Caloenas nicobarica (Nicobar pigeon): 136000092
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Entry
136000092 CDS
T11056
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
136000092 (NCSTN)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
136000092
NCBI-ProteinID:
XP_065509848
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Position
31:3242041..3270437
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AA seq
715 aa
AA seq
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MAVAGRAGGRRRMEAATGSCWTPFPAWWGLLLAVLAAGSCQGNSVERKIYIPLNKTAPCV
RLLNATHQVGCQSSISGDMGVIHVVEKEEDLKWVLADGPHPPYMILLDGNLFNRRVILQL
KGTSRVSGLAVTMAKPNPPQGFSPGLKCPNDGFGVYSKDYGPEFAHCNRTLWNPVGSGLS
YEDFDFPIFLLEDANETQVIKQCYQDHNVPRGGSGPEYPLCAMQLFSHMHAVTSTVTCMR
RSSLQSTFSINPEVVCDPLLDYNVWSTLQPINSSGKVDPEKEVIIVATRIDSHSFFWNIA
PGAESAVSSFVTHLAAAEALHKLSDVHLLQRNIMFTFFQGETFDYIGSSRMVYDMEKDKF
PLRLDNIHSFVELNQVALRNGSTLWMHTDPVSRMNESVQVQIKNLLDILSSSSMGANVSL
QEVGYSQPLPPSSFQRFLRAQHIPGVVLTDHQTAFQNRYYQSMYDTPENIRMQYPEGLSP
EETLEYVTDTAKSLAEVATVVARALYRLAGGANNTSAIQADPKTVSRMLYGFLIKMNNSW
FQSIIKPDLKGILGEVPQHYVAVSSPVNTTYLVQYVLANLTGTVVNLTKEECLNPEKTPN
SEKEMYEYAWVQGSLDPNSTSRVPYCVRSTVHLSKALSPAFELRQWGSTEYSTWTESRWK
EIRARIFLVASKELEIITLVVGIAILIISLLATYFINAKADVLFSIPRDPGAVAY
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggggagagccgggggccggcggcggatggaggccgctactgggagctgc
tggaccccgttcccggcctggtgggggctgctgctcgccgtgcttgcagcgggctcctgc
cagggtaactcggtggagaggaagatctacatccccttgaacaaaactgcaccgtgtgtt
cgcctcctgaatgccacccaccaggtcggctgccagtcctccatcagtggagacatgggg
gtgatccacgtggttgagaaggaggaagacctgaagtgggtgcttgctgatggccctcac
ccaccctacatgatactgctggatgggaacctcttcaacaggagggtgatactgcagctg
aagggaacctcccgggtctcaggccttgctgtgaccatggccaaacccaaccctccccag
ggcttctctcctggtttgaagtgccccaatgatgggtttggtgtctattccaaagattac
ggccctgagtttgcacactgcaacaggactctgtggaaccctgtgggcagtgggctgtca
tatgaggattttgacttccctatttttctccttgaagacgccaatgagactcaagttatt
aagcagtgctatcaagatcataatgtccctcgcggtggatcaggccccgagtaccctctc
tgtgccatgcagcttttttctcacatgcacgctgtcactagcaccgtcacctgcatgagg
cgcagctccctccaaagcaccttcagcatcaatccagaggttgtgtgtgatcctctgctt
gattacaatgtctggagcaccttgcaacctatcaattcctctggaaaagttgatcccgag
aaggaagttattattgttgctacgcgaatcgacagccattccttcttctggaacattgca
cctggggcagagagcgctgtctcttccttcgtcacccacttggctgctgctgaagccctt
cataaactgtcagatgttcatttgctgcaaaggaatatcatgttcaccttcttccaaggg
gagacctttgattacatcggcagctcccgaatggtgtatgatatggaaaaagacaagttt
cctctccgcttggacaacattcattcatttgtggagttgaatcaggtggctctaaggaat
ggctcaactttatggatgcatacagaccctgtctctcgaatgaatgaatctgttcaagtg
cagattaagaacttgctagatattctgagtagcagcagcatgggagcaaatgtgagtttg
caggaagttggatattcgcagcctcttcccccatcttccttccagcgcttccttcgggcc
cagcacatccccggcgtggtcctgactgaccaccagacagctttccagaacagatactac
cagagcatgtacgacactccagagaacatccggatgcaatatcccgaggggctcagcccc
gaggagaccttggagtatgtcacggacacagccaagtccctggcagaagttgccacagtg
gtcgcccgtgccctctaccggcttgcaggaggagccaacaacacctctgctattcaggca
gatccaaaaacggtctctcgaatgctgtatgggtttctgattaaaatgaacaattcctgg
tttcagtccatcattaaaccagacttaaaaggaattctgggtgaagttccccaacactac
gtcgccgtttccagccctgtgaacaccacctaccttgtgcagtacgtcctagccaacctc
acaggcactgttgtgaacctcaccaaggaagagtgtctgaaccctgaaaaaacacccaac
agtgagaaggaaatgtatgaatatgcctgggtgcagggttccctggaccctaactcaaca
tcgcgagtcccctactgtgttcggtcaaccgttcacctaagcaaagcgctctctcctgcc
ttcgagctgagacagtggggatctacagagtactccacgtggacagagagtcggtggaaa
gagatccgtgcccgaatatttctggtagccagcaaggagctagagataatcactttggtt
gtgggcattgccattctgatcatctctctcctcgccacatattttatcaacgccaaagcg
gatgtgctttttagcatcccacgggaccctggggctgtggcttactga
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