Caloenas nicobarica (Nicobar pigeon): 136000167
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Entry
136000167 CDS
T11056
Name
(RefSeq) LOW QUALITY PROTEIN: signaling lymphocytic activation molecule-like
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cnic04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
136000167
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136000167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
136000167
04090 CD molecules [BR:
cnic04090
]
136000167
Cell adhesion molecules [BR:
cnic04515
]
Immunoglobulin superfamily
SLAM/CD2 family
136000167
CD molecules [BR:
cnic04090
]
Proteins
136000167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
V-set
Motif
Other DBs
NCBI-GeneID:
136000167
NCBI-ProteinID:
XP_065509967
LinkDB
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Position
31:complement(3309258..3315281)
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AA seq
411 aa
AA seq
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MDCSAGLWLLISLGCLWDTGRGVRETVLGTLGKASILRVPPELQNLTLRFGTAMWKRDTE
DPQRKLVLLKYLGGNYTNYMQGRTRFHELDFSLEILNTSRQDRQLYEYIVSKESEEKVWQ
IQLEVYEPVSDPSIQILSWELANGSCTITVNCTAERGDNVSYSWEGWDAGTWGLCSHNGS
LLHLSYPLQNSSIACACTARNPISRGVVPFKSSECSYEQGGSTGLRPEHLVLMVVVPIAL
VVVLTVAFIVAHLATPVAGQEQEQLSPTEDSTVHTIYSQVQRVEVCGTLHDGFXPLGVNT
APWLVREQSCSVQTRDDMGVEGEKSSCSKLAAAAHPSLSTQKQKEVPTAEHASCTTIYAA
ATGLPPDTVPAPSRALRPVCTLSAEPPSLSQTPSPDVEPKTVYASVMRPMV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggactgcagcgcggggctctggctgctgatctctctcggctgtctttgggacacgggc
cgtggagtgagggagacagtgctgggcaccttggggaaggcgtcaatcttgcgggtaccc
cctgaactccagaacctcaccttgcgcttcgggacagccatgtggaagcgggacacagag
gacccacagaggaagctcgttctgctcaagtacttgggtggcaactacaccaactacatg
cagggacggactcgcttccacgagttagatttctccctggagatcctgaataccagtcgg
caggacaggcagctctatgagtacattgtcagcaaggagtcggaggagaaagtctggcag
atacagctggaggtgtacgagccggtgtctgatcccagcatccagatcctcagctgggag
ctggccaacggcagctgcaccatcaccgtcaactgcacggcagagcgaggggacaatgtc
tcctacagctgggaaggctgggatgccggcacctgggggctctgcagccacaatggcagc
ctcctgcacctctcctaccccctgcagaactccagcatcgcctgcgcctgcacagccaga
aaccctatcagcaggggtgttgttcccttcaagtcctccgaatgcagctacgagcaaggg
ggcagcactgggctgaggccggagcacctcgtgctgatggtggtggtgcccatcgcctta
gtggtggtgttgactgtggctttcattgtcgcccatttggccacacctgttgctggccag
gagcaggagcaattgtcacccaccgaggacagcacagtgcacaccatctactcccaagtg
cagcgggtggaggtctgtggcaccctccatgatgggttttgaccgctgggtgtcaacaca
gccccatggctggtgagggaacagtcctgctcagtgcaaaccagggacgacatgggggtg
gagggagaaaagagctcctgtagcaagctggctgccgctgctcatccttcactctccacg
cagaagcagaaagaagtccccactgctgagcacgcctcctgcaccaccatctacgctgcg
gccactggtctgcccccagacaccgtcccggctcccagcagagccctgcgccctgtgtgc
accctctcagcagagccaccctccctctcgcagacaccaagccctgacgtggagcccaag
acagtttatgccagcgttatgaggcccatggtctga
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