Caloenas nicobarica (Nicobar pigeon): 135999776
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Entry
135999776 CDS
T11056
Symbol
TBC1D25
Name
(RefSeq) TBC1 domain family member 25
KO
K24799
TBC1 domain family member 25
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135999776 (TBC1D25)
Membrane trafficking [BR:
cnic04131
]
Others
Specific organelles associated proteins
Auto phagosome
135999776 (TBC1D25)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PB1
Motif
Other DBs
NCBI-GeneID:
135999776
NCBI-ProteinID:
XP_065509422
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All DBs
Position
29:complement(168693..176601)
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AA seq
1112 aa
AA seq
DB search
MAAAGGGVCAGGGAGLEEECEVVRVRVKKSEGPLPPEFRSFAVDPQITSLDVLQHILARA
FDLQGKKSFSVSFATRDPQGQETFVPLLSDGDLAAAFTCARPTLRLRMDVRPPAESPLLE
DWDIISPREVAAAEPLPERRSLLAAALPFTQALLAQVGRTLARAQAALSWPEGSPPSPPP
PPCAPLSDADLRTYLGPGGRLLRPHDLRLHVYHGGVEPGLRKVVWRYLLNVFPAGLSGQE
RLSHLRLKAAEYAALKTALAARAAPAELALVAAAVRKDVVRTDRGHPYFGGPEDGHPHLA
ALQALLTTFALGHPRLSYCQGMSDVAAPLLAVLDDEAQAFLCFCALMRRLAPRFRPGGRG
LSRAFAHLRRLLRRADPPFWAFLAARGAHDLLFCYRWLLLELKREFAFEDALRVLEVTWS
SLPPAPPPPERGVPLLGAPLRTRRGLQERRGMRPRPPRRRRRQQEGEDLTKVASGRGGDI
QEGPGSSSDVQSASKASMGVPEDPTSFGDNQEKPKSSSDIQGGSKSPTVFGDNQEKPKSS
SNIQDGSKGSVNIPEVPTSCGDDQEKLKSSSGVQGASKASTDIPEGPTSFGDNQEKPKSL
STIREGPESSRDIPSGFTSSGGFSEKPKVFGDVQPCPGSPWNNQEDPEVSQDTSGSAEVP
RGTRGDPEVSSSGGRDPGGSEDVRENPVVSKEIEPDPGGPEMVHGSASALEEMCEPSHVY
SGFRGDPGVPKKAGREPNACSDPRDTCQGHSISTKGREGADALEKVGRDRGVSRRIGGNP
QVSKEVREGPRETNKDSKEVTEVPKQVGEVPKVPREVDDTLKGFGHTPKGVSDTIKEIGD
AIKEVGESFKRFGGTVEEVGDAHKGVGDVPQELGDTPISPREVGEDPREVGDVPKGVGDP
PTSPRDAAEDPRQAGLQEGPDAPQDPWGGTWAWEDSSSSSSSCSSSSSEEELGLEDDGAP
LPPPAELGQGNPFLLFLCLAMLLEQRDAVMARAGDYNEVAMHFDRLVRRHQLPRVLHRAK
GLFARRWPQRWRSWWWRSRGASRGGPRGDPGAPAAAVLPVWCGTARGARTSSACTAWPPA
ACGGSRSCRGGWAMPAPPPSSTPSPATRAGQG
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggggggcggggtctgcgcggggggcggggccgggctggaggaggagtgc
gaagtggtgcgcgtgcgcgtcaagaagagcgaggggccgctgccgcccgagttccgctcg
ttcgctgtggacccgcagatcacgtctctggacgtgctgcagcacatcctcgcccgcgcc
ttcgacctgcaggggaagaaaagcttctccgtcagcttcgccacccgcgacccgcagggc
caggagacgttcgtgccgctgctgagcgatggggacctggcggccgccttcacctgcgcc
cggcccactctgcgcctgcgcatggacgtgcggcccccggctgagagcccgctgctggag
gactgggacatcatcagcccgcgggaggtggcagcagccgagccgctccccgagcgccgc
tcgctcctggcggccgcactgcccttcacacaggccctgctggcacaggtgggccggacg
ctggcgcgggcgcaggccgccctgtcctggcccgaggggtcccccccgtcccccccgcct
cccccctgcgccccgctgagcgacgccgacctgcgcacatacctgggccccggtgggcgg
ctgctgcggccgcatgacttgcgcctgcacgtctaccacggcggcgtggagcccggcctg
cgcaaggtggtgtggcggtacctgctgaacgtgttcccggcggggctgtccggccaggag
cgcctgtcccacctgcgcctcaaggctgccgagtatgcggcgctgaagacagctctggcc
gcacgtgccgctccggctgagctggcattggtggccgccgccgtgcgcaaggacgtggtg
cgcaccgaccgcgggcacccctacttcggcggccctgaggacgggcacccgcacctggcg
gcgctgcaggccctgctcaccaccttcgcgctgggccacccgcgcctctcctattgccag
ggcatgtcggacgtggcggccccgctgctggctgtgctggatgacgaggcgcaggccttc
ctctgcttctgtgctctcatgcgccggctggcgccgcggttccgccccggcggccgcggc
ctgtcccgcgccttcgcccacctgcgccggctgctccgccgcgccgacccacccttctgg
gccttcctggcggcgcgcggcgcccacgacctgttgttctgctaccgctggctgctgctg
gagctcaagcgcgagttcgccttcgaggatgcgctgcgtgtgctggaggtcacctggagc
tcgctgccccctgccccgccgccccccgaacggggggtcccgctgctgggggctccgctg
cgcacacgccgggggctgcaggagcgcagggggatgcggccacggccaccgcggcgacgg
cggcggcagcaggagggtgaggacctcactaaggtggccagtggtcgaggtggggacatc
caggagggtcccgggagctctagcgatgtccaaagcgcttctaaagcttccatgggtgtt
ccagaggatcccacgagcttcggtgacaaccaggagaagccaaagagctccagcgacatc
caaggtggttccaaatctcccaccgtctttggtgacaaccaggagaagccaaaaagctcc
agcaacatccaagatggttccaaaggttctgtgaacatcccagaggttcccaccagctgt
ggtgacgaccaggagaaactgaagagctccagcggcgtccaaggtgcttcaaaagcctcc
acagatatcccagagggtcccaccagctttggtgacaaccaggagaagccaaagagcttg
agcaccatccgagagggtcctgagagctccagggacatccccagtggcttcacgagctct
gggggtttcagcgagaagcccaaggtctttggggatgtccaaccttgtcccggcagcccc
tggaacaaccaagaggatcccgaggtctcccaggacaccagtggcagtgctgaggtcccc
aggggtacccgaggggaccccgaagtttccagcagtggtggccgagaccctggtggctcc
gaggatgtcagagaaaaccctgttgtctctaaggaaattgagccagaccctggtggtccc
gagatggtgcatggaagtgccagtgctcttgaggagatgtgtgaaccatcccatgtctac
tcggggtttcgtggagaccctggcgtccccaagaaggccggaagggaacccaatgcctgc
agtgaccccagggacacttgccaaggtcacagcatctctacgaagggacgtgaaggtgcc
gacgccttggagaaagtgggacgtgaccgtggtgtgtccaggaggattggaggaaacccc
caggtgtccaaagaggtgagagaaggccccagggagaccaacaaggactccaaagaggtc
actgaagtccccaaacaagtcggtgaagtccccaaggtgcccagagaagttgatgacacc
ctcaaggggtttgggcacacccccaaaggagttagtgacaccatcaaagagattggtgat
gccatcaaagaggttggtgaatccttcaaacggtttggtggcaccgtcgaagaggttggt
gatgcccataaaggggttggtgatgtcccccaagagcttggtgacacccctatctccccc
cgggaggtgggcgaagaccccagggaggttggtgatgtccccaaaggggtcggtgacccc
cccacatccccccgggacgccgctgaggaccccaggcaggcgggtctccaggagggtcca
gacgccccccaggacccctggggcggcacgtgggcctgggaggactcgtcctcttcctcg
tcctcgtgctcctcgtcctcctcggaggaggagctggggctggaggacgacggggcgccg
ctgccgccgcccgccgagctgggccaggggaacccgttcctgctgttcctgtgcctggcc
atgctgctggagcagcgcgacgccgtcatggcacgcgccggcgactacaacgaggtggcc
atgcacttcgaccgcctggtgcggcgtcaccagttgccgcgcgtcctgcaccgcgccaag
gggctcttcgccaggcgctggccacagcggtggcgcagctggtggtggcggagccggggg
gcgtcccggggagggccccggggggatcctggagcccccgcggctgcggtgttgcctgtc
tggtgcgggacagcgcgcggcgctcgtacttcatccgcatgtacagcctggcctccagca
gcctgtggtgggagcaggagctgcagggggggatgggctatgcctgccccacccccttct
tccacaccttcacctgccacgagggccgggcagggctga
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