Caloenas nicobarica (Nicobar pigeon): 135999638
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Entry
135999638 CDS
T11056
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03083
Polycomb repressive complex
cnic04980
Cobalamin transport and metabolism
cnic05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135999638
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
135999638
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135999638
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cnic01009
]
135999638
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135999638
03029 Mitochondrial biogenesis [BR:
cnic03029
]
135999638
Protein phosphatases and associated proteins [BR:
cnic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135999638
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
135999638
HMT complexes
COMPASS/SET1 complex
135999638
MLL-HCF complex
135999638
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
135999638
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135999638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
Tugs
Motif
Other DBs
NCBI-GeneID:
135999638
NCBI-ProteinID:
XP_065509270
LinkDB
All DBs
Position
29:345073..369959
Genome browser
AA seq
2071 aa
AA seq
DB search
MAGAGGSSPPRAAPPALQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDE
LHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRW
EWKRLKAKTPRNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYVLEL
RAGSGVVSWDIPITYGVLPPPRESHTAVVYTERDSRRSRLVIYGGMSGCRLGDLWTLDIE
TLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLAC
LNLDSMSWEPLVLETLEDAVPRARAGHCAVAIATRLYIWSGRDGYRKAWNNQVCCKDLWY
LETERPPAPGRVQLVRANTASLEVSWGPVPTADSYLLQLQKYELPAAPAPPPVPSVPANP
PRSPAPAAPAPPPPLPAPPAAGLTLLPAAPPPAAAATGAPAGTAAPAPAAPGVQVLPAGP
PAAVTVTAAGAIAGATARAAGVPAVLKVTCPPAAAAGPPLVTVRSAGTPGKAPVTVTSLP
AGVRMVVPSQSPQGTVMGSSPQMSGMAALAAAAAATQKIPPASGATVLSVPAGATIVKTV
SPGVTSSLPAAVKVASAPVMVSNPATRMLKTAAAQVGGAGGASPATNTPTRPIITVHKSG
TVTVAQQAQVMTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVQTKPGQGSGVTGP
AATGPVTQIIQTKGPLPAGTILKLVTSGEGKPTTILTSTQAGGGAGGAKPPPTLLGISSV
APGTTKPGTTTIIKTIPVSAILTQAGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIIT
AVPKLATGHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTTLVVKG
TTGVTTLGTVTGTVSTSLAGGTAGGPSASASLATPITTLGTIATLSSQVLNPAAITVSAP
AGALGTPALTVQPVSQPTQVTLITTPGGVEPQPVPDLPVSILASPTSEQPGGAPPAPPPE
PGPAEGGTGGTVTLLCSNPPCETHETGTTNTATGARGGDRPCPTRQTVVTGTTMTPRLCP
GPPRDPPPVAVVPSPAVTSPWASPGDNGDDPPGEGPAVALGPAACANPPCETHETGTTST
VTTAGARSCSNPPCETHETGTTNTVTTASSSCSNPPCETHETGTTNTVTTAGSRSCSNPP
CETHETGTTNTVTTASSSCSNPPCETHETGTTNTVTTASSSCSNPPRETHETRTTNTATT
TMAVGSSSCSNPPCETHETGTTSTVTTASSSRSNPPCETHETGTTNAATTTVAVGSRSCS
NPRVRPTRGTTSTVTTASSSCSNPPCETHETGTTNTATTTVAVGSRSCSNPPCETHETGT
TNTVTTAGASSCSNPPCETHETGTTNTVTTASSLCSNPPCETHETGTTNTVTTASSSCSN
PPCETHETGTTNTVTTASSSCSNPPCETHETGTTNTVTTASSSCSNPPCETHETGTPNAA
TAAAGSSSSSNPPHETGATAAVTPGSSSCSNPPCETHETGTTNTPTTTTGRVKFKPRSRG
GGGHRVPPPADRDPPRGAPAPGDPPSCSNPPCETHETGTTPTATTVTSSMGTHAEPPPAA
NGQGEPPVPPPAEGTPPGVAPQPRAVTTVTQSTPVPGPAVPSISSLTDPPPPPPPDPPGT
PTPPRRRRRRPRPPPRRAPPPWPPPAPPRPCRGGAAPRAPRGPGGGAGAAPRAGRGPPGA
GRAPPGLGLTPEELAVTAAAEAAAAAATEEAQAQAQALAIQAVLQAAQQAVMGTGTRGTW
GRGGGHGGNGDMGDTGTLGTLGCWGHWGHGAQAPAIQAMLQAAQQAVMGTGTRGDVAGDM
GTLGCWGHGAQAPAMQAVLQAAQQAVMDDRRLSDYNIGPSARINLVLKPKLGDPPKAGDP
PQGLGDPPVGFGDPGTPPLGFGGALGRVLGRHLGAQEAQALLGQLSRDYALGLRGLSLDD
VERMGTRLLLGGPAHSGAGPAHSDTGSAHNGAGPAHPGADPRPQRRRARPQRHRPRPQRR
RPRPPRGWPRPRRPWPRPLKPRPRPLPPISQ
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgcggggggctcgtcccccccccgggcggccccccccgcgctgcagccgcgc
tggaagcgggtggtgggctggtcggggcccgtcccccggccccggcacggccaccgcgcc
gtggccatcaaggagctcatcgtggtgttcggcggcggcaacgagggcatcgtggacgag
ctgcacgtctacaacaccgccaccaaccagtggttcatcccggccgtgcggggcgacatc
ccccccggctgcgccgcctacggcttcgtgtgcgacgggacgcggctgctggtgttcggg
ggcatggtggagtacggcaagtacagcaacgacctctacgagctgcaggccagccggtgg
gagtggaagcgtctgaaggcgaagaccccccggaacgggccccccccctgcccccgcctg
ggccacagcttctccttggtgggcaacaagtgctacctgttcggggggctggcgaacgac
agcgaggaccccaagaacaacatccccaggtacctgaacgacctgtacgtgctggagctg
cgcgcgggctcgggggtggtgtcgtgggacatccccatcacgtacggggtgctgcccccg
ccccgcgagagccacacggccgtggtttacacggagcgcgactcgcgccgctcgcgcctc
gtcatctacggcgggatgagcggctgccgcctgggcgacctctggacgctggatatcgag
acgctgacgtggaacaagcccagcctgagcggggtggcccccctgccgcgcagcctgcac
tcggccaccaccatcggcaataagatgtacgtgttcggggggtgggtccccctggtcatg
gacgacgtgaaggtggcgacgcacgagaaggagtggaagtgcacgaacacgctggcctgt
ctgaacctggactcgatgtcgtgggaaccgctggtgctggagacgctggaggacgcggtt
ccgcgggcgcgcgccggtcactgcgccgtggccatcgccacgcggctctacatctggagc
gggcgcgacggctaccgcaaggcctggaacaaccaggtgtgctgcaaggacctgtggtac
ctggagacagagcggccccccgcccccgggcgcgtgcagctggtgcgcgccaacacggcg
tcgctggaggtgagctgggggccggtgcccacggccgactcgtacctgctgcagctgcag
aagtacgagctgcccgccgcccccgcgccccccccggtgccctcggtccccgccaacccc
ccccgcagccccgcgcccgccgcccccgcgccccccccgccgctgcccgcgccccccgcc
gcggggctcacgctgctgccggccgcccccccgcccgccgccgccgccaccggcgccccc
gccggcaccgccgcccccgccccggcagcgcccggggtgcaggtgctgcccgccgggccc
cccgccgccgtcaccgtcaccgccgccggggccatcgcgggggccaccgcacgcgctgcc
ggcgtccctgcggtgctgaaggtgacgtgtccccccgcggcggccgccggcccccccctg
gtgacggttcgctcggccgggacccccggcaaggccccggtgacggtgacgtccctgccg
gccggcgtgcgcatggtggtgcccagccagagcccccagggcacggtgatgggcagcagc
ccccagatgagcggcatggccgccttggccgccgcggccgcggccacgcagaagatcccg
ccggcctcgggcgccaccgtgctcagcgtccccgccggcgccaccatcgtcaagaccgtg
tcccccggcgtcacctcctccctgcccgccgccgtcaaggtggcctcggcgcccgtcatg
gtcagtaacccggccacgcggatgctgaagacggcggctgcgcaggtcgggggggccggg
ggggcgtcccccgccaccaacacccccacgcggcccatcatcacggtgcacaagtcgggg
acggtgacggtggcgcagcaggcgcaggtcatgaccaccgtggtggggggcgtcaccaaa
accatcacgctggtcaagagccccatctcggtgccggggggcagcgccctgatttccaac
ctggggaaggtgatgtcggttcagaccaaacccgggcagggctccggtgtcaccggccct
gcggccaccggccccgtcacccagatcatccagaccaagggccccctcccggcgggcacg
atcctgaagctggtgacgtcgggggaggggaagccgacgaccatcctgaccagcacccag
gccggggggggcgcggggggcgccaaaccgccccccaccctgctgggcatcagcagcgtc
gcccccggcaccaccaaacccggcaccaccaccatcatcaaaaccatccccgtctctgcc
atcctcacccaggccggggccaccggcgtcaccagcagccccggcatcaagtcgcccatc
accatcatcaccaccaaggtgatgacgtcgggcaccggcgcccccgccaagatcatcacg
gccgtccccaaactggccacgggccacgggcagcagggggtgacacaggtggtgctgaag
ggcgccccggggcagccggggaccatcctgcgcacggtgcccatgggcggcgtgcggctg
gtgacgccggtcaccgtctcggccgtcaagcccacggtcaccacgctggtggtcaagggc
accacaggtgtgaccacgctggggacggtgacggggacggtgtccaccagcctggcgggg
ggcacggccgggggtcccagcgcctcggcctcgctcgccacccccatcaccaccctgggg
accatcgccaccctgtccagccaggtcctcaaccccgccgccatcaccgtgtccgcgccc
gccggcgccctggggacgcccgcgctcaccgtgcagccggtgtcccagcccacgcaggtg
actctgatcacgacgccggggggggtggagccccagcccgtccccgacctgcccgtgtcc
atcctggcgtcccccaccagcgaacagcccgggggggccccccccgcgcccccccccgag
cccggcccggccgagggcggcaccggcggcactgtcaccctcctgtgctccaaccccccc
tgcgagacccacgagaccggaaccaccaacacggccacgggcgcccggggtggggaccgg
ccctgccccacgcgccagaccgtggtcaccggcaccaccatgaccccccggctgtgcccg
gggcccccccgcgaccctcccccggtggccgtcgtcccctccccggcggtgacgtcgccc
tgggcgtcccccggcgacaacggcgacgacccccccggcgaggggccggcggtggccctg
gggccggcggcctgtgccaaccccccctgcgagacgcacgagacggggacgacgagcacg
gtgacgaccgcgggggcaaggtcgtgctcgaaccccccctgcgagacgcacgagaccgga
accaccaacacggtgaccacggcgtcaagttcgtgctcgaaccccccctgcgagacgcac
gagacgggaaccaccaacacggtgacgaccgcggggtcaaggtcatgttcgaaccccccc
tgcgagacgcacgagaccggaaccaccaacacggtgaccacggcgtcaagttcatgttca
aaccccccctgcgagacgcacgagaccggaaccaccaacacggtgaccacggcgtcaagt
tcatgttcgaaccccccacgtgagacccacgagaccaggacgaccaacacggcgacaacc
accatggccgtggggtcaagttcgtgttcgaaccctccgtgtgagacgcatgagaccggg
acaaccagcacggtgacgacggcgtcaagttcacgttcaaaccccccgtgcgagacgcac
gagacgggaacaaccaacgcggcgacaaccaccgtggccgtggggtcaaggtcgtgttcg
aacccccgtgtgagacccacgagagggacgaccagcacggtgacgacggcgtcaagttcg
tgttcaaacccgccgtgtgagacgcacgagacgggaacaaccaacacggcgacaaccacc
gtggccgtggggtcaaggtcgtgttcgaaccctccgtgtgagacgcacgagacgggaacc
accaacactgtgacgaccgcgggggcaagttcgtgttccaaccctccctgtgagacgcac
gagaccggaaccaccaacacggtgactacggcgtcaagtttgtgttcaaaccccccgtgc
gagacccacgagacgggaaccaccaacacggtgaccacggcgtcaagttcgtgttccaac
cccccgtgcgagacccacgagacgggaaccaccaacacggtgactacggcgtcaagttcg
tgttcaaaccccccgtgcgagacccacgagacgggaaccaccaacacggtgactacggcg
tcaagttcgtgttcaaaccccccgtgcgagacccacgagacgggaacccccaacgcggcg
acggcagccgcggggtcaagctcaagttcaaaccccccccacgagaccggggcgaccgcc
gcggtgaccccggggtcaagttcatgttccaaccccccctgcgagacccacgagacggga
accaccaacacccccacgaccaccacgggccgggtcaagttcaaaccccgctcccgaggc
ggcggcggccaccgcgtccccccccccgccgaccgggacccccccaggggcgcccccgcc
ccaggagacccccccagctgctccaaccccccctgcgagacccatgagacggggacgacg
cccacggccaccacggtcacctccagcatgggcacccacgcagagccccccccggcggcc
aacgggcagggggagcccccggtgccccccccggcggaggggacgccccccggggtcgcc
ccccagccccgcgctgtcaccaccgtcacccagtccacaccggtgccgggacccgccgtg
ccgagcatctcgtcgctgaccgacccccccccgccgcccccccccgaccccccggggacc
ccgacccccccgcgccgccgacgccgccgcccgcgccccccaccccgccgggcgcccccg
ccatggccgcccccggctcccccgaggccttgccgtggtggtgctgccccccgcgccccc
cgcggcccagggggaggcgctggggctgccccccgagctggccggggcccccccggggct
ggccgggcccccccggggctggggctgacccccgaggagctggcggtcacggcggcggcc
gaggccgcggctgcggcggccaccgaggaggcgcaggcccaggcgcaggccctggccatc
caggccgtgctgcaggccgcgcagcaggccgtcatgggtacggggacacgggggacgtgg
ggacgtggggggggacatgggggcaatggggacatgggggacacggggacattggggaca
ctggggtgctggggacactggggacatggggcgcaggccccggccatccaggccatgctg
caggccgcgcagcaggccgtcatgggtacggggacacggggggatgtggcgggggacatg
gggacactggggtgctggggacatggggcgcaggccccagccatgcaggccgtgctgcag
gccgcgcagcaggccgtcatggacgatcggcgactcagcgattacaacatcggcccctcg
gccagaatcaatttggtgctgaagccgaaactcggggacccccccaaagctggggacccc
ccccagggcctcggggacccccccgtgggctttggggaccccgggaccccccccctgggt
tttgggggggccctggggagggtcctggggagacatttgggggcgcaggaggcgcaggcg
ctgctggggcagctcagcagggattacgcgctggggctgcgggggctcagtctggacgac
gtggagcgaatggggacgcggctgctgctgggaggccccgcccacagcggcgctggcccc
gcccacagcgacacaggctccgcccacaacggcgccgggcccgcccaccccggggctgac
ccccgcccacaacggcgccgggcccgcccacagcgacacaggccccgcccacaacggcgc
cggccccgcccaccccggggctggccccgcccccgccgcccctggccacgccccctaaag
ccccggccacgccccctccccccaatctcgcagtaa
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