Caloenas nicobarica (Nicobar pigeon): 135999953
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Entry
135999953 CDS
T11056
Symbol
MEF2D
Name
(RefSeq) myocyte-specific enhancer factor 2D isoform X1
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
135999953 (MEF2D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135999953 (MEF2D)
04131 Membrane trafficking [BR:
cnic04131
]
135999953 (MEF2D)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
135999953 (MEF2D)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
135999953 (MEF2D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
TFIIA
VPS13_N
FAM101
Spt20_SEP
CPSF100_C
Ig-CFAP74_2
CRF1
EOS1
eIF-3_zeta
Connexin
DUF7165
Piezo_TM1-24
PAT1
TERB2
Presenilin
Motif
Other DBs
NCBI-GeneID:
135999953
NCBI-ProteinID:
XP_065509602
LinkDB
All DBs
Position
31:complement(830168..911963)
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AA seq
523 aa
AA seq
DB search
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKG
SEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLS
PQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNG
SSLGKIIPAKSPPPPSHSTQLATNTRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGV
SQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGN
ISAWQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQQQPQQQHLVPVSLGNLIQGSHLS
HTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYE
GSSERDDPTRPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagatccagatccagcggatcacggacgagcgcaatcggcaggtgacc
ttcaccaagcgcaagttcggcttgatgaagaaagcgtacgagctgagcgtcctgtgcgac
tgcgagatcgccctcatcatcttcaaccactccaacaagctgttccagtacgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgagccccacgagagccggacc
aacgcggacatcatcgagacattaagaaagaaaggttttaatggctgtgacagcccggag
cccgacggcgatgactccatagaccagagccccttgatggaggataaataccgtaaaggc
agcgaggatctggatatcctgttcaagcgatacggttccgcagtgcccgcgcccaacttc
gccatgccggtgacggtgccggtgaccaaccaaaacacgctgcagttcagcaacccaggc
agctcgctggtgacccagtccctggtgacatcctcgctgacggacccccggctcctgtca
ccgcagcagccagcgctgcagaggaacacggtgtccccggggctgccgcagaggccggcc
agcgcaggggcgatgctcggaggagacctgaacaacacgaacggcgcctgccccagcccc
gtgggtaacggctacgtgagtgccagagcctctccggggctccttcccgtgtccaacggc
agcagcttgggcaagatcatcccggccaagtccccgccgccgccctcgcacagcacgcag
ctcgccaccaacactcgcaagccggatttacgtgtgatcacctcgcagagcgggaagggg
ttaatgcaccatttgacggaggatcacctggctctgcagaacacgcagcggttaggtgtc
tcccaagcaactcactctttaactacgccagttgtgtctgtggctactccgagtctgctg
acgcaggggctgccgttctctgccatgcccacagcctacaacacagattatcagctgacg
agcgctgagttgtcctcgctgccagcgttcagctcgccgggggggttgtcccttggcaac
atctctgcctggcagcagcagcagcagcagcagcagcaacagcagcaacaacaacaacag
caacagcagcagcaacagcagcagcaacaaccgcagcagccgcagcagcaacagcagccg
cagcagcagcacctggttcctgtatcactaggaaatttaatacaagggagtcacttgtcc
cacaccaccactttgactgtcaacaccaaccccaacatcagcatcaagtcagagcccgtc
tcgcccaaccgggaacgaaacactgccaccccgctcagcaccttcccccaccagccccgg
cacgagcccaccggccgctcgcccgtcgacagcctcagcagcaacaccagctcctacgaa
ggcagcagcgagcgggacgatcccacccgccccgatttcggctcatccctgggcctcctg
cgacccaccagcgagcccgagggggagagcccctccgtaaagcgcatgcggttggatacc
tgggtcacataa
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