Caloenas nicobarica (Nicobar pigeon): 136000076
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Entry
136000076 CDS
T11056
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136000076 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
136000076 (VPS45)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
136000076 (VPS45)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
136000076
NCBI-ProteinID:
XP_065509826
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Position
31:complement(2548816..2564827)
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AA seq
570 aa
AA seq
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MDAVLAVKQYVSKMIEDSGPGMKVLLMDRETTGAVSMVYTQSEILQREVYLFERLDSANR
EPMKHLKAICFLRPTKENVEFLIQELRRPKYSIYFIYFSNVISKSDVKALAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNLLGCCQGRHWDPAQLSRSTQGLTALLLSLKKCPMIRYQLS
SEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQRRKPK
EQQKLESIADMKAFVENYPQFRKMSGTVSKHVTVVGELSRLVAERNLLEVSEVEQELACQ
NDHSSALQNVRRLLRNPRVTELDAARLVMLYALHYERHSSNSLPGLLTELKNRGVADKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLHETLDQLIKG
KLRDSQFPYLGPNTLRDRPQDIIVFIIGGATYEEALTVYNLNRSTAGVRIVLGGTTIHNT
RSFLEEVTASGFRGRATESSQAPLRSSSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtgctggccgtcaagcagtacgtgtccaagatgatcgaggacagcgggccc
ggcatgaaggttctcctcatggaccgggagacgaccggcgcggtgagcatggtgtacacc
cagtccgagatcctgcagagggaggtttacctgttcgagcgcctggactccgccaacagg
gagcccatgaagcacctgaaggccatctgcttcctgcggcccaccaaggagaacgtggag
ttcctcattcaggagctgcggaggccaaagtacagcatctattttatttatttcagcaac
gtgatcagcaagagtgacgtgaaggcgctggctgaggctgatgagcaggaagtcgtggct
gaagttcaggagttctacggcgattacatcgcggtgaatccacacgtgttttctctcaac
ctcttgggctgctgccagggccggcactgggacccggcgcagctgtccaggagcacgcag
ggactgaccgcgctgctgctgtccctcaagaagtgccccatgatccggtaccagctctcc
tccgagcccgccaagcgcctggccgagtgcgtgaagcaagtgatcactaaggagtacgag
ctgtttgactttcggcgcacggaggttcctccgttgctgctcatcctggatcgctctgat
gacgccatcacccccttgctgaaccagtggacgtaccaggcgatggtccacgagctgctg
gggattaacaacaaccgcatcgacctctcgcgggtgccggggatcagcaaggacctgcga
gaggtggttctgtccgccgagaacgacgagttctacgccaacaacatgtacctgaacttc
gcggagatcggcagcaacatcaagaacctgatggaggatttccagaggaggaagcccaag
gagcagcagaagctggaatccattgcggatatgaaggcgttcgtggagaactacccgcag
ttcaggaagatgtcgggcacggtgtccaagcacgtgacggtggtgggcgagctctcgcgc
ctggtcgccgagcggaacctgctggaggtgtcggaggtggagcaggagctggcctgtcag
aacgaccattccagcgccctccagaacgtgcggcggctgctgcggaacccgcgggtgacg
gagctggacgcggcgcggctggtgatgctctacgcgctgcactacgagcggcacagcagc
aacagcctccctgggctgctcaccgagctcaagaaccgcggcgtggccgacaaataccga
aagctcgtgtcggccgtcgtggagtacggagggaaacgggtccggggcagcgacctgttc
agtcccaaggacgccgtggccatcaccaaacagttcctcaaaggactgaagggcgttgag
aacgtgtacacgcagcaccagccgctgctgcacgagacgctggaccagctcatcaagggg
aagctccgggacagccagttcccctacctggggcccaacacgctccgcgacaggccgcag
gacatcatcgtcttcatcatcgggggggcgacgtacgaagaggcgctgaccgtgtacaac
ctgaaccgcagcaccgcgggcgtgcgcatcgtgctgggcggcaccaccatccacaacacc
aggagcttcctggaggaggtgacggcttctgggttccgcggccgcgccaccgagagctcc
caagcgccgctgcggtcgagcagcagacggtga
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