Caloenas nicobarica (Nicobar pigeon): 136000271
Help
Entry
136000271 CDS
T11056
Symbol
STX5
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-5
KO
K08490
syntaxin 5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04130
SNARE interactions in vesicular transport
Brite
Membrane trafficking [BR:
cnic04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
136000271 (STX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF16
Apolipoprotein
DUF2207_C
Syntaxin
DUF6746
Vac_Fusion
Spectrin
DUF3130
HpHbR
DUF5063
Prominin
DUF3450
MCPsignal
HsbA
Motif
Other DBs
NCBI-GeneID:
136000271
NCBI-ProteinID:
XP_065510122
LinkDB
All DBs
Position
32:411892..416342
Genome browser
AA seq
310 aa
AA seq
DB search
MGGRWAPPVGEEGEGGGGSPVQDSEAGGGTGTDRNGDTLSAPHPVPRRIGKDLSNTFAKL
EKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDVVRARGGQSGRHVQSHS
NTVVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREHFSRAPVSALPLAAGNLGECRDL
GWGGLLHGAADEPQRGGAVAIEMDARTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGS
IFQQLAHMVKEQEETIQRIDASVEDAQLNVEAAHGEILKYFQSVTSNRWLMVKIFLILIV
FFIVFVVFLA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggagggagatgggctcctcctgtgggcgaggaaggggagggcggtggggggtcccca
gtgcaggacagcgaggcggggggggggacggggacggacaggaacggggacaccctgagc
gccccccaccccgtccccaggcgcatcgggaaggacctgagcaacacgttcgccaaactg
gagaagctgacgatcttggccaagagaaagtcgcttttcgacgacaaagccgtggagatc
gaggagctgacgtacatcatcaagcaggacatcaacagcctgaacaagcagatcgcgcag
ctgcaggacgtggttcgggcgcgggggggccagagcgggcggcacgtccagagccactcg
aacacggtcgtggtgtcgctgcagtccaaactggcctccatgtccaacgatttcaaatcg
gtgctggaagtgcggacagagaacctgaagcagcagcgaagccgccgtgagcatttctcc
cgcgcccccgtctccgctttacccctcgctgccggcaacctgggtgagtgccgggatttg
gggtgggggggtctgctccacggtgctgcagacgagccgcagcgcgggggggccgtggcc
attgagatggacgcgcggaccagccaacagctgcagctgatcgacgagcaggattcctac
atccagagccgggcggacacgatgcagaacatcgaatccaccatcgtggagttgggctcc
atcttccagcaactggcgcacatggtgaaggagcaggaggagacgatccagaggatcgac
gccagcgtggaggacgcgcagctgaacgtggaggcggcgcacggcgagatcctcaagtat
ttccagtcggtcacgtccaaccggtggctgatggtcaagatcttcctcatcctcatcgtc
ttcttcatcgtcttcgtcgtcttcctggcctga
DBGET
integrated database retrieval system
