLDGTARTCVDV
RMEQCYMKWDEDECTEPLPGKYRIDMCCCSVGSAWGIDCEECPKVGSSEYKAICPRGPGF
ANRGDVLSGRPFYKDVNECKVFPGLCTHGTCRNTIGSFRCLCGNGFALDAEERNCTDIDE
CRISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCMDINECERDPLLCRGGICMNTD
GSFECICPPGHELTSEGNTCVDINECSLSDNLCRNGRCVNVIGTYQCACDSGFQATLDRQ
GCVDIDECTITNGGCDTHCSNSEGSYECSCSEGYALMPDKRSCADIDECEDNPDICDGGQ
CTNIPGEYRCLCFDGFMASLDMKTCIDVNECDLNPNICLHGECENTKGSFICHCQLGYFV
KKGTTGCTDIDECEIGAHNCDMHASCINVPGSFKCKCRTGWLGDGLKCNDLDECATEEHK
CNLNANCVNTPGSYRCACREGFNGDGFSCSDVDECADNVNLCENGQCLNAPGGYRCECEM
GFNPTEDSKACQDIDECTFQNICVFGTCQNLPGMFRCACDDGYELDRSGGNCTDINECAD
PVNCINGLCVNTPGSYLCNCPQDFELNPTGVGCVDTRVGNCFLDTQDRGDGGISCSAEIG
VGVTRASCCCSLGRAWGNPCELCPPANTTEYKTLCPGGEGFRPNPITVILEDIDECQELP
GLCQGGNCVNTFGSFQCECPLGYYLNEDTRICEDIDECSAHIGICGPGTCYNTLGNYTCV
CPPEYMQVNGGNNCMDMRKSVCYRNYNDTCENELSFNMTKKMCCCSYNIGKAWNKPCEPC
PTPASPEYQILCGNQAPGFIIDIHTGKPIDIDECSEIPAICTNGVCINQIGSFRCECPIG
FSYNNILLICEDIDECSNGENLCQRNADCINIPGSYRCECSTGYKLSPSGACVGRNECQE
IPNVCSHGDCVDTEGSYVCICHNGFKATGEQTMCMDIDECDRQPCGNGTCKNTVGSYNCL
CFPGFELTHNNDCMDIDECSSLVGQVCRNGQCINSIGSFQCLCQEGYDRTPDGKNCIDIN
ECVSLPGTCSPGTCQNLEGSFRCICPPGYEVQNDNCIDINECEEEPNICLFGTCTNTPGS
FQCVCPPGFVLSDNGRRCFDTRQSFCFTRFDNGKCSVPKAFNTTKARCCCSKMPGEGWGD
PCELCPQEGNVAFQELCPYGHGAIPGPGDTREDVNECSENLGVCINGACINTDGSFRCEC
PFGYNLDYTGVNCVDTDECSIGNPCGNGTCTNVVGGFECACDEGFEPGPMMTCEDINECA
LNPLLCAFRCINTFGSYECTCPSGYALREDRRMCRDLDECAEGLHDCESRGMLCKNLIGT
FMCICPPGMQRRPDGEGCTDENECRTKPGICPNGRCINTMGSYRCDCNEGFEVSPSGTEC
IDTRQGFCFTEVLQTMCQMSSTNRNLVTKSECCCNSGRSWGPQCELCPLPGTAQYKKMCP
HGPGYSTDGRDIDECKVLPNLCKNGQCINSIGSFRCHCRLGYTADITGTACVDLDECNQS
PKPCNFICKNTEGSYQCSCPRGYILQEDGKICKDLDECSTKQHNCQFLCVNIIGGFNCKC
PPGFTQHHSSCIDNNECTAQPSLCGAKGQCLNTPGSYNCECQKGFSLDSSGVNCEDVDEC
DGNHRCQHGCQNVLGGYRCGCPQGYVQHYQWNQCVDENECSSPTACGSASCYNTLGSFKC
VCPSGFDFDQAFGGCQDVDECSAGGSPCSYGCSNTDGGYLCGCPGGYFRAGQGHCISGLG
FGKGSYLPAPQEEDEDNLLSPETCYECKINGYPKRGRQRRSINGTEKHQDHTVNLASMDV
DAPLSMTLNLSDLAHKEHILELLPAVEPLENRVRYLISQGNDDGYFRIHQKEGLSYLHLG
RKKILPGTYLLEIVSVPLYRKRELQKLEAKNHLNYLAGELGQALRMKLQLQLY
NT seq
8622 nt
NT seq
+upstream
nt +downstream
nt
atgggggtattgtggctggccaggttcatgctgggatgtacagcagttatgtatgtggaa
cgagcccagggtcaatatgaaggggacttgcatactgacagatttgcaggctacgaggaa
agaccgccagcaaacagagtgagaagaagaggccaagacagtttacgaggccccaatgtc
tgtggttcgaggttccactcctactgctgccccggttggaaaacgctgcccggagggaac
cagtgcattgtcccaatttgcaggaattcttgtggcgatgggttttgttcacggccaaac
atgtgtacgtgcgccaatggacaactgtctcccaactgcggctcagctggagtccaaacc
tgcaacgtgaggtgcatgaacggtgggagctgcaacgaggagtcgtgtctctgccagaag
ggctacactggaacgtactgtgggcagcctgtctgtgagaacggctgtcagaacggaggt
cgatgcattgggccaaaccgttgtgcttgtgtctatggattcaccggtccgcagtgcgag
cgagactaccgtaccggtccctgctttagccaagtcaataaccagatgtgccagggccaa
ctcagcgggatcgtctgtaccaagaccatgtgttgtgccaccattggacgggcctggggt
cacccgtgcgagatgtgccctgcccaacctcacccctgccgccgaggtttcatccccaac
atccgtactggagcctgccaagatgtggatgaatgtcaagccattcctggcctctgccaa
ggtggcaactgcatcaacacggtgggttcttacgagtgcaaatgccccgcgggacacaag
cagagcgagaccagccacagatgtgaagatgtggatgagtgtggtgcgatccccggtgtg
tgtgacggcggcgagtgcaccaacaccgcaggcagctacgtgtgcacgtgtccacgtgga
ttcatgaccagccccgatggatcacgctgcattgaccagcggatcgggacgtgtttctca
gctctgatcggcgggcgctgcgccggggacctccccggccagtacaccaagatgcagtgc
tgctgcgactccgggcgctgctgggccatcgctcagactccggagatgtgtcctgtccgc
ggctctgatgagtaccgcaggctttgcatcgaaggactcccagtcgtgccagggttccct
gggagctttccaggaattcctggattcgggcccaatggtgttgggccgggactcaacggg
cctggaggcatcggaccaaatggggcaaatggacaaggcgggatcccaggtctccctgga
atgggcccaggaagttcaagcattggaaccgccactttgaatcagaccatcgacatctgc
aagcacttcactaacctctgcttgaacggacgctgcatccccaccccgtccagctaccgc
tgcgagtgcaacatgggctacaagcaggatgtgcgcggagagtgcattgatgtggatgaa
tgctccagcagcccctgtgtgcatggtgactgcgtgaacacccccggctcctaccactgc
aagtgccacgaaggcttccagagcacccccacgaagcaggcgtgcatcgatattgatgag
tgcatcatgaacggagtgatgtgcaggaacggccgctgtgttaacaccgatggcagcttc
cagtgtatctgcaacgctggctttgaaatcacccccgatggcaagaactgcgttgatcat
gacgaatgtgccaccaccaacatgtgcctcaatgggatgtgcatcaatgaggacggcagc
ttcaaatgtatctgcaagcccggctttgtgctggctcccaatgggcggtactgtgtcgac
attgatgagtgcgagacgccgggaatctgcatgaacggctggtgcattaacaccgagggc
tccttccgctgcgagtgcctggggggcctggcaatcggggtggatggacgggtctgcgtg
gacacccacatgcgcagcacctgttacggaggcattaaaaagggcacatgcgctcgtccc
ttcccaggagccgtcaccaagtcggagtgctgctgcgctaacccagaccatggcttcgga
gagccctgccagccctgtccggccaaaaactctgctgaattccaggctctctgcagcagt
ggcattggaataacagctgatggcagagacatcaacgaatgtgccctcaatccagacatc
tgccccaatggcatgtgcgagaacctgcgtgggagctaccgctgtatctgcaacctgggc
tacgagtcagatcccacgggcaagaactgcgtggacgttgatgaatgcaccgtcaaccgt
ttgctgtgtgacaatggactgtgccgcaacacacccggcagctacacctgcacctgcccc
aagggctttgtcttcaggacggagacagatacctgtgaagatatcaatgagtgcacctct
aacccttgtgtgaatggcgtctgcaggaacaatgctggctcctttgcttgcgagtgctcc
ccaggcagcaagctggaccccagtggcaccatctgcgtggacagcatgaaagggacgtgc
tggctgaacatccaggatggacgttgcgaggtgaacatcaacggggccacactgaaatcc
gagtgctgtgccacactgggggctgcgtggggcagcccctgcgagcgctgcgagatcgat
actgcctgtccccgaggatatgctaggatgaagggggtgacgtgtgaagatgtgaacgag
tgcgaggtcttccctggcgtctgccctaatggacgctgtgtgaacacggccggctccttc
cgctgcgagtgtccgcaaggactgacccttgatggcactgccaggacatgtgtggacgtg
cgcatggagcagtgctacatgaagtgggatgaagacgagtgcacggagcctctgccgggc
aagtaccggatcgacatgtgctgctgctccgtgggctccgcctggggcatcgattgtgaa
gaatgtcccaaggttggctccagtgagtacaaagccatctgcccgaggggacccggcttt
gccaaccgaggagatgtgctatcaggaagacccttctacaaagatgtgaacgaatgtaaa
gtcttccctggcctgtgcactcatgggacttgtcgaaacaccattggcagcttcaggtgt
ctctgtggcaatggctttgctttggatgcggaggaaaggaactgcacagacatcgacgag
tgccgcatctcgccggacctctgtggccacggcacctgtgtcaacacaccgggcagcttc
gagtgcgagtgcttcgaaggctacgagagcggcttcatgatgatgaagaactgcatggat
atcaacgagtgtgagcgggacccgctgctgtgccgaggtgggatctgcatgaacacagat
ggcagctttgaatgcatctgcccccctggccacgagctgacgtctgaagggaacacttgc
gtagatatcaacgagtgctcccttagtgacaacctctgtcgcaacggccgctgcgtcaac
gtcatcggtacctaccagtgtgcctgtgattcgggcttccaggccacactggaccggcaa
ggctgtgtcgacatcgacgagtgcaccataaccaacggcggctgtgacacgcattgctcc
aactcggagggcagctacgaatgcagctgcagcgaaggttacgcattgatgccggacaag
agatcgtgtgcagatattgatgaatgtgaggataatccagacatctgtgatggcgggcag
tgcaccaacatccccggggagtaccgctgcctctgcttcgatggtttcatggcatccctg
gacatgaagacctgtatcgatgtgaatgaatgcgatctcaacccaaacatctgcctgcac
ggcgagtgtgaaaacacaaagggttccttcatctgtcactgccagctgggctacttcgtc
aagaagggaaccacgggctgcacagatatcgacgaatgtgagattggggctcacaactgt
gacatgcacgcctcctgcatcaatgtgcccgggagcttcaaatgcaagtgtcggacaggc
tggcttggggacgggctgaagtgcaacgatctggacgaatgtgcaactgaagagcataag
tgcaacctcaatgccaactgcgtcaacacaccaggctcctaccgctgtgcctgccgagag
ggcttcaacggggacggcttctcctgctcagatgtggatgagtgtgcggacaacgtgaac
ctgtgtgagaatggacaatgtctcaatgcgcctgggggttaccgctgtgagtgtgagatg
ggcttcaaccccacagaggacagcaaggcctgccaggacattgatgaatgcaccttccag
aacatctgtgtctttgggacctgccagaacctgcctgggatgttccgctgtgcctgcgat
gatggttatgaactggacaggagcggaggcaactgcacagacatcaacgaatgcgcagac
cccgtgaactgtatcaatggcctgtgtgtcaacaccccaggcagctacctgtgcaactgt
cctcaggactttgagctgaaccccaccggtgtgggctgtgtggatacccgcgttgggaac
tgcttcttggacacccaggatcgaggagacggggggatctcctgcagcgcagaaattgga
gttggggtcactcgggcatcctgctgctgctcactgggtcgtgcatggggcaacccctgc
gagctttgtcctcctgccaacacgaccgagtacaagaccttgtgccccggaggagaaggt
ttccggcccaaccccatcactgtcatcctggaagatatcgatgagtgccaggagctgccg
ggactctgccagggtggcaactgcgtcaacacttttggcagcttccagtgcgagtgtccc
cttggctactacctcaacgaggacacgcgcatctgtgaagatatcgatgagtgctctgct
cacattgggatctgtggccctgggacctgctacaacaccctcggcaactacacctgcgtg
tgcccccccgagtacatgcaagtcaatggaggaaacaactgcatggacatgaggaagagt
gtgtgctatcgcaactacaatgacacatgtgagaacgagctgtccttcaacatgaccaag
aagatgtgctgctgctcctacaacattggcaaggcctggaacaagccctgtgagccctgt
cccacgccagcgagccccgagtaccagatcctgtgcgggaaccaggcccccggcttcatc
atcgacatccacacagggaagcccatcgatattgatgagtgcagcgagatccccgccatc
tgcaccaacggtgtctgcatcaaccaaatcggcagcttcaggtgtgagtgtcccattgga
ttcagctacaacaacatcctgctcatctgtgaagacatcgacgagtgcagcaatggggag
aacctatgtcagcgcaacgccgactgcatcaacatcccgggcagttacaggtgcgaatgc
tccactggatacaagctgtcgcccagcggagcctgcgtgggtcgcaatgaatgccaggag
atccccaacgtctgcagccacggcgactgcgttgacaccgagggcagctatgtatgcatc
tgccacaatggcttcaaggccacgggggagcagaccatgtgcatggatatcgatgagtgt
gaccgacagccctgcgggaatgggacctgcaagaacacggtcggctcctacaactgcctc
tgcttcccaggctttgagctcacacacaacaacgactgcatggacattgatgaatgttca
tccctggtggggcaggtgtgtcggaacggccagtgcatcaacagcatcggctccttccag
tgcctgtgccaagaggggtatgaccggacccctgatgggaagaattgtatagacatcaat
gagtgtgtaagcctgcctgggacctgctccccgggcacctgccagaacctggagggttcc
ttccgctgtatctgccctcctgggtacgaggtgcagaatgacaactgcatcgatatcaac
gaatgtgaagaggagccaaacatctgcctcttcgggacatgcaccaatacccccggcagc
ttccagtgcgtctgccctccaggctttgtgctgtctgataatggccgacggtgcttcgat
actcgccagagcttctgcttcactcgcttcgacaacgggaagtgctctgtccccaaggcc
ttcaacaccaccaaggctcggtgttgctgcagcaagatgccaggagaaggctggggagat
ccctgtgagctgtgcccacaggaggggaatgttgctttccaggagctgtgtccatatggc
cacggagccatcccaggcccaggtgacacccgagaagatgttaatgaatgctcagagaac
ctgggtgtctgcataaacggagcctgcattaacaccgatgggtccttccgctgcgagtgc
cccttcggctacaacctggactacaccggcgtcaactgcgtggataccgacgagtgctcc
atcggcaacccgtgtgggaacggcacctgcaccaatgtggtgggaggctttgagtgcgcc
tgcgacgagggctttgagccagggcccatgatgacatgtgaagatatcaacgagtgtgca
ctgaatcccctgctctgtgccttccgctgcatcaacacctttggctcctacgagtgcacc
tgcccctctggatatgccctccgagaagacagaagaatgtgcagagatctggatgagtgt
gcagaaggactgcacgactgcgagtctcgagggatgctgtgcaagaacctcatcggcacc
ttcatgtgtatctgccccccaggaatgcagcgcaggcctgatggagagggctgcacagat
gagaacgagtgtcgcaccaagcctggaatctgccccaacggccgctgcatcaacacgatg
ggaagttaccgctgtgactgcaacgaaggttttgaagtcagtccctctggcacagagtgt
attgacacgcgccagggattctgcttcaccgaagtgctgcaaaccatgtgccagatgtcc
tccaccaaccgcaacctggtcaccaaatccgagtgctgctgcaacagcgggcgcagctgg
ggccctcagtgtgagctgtgtcccctccctggaactgcccagtacaagaaaatgtgtcct
catgggccagggtactccacagatgggagagacatcgacgagtgcaaggtgctgcccaac
ctctgcaagaacggccagtgcatcaacagcatcggctccttccgctgccactgccggctg
ggctacactgcggacatcacgggcacggcctgcgtggatttggatgagtgtaaccagtcc
cctaagccttgtaacttcatctgcaagaacacagaaggcagctaccaatgctcctgcccc
cgagggtacattctgcaagaagatgggaagatctgcaaagatttggatgaatgttccacc
aagcagcacaactgccagttcctctgtgtgaacattattggaggattcaactgcaaatgc
cctccaggcttcactcagcaccactcgtcctgcatcgacaataacgagtgcacagctcag
ccgtctctgtgtggagccaaaggacagtgtctgaacacgccgggcagctacaactgcgag
tgtcagaaaggattctccctggacagctctggtgtcaactgtgaagatgtggacgagtgc
gatggaaaccatcggtgccagcacggctgccagaacgtgctcgggggctaccgctgcggc
tgtccgcagggctacgtgcagcattaccagtggaaccagtgtgtggatgaaaacgagtgc
tccagccccacggcctgcggctctgcctcctgctacaacactctggggagtttcaagtgt
gtctgtccatctggctttgattttgaccaagcctttggtgggtgtcaggatgtggacgaa
tgctcagctggtggcagcccctgcagttacggctgctccaacacagacggcggttatctc
tgcggctgccctgggggctacttccgagcaggacaaggacactgtatttctggcttgggt
tttgggaaaggctcctaccttcctgccccgcaagaagaggatgaagacaacctgctctcc
cctgaaacctgctacgagtgcaagataaacggctatcccaagagaggtcggcagcgacgc
agcatcaacggcactgagaagcaccaggatcacaccgtgaacttggccagcatggatgtg
gatgctcctctgtccatgacgctgaacctctctgacctggctcacaaggagcacatcctg
gagctcctgccggctgtggagcccctggagaaccgcgtgcggtacctcatctcccagggg
aatgacgatggctatttccgcatccaccaaaaagaggggctcagctacctgcacctcggc
cgcaagaaaatcctgcctggcacctacctgctggaaattgtcagcgtgcccctgtaccgc
aagagggaactgcagaaactcgaggccaagaaccacctcaactacttagcaggggagctg
ggccaagcactgaggatgaagctccagctccagctctactaa
DBGET
integrated database retrieval system
