Caloenas nicobarica (Nicobar pigeon): 135999569
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Entry
135999569 CDS
T11056
Symbol
DDX47
Name
(RefSeq) probable ATP-dependent RNA helicase DDX47
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnic03009
]
135999569 (DDX47)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
135999569 (DDX47)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135999569 (DDX47)
Ribosome biogenesis [BR:
cnic03009
]
Eukaryotic type
90S particles
Helicases
135999569 (DDX47)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135999569 (DDX47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Helicase_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
135999569
NCBI-ProteinID:
XP_065509208
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All DBs
Position
1:complement(43144623..43152297)
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AA seq
448 aa
AA seq
DB search
MAAGEENGQAAEPEAAAEEPRSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRD
IIGLAETGSGKTGAFALPILQALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVHT
TVIVGGIDAMSQSLALAKKPHVIIATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMD
FETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI
FIPSKFKDSYLVHILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRL
GALNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKS
ITFVTQYDVELFQRIEHLIGKKLPAFPMQEEEVMMLTERVAEAQRLARMELREQGEKKRS
RNDDDDTEEAIGVRNKVAGGKKKKRKAF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggagaagagaacgggcaggcggcggagccggaggcagcggcggaagagcct
cggagcttcaaggacctgggagtgacagatgtcctgtgtgaagcttgtgaccagttagga
tggaaggtcccaacaaagatccaagtcgaggctattccagtggctctccaaggcagagat
attattggactggcagaaactggctctggaaaaacaggagcctttgctttgccaattctt
caagcactgctggaaacccctcagcgattatttgctctcgtcctcacaccaacaagggag
ctggccttccaaatctcagagcagtttgaagctcttggatcctccattggtgtccacact
acggttattgtgggtggaatagatgcgatgtctcaatctctggccttagccaagaaacca
cacgttataattgcaacccctggacgtctagttgatcatctggagaacacaaagggattc
aacttacgagctctgaagtacctagtgatggatgaggctgaccggatccttaacatggat
tttgagacagaggtggataagatattaaaagtgattcctcgagacaggaagacattcctg
ttttctgccaccatgaccaagaaggttcaaaaactccagcgtgctgctctgaagaatcct
gttaaatgtgctgtttcttccaaatatcagacagttgaaaaactacagcagtactacatt
ttcatcccctccaaattcaaggacagctacctggttcatatcttgaatgaattagccgga
aactctttcatgatattctgtagtacgtgtaacaatacccagaggactgctctgctgctt
cgcaacctggggttcactgccattcctctccatgggcagatgagtcagaataaacgcttg
ggcgctctaaacaagttcaaggcaaaggcacgttctattctactggctactgatgttgca
agcagaggtctggacatcccacatgtagatgtggtgataaactttgatattcctacgcat
tctaaggattacattcatcgtgttgggagaacagctcgagctgggagatctggcaaatct
atcacctttgtcacacagtacgacgtagagctgttccagcgcattgaacacctgattggc
aagaagctgccagcattccccatgcaagaggaagaagttatgatgctgacagagcgtgtg
gctgaggcccagagacttgctcgaatggagctgcgggagcaaggagagaagaagcgatct
cggaatgatgatgatgacacagaagaagctattggtgtcaggaataaagtggcaggtggg
aaaaagaagaagaggaaagccttctag
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