Caloenas nicobarica (Nicobar pigeon): 136000113
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Entry
136000113 CDS
T11056
Name
(RefSeq) hyaluronidase-1-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00531
Glycosaminoglycan degradation
cnic01100
Metabolic pathways
cnic04142
Lysosome
Module
cnic_M00076
Dermatan sulfate degradation
cnic_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
136000113
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
136000113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cnic02042
]
136000113
00536 Glycosaminoglycan binding proteins [BR:
cnic00536
]
136000113
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cnic00537
]
136000113
Enzymes [BR:
cnic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
136000113
Bacterial toxins [BR:
cnic02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
136000113
Glycosaminoglycan binding proteins [BR:
cnic00536
]
Heparan sulfate / Heparin
Enzymes
136000113
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cnic00537
]
Enzymes
136000113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
EGF_DL_JAG
JAG1-like_EGF2
EGF
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
136000113
NCBI-ProteinID:
XP_065509880
LinkDB
All DBs
Position
1:complement(24453258..24462827)
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AA seq
477 aa
AA seq
DB search
MDVWVKWSALAALLAVVKAQLPKPTRVPLVLHKPFVVVWNAPTEQCRLRYKVDLDLSVFD
IASNTNETLSGSNVTIFYHTHLGYYPYYSDNGDPVNGGVPQNESLIKHLNKAKSDIDYCI
PMKKFQGLAVIDWENWRPQWDRNWGNKSIYRNKSLEMVRRRHPQWSEDKIRKMAKEEFEN
AGKSFMNNTILLAEHMRPNGLWGYYLYPDCYNYDYKEHPQRYTGKCPAIESSRNDLLLWL
WKESTALYPSIYLDYILKSSPNALKFVHYRVKEAIRVASIARKDYVLPVFVYSRPFYAYT
FHVLTETDLVNTIGESAALGAAGVVLWGSMQYASSKESCSTVKRYIDGPLGHYVINVTSA
AKLCSKVLCKKNGRCIRKNSDSSAYLHLSPTNFKIQARHSDRGPRFQVTGEPSLESIEAM
RQRFMCQCYQGWTGIFCELPDQNLVERWAHIVFSRSRKQKLYVFLLGVTQLLLHTTH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttgggtcaaatggtcagcactggcggcgctgcttgctgtggtcaaggctcag
ctgccgaagccaacacgagtccctctggttctgcacaagcctttcgtggttgtttggaat
gcgccgaccgagcagtgcaggctacggtacaaggtggacctggatctcagtgtttttgac
attgcatccaacactaatgagactttgagtggatccaatgtgacaatcttctatcacaca
catttgggatactacccctactattcagataatggagatcctgtcaatggaggggtaccc
caaaatgaaagtcttatcaaacaccttaataaagcaaagtctgacatcgactattgcata
cccatgaagaaatttcagggacttgcagtcattgactgggaaaactggaggccccagtgg
gataggaactggggcaataaaagcatttatagaaataaatctcttgagatggttaggaga
cggcatcctcagtggtcagaagataaaattaggaaaatggctaaagaggaatttgaaaat
gctggcaagagtttcatgaacaacactatccttttggctgagcatatgagaccaaatggt
ttgtggggttactatctttacccagactgctacaattatgattacaaagaacacccccaa
agatacacggggaaatgtccagccattgagtcttcccgcaatgacctcctgctttggctg
tggaaggaaagcactgctctctacccttctatatacctggattatatactgaagtcaagt
ccaaatgcactcaaatttgttcactatcgggttaaggaggcaatacgtgttgcctcaatt
gctagaaaagactatgttttgcctgtgtttgtttactccagaccattttatgcctatact
tttcatgttttaacagagacagatctggtcaataccattggtgaaagtgcagctttggga
gcagctggagttgttctctgggggagtatgcaatatgccagctcaaaggagagctgttca
actgtgaaacggtacattgatggaccgttaggacattacgtcattaatgtgacctcagca
gccaaactctgtagcaaagtcctgtgcaagaagaatggaagatgtattcgcaaaaatagc
gactcttctgcttacctccatttgtcacccactaattttaagatccaagcccgtcactca
gacaggggccccagattccaggtgaccggtgaacccagcctggagagtattgaagccatg
aggcagagattcatgtgtcagtgttaccagggctggacaggaatattttgtgaattgcct
gaccaaaatctagtggagcgctgggctcacattgtgttcagtagatcaagaaaacaaaag
ctttatgtcttcctcttaggagtcacacagcttctacttcataccactcactaa
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